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The map label for this gene is 116623246

Identifier: 116623246

GI number: 116623246

Start: 5268180

End: 5269661

Strand: Reverse

Name: 116623246

Synonym: Acid_4153

Alternate gene names: NA

Gene position: 5269661-5268180 (Counterclockwise)

Preceding gene: 116623248

Following gene: 116623245

Centisome position: 52.88

GC content: 66.33

Gene sequence:

>1482_bases
TTGCAAAGCCGCAAAGTAACGCCAAGAAAACTTAGACCCCTTCTTCTTCTTGGCGTTACTCTGCGGCTCTGCGGCTCTGC
GAGAAACATGCACCCTCATGCTGCCGTGTCACCTCCTCCACGGAATCTGCATCCCCCATTCAGATCCTTTACTATGAGAC
TTCTTCTCTTCCTGCTCGCCATCCCGCTCGCCGCCCAGGAACCGCTCTCTCTCCGCGACGCCGTCCGCCTCGCCGTCCGC
GAGAACAAAGCCCTCTCCGCCACCGGATCCGCGCTCTCCGCCTCCGAGGCCCGCATCGCCCAGGCCCGCGCCGGCATGCT
CCCCAAGATCAACTACACCGAGTCCTTCTCCCGCAGCGACAACCCAGTCTTCGTCTTCGGCTCCCTCCTCACCCAGCACC
AGTTCGGCCCCGAAAACTTCGCCATCGATACCCTCAACCGCCCCGCATTCCTCAACAACTTCCAGTCCCTGCTCACCCTC
GACCAGATCCTCTATGACGCCCGCCAGACCCGCAATTCCGTCAGCTCCGCCGTCCTCCTCCACCAGATGTCCGCCGAGGA
CCAGCGCCGCGTCCGCATGGACGTCATCGCCGCCACCGCCCGCGCCTACTACGACGCCGTCCTCGCCGCCGAGATGCTCG
CCGCCGCTGCCCAGTCCGTCCGCTCCGCCACCGCCGACCTCAACCGCGCCAACGACGTCCGCACTGCCGGCATGTCCACC
GACGCCGACGTCCTCTCCATCCGCGTCCACCTCGCCGCCGTCACTGAACAGCGCATCGCCCGCGCCGCCGATCTCGACAT
CGCCAGATCCGCCCTCAACGATTCGCTCGGCCTCCCCCTCGACACGCCCCACACTCTCACCACCGCGCTCACCGCCCTTG
ATCTCCCCGATCTCGCGCTCGACACCCTCGAGTCCTCCGCCTCCTCTGCCCGCCCGGAAGCCCTCGCCTCGCGGTTTGCG
ACCACCCTCGCCCAAACTCAGGCCGACACCGCCCGCTCCGCCATGCTCCCTCAAGTCGGTTTCCACGCCGCCTTCGAAGC
CGATCGACAACGCTTCGTGACCCGCGGCGGCGCCAACTGGCTCGCCGCCATCTCCCTCCGCTGGAATCTCTTCAACGGTT
CCGCCGACAAGGCCCGCATCGCCGAGACCTCCCACCTCGTACAGCGCGCCGCCGCTGATCAGCAGCGCGCCGATTCCGCC
ATTCACCTTCAAGTCCGCCGCGCCTTCGCCGCGCTCAAAGCCGCCCAGCAGCGCATCGAAGTGGCCCGCGCCGCAGTGGA
CGAAGCCGCTGAGAGCCTGCGCATCACCCAGAACCGCTACGCAGCCGGAATGAATAACGTGACCGATCTCCTCCGCACCG
AAACCGCCGTCCTCGAAAGCCGTACTCACTATCTCGCCGCCATCCACGATCAGCGCGTCGCGGCCACCATGCTCGAACTT
GCCGCGGGACGCCTCAATGCCGATTCGGAGGCCCTCAACTAA

Upstream 100 bases:

>100_bases
TGACCTCCTGCCTTTTCTTCTTGGCGTCACTTTGCGGCTCTGCGAGAAACATGCACCCTCATGCTGCGGTGTCACCTCCT
CCCCGTAAGGGTCGTTTTTC

Downstream 100 bases:

>100_bases
TGACTCGATATCTCACCCTTCTCCCTGTCCTGCTTCTCGCCTCCTGCGGCGGCGATCCGCCCCATCCGGCCATCGCGCTA
CAACCCGCGCCCGTCCCCGT

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Protein

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MQSRKVTPRKLRPLLLLGVTLRLCGSARNMHPHAAVSPPPRNLHPPFRSFTMRLLLFLLAIPLAAQEPLSLRDAVRLAVR
ENKALSATGSALSASEARIAQARAGMLPKINYTESFSRSDNPVFVFGSLLTQHQFGPENFAIDTLNRPAFLNNFQSLLTL
DQILYDARQTRNSVSSAVLLHQMSAEDQRRVRMDVIAATARAYYDAVLAAEMLAAAAQSVRSATADLNRANDVRTAGMST
DADVLSIRVHLAAVTEQRIARAADLDIARSALNDSLGLPLDTPHTLTTALTALDLPDLALDTLESSASSARPEALASRFA
TTLAQTQADTARSAMLPQVGFHAAFEADRQRFVTRGGANWLAAISLRWNLFNGSADKARIAETSHLVQRAAADQQRADSA
IHLQVRRAFAALKAAQQRIEVARAAVDEAAESLRITQNRYAAGMNNVTDLLRTETAVLESRTHYLAAIHDQRVAATMLEL
AAGRLNADSEALN

