| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623202
Identifier: 116623202
GI number: 116623202
Start: 5221072