Sequences:

>Translated_493_residues
MQSRKVTPRKLRPLLLLGVTLRLCGSARNMHPHAAVSPPPRNLHPPFRSFTMRLLLFLLAIPLAAQEPLSLRDAVRLAVR
ENKALSATGSALSASEARIAQARAGMLPKINYTESFSRSDNPVFVFGSLLTQHQFGPENFAIDTLNRPAFLNNFQSLLTL
DQILYDARQTRNSVSSAVLLHQMSAEDQRRVRMDVIAATARAYYDAVLAAEMLAAAAQSVRSATADLNRANDVRTAGMST
DADVLSIRVHLAAVTEQRIARAADLDIARSALNDSLGLPLDTPHTLTTALTALDLPDLALDTLESSASSARPEALASRFA
TTLAQTQADTARSAMLPQVGFHAAFEADRQRFVTRGGANWLAAISLRWNLFNGSADKARIAETSHLVQRAAADQQRADSA
IHLQVRRAFAALKAAQQRIEVARAAVDEAAESLRITQNRYAAGMNNVTDLLRTETAVLESRTHYLAAIHDQRVAATMLEL
AAGRLNADSEALN
>Mature_493_residues
MQSRKVTPRKLRPLLLLGVTLRLCGSARNMHPHAAVSPPPRNLHPPFRSFTMRLLLFLLAIPLAAQEPLSLRDAVRLAVR
ENKALSATGSALSASEARIAQARAGMLPKINYTESFSRSDNPVFVFGSLLTQHQFGPENFAIDTLNRPAFLNNFQSLLTL
DQILYDARQTRNSVSSAVLLHQMSAEDQRRVRMDVIAATARAYYDAVLAAEMLAAAAQSVRSATADLNRANDVRTAGMST
DADVLSIRVHLAAVTEQRIARAADLDIARSALNDSLGLPLDTPHTLTTALTALDLPDLALDTLESSASSARPEALASRFA
TTLAQTQADTARSAMLPQVGFHAAFEADRQRFVTRGGANWLAAISLRWNLFNGSADKARIAETSHLVQRAAADQQRADSA
IHLQVRRAFAALKAAQQRIEVARAAVDEAAESLRITQNRYAAGMNNVTDLLRTETAVLESRTHYLAAIHDQRVAATMLEL
AAGRLNADSEALN

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53529; Mature: 53529

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSRKVTPRKLRPLLLLGVTLRLCGSARNMHPHAAVSPPPRNLHPPFRSFTMRLLLFLLA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
IPLAAQEPLSLRDAVRLAVRENKALSATGSALSASEARIAQARAGMLPKINYTESFSRSD
HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NPVFVFGSLLTQHQFGPENFAIDTLNRPAFLNNFQSLLTLDQILYDARQTRNSVSSAVLL
CCEEEEHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQMSAEDQRRVRMDVIAATARAYYDAVLAAEMLAAAAQSVRSATADLNRANDVRTAGMST
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
DADVLSIRVHLAAVTEQRIARAADLDIARSALNDSLGLPLDTPHTLTTALTALDLPDLAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHH
DTLESSASSARPEALASRFATTLAQTQADTARSAMLPQVGFHAAFEADRQRFVTRGGANW
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCE
LAAISLRWNLFNGSADKARIAETSHLVQRAAADQQRADSAIHLQVRRAFAALKAAQQRIE
EEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VARAAVDEAAESLRITQNRYAAGMNNVTDLLRTETAVLESRTHYLAAIHDQRVAATMLEL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGRLNADSEALN
HHCCCCCCHHCCC
>Mature Secondary Structure
MQSRKVTPRKLRPLLLLGVTLRLCGSARNMHPHAAVSPPPRNLHPPFRSFTMRLLLFLLA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
IPLAAQEPLSLRDAVRLAVRENKALSATGSALSASEARIAQARAGMLPKINYTESFSRSD
HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NPVFVFGSLLTQHQFGPENFAIDTLNRPAFLNNFQSLLTLDQILYDARQTRNSVSSAVLL
CCEEEEHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQMSAEDQRRVRMDVIAATARAYYDAVLAAEMLAAAAQSVRSATADLNRANDVRTAGMST
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
DADVLSIRVHLAAVTEQRIARAADLDIARSALNDSLGLPLDTPHTLTTALTALDLPDLAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHH
DTLESSASSARPEALASRFATTLAQTQADTARSAMLPQVGFHAAFEADRQRFVTRGGANW
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCE
LAAISLRWNLFNGSADKARIAETSHLVQRAAADQQRADSAIHLQVRRAFAALKAAQQRIE
EEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VARAAVDEAAESLRITQNRYAAGMNNVTDLLRTETAVLESRTHYLAAIHDQRVAATMLEL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGRLNADSEALN
HHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA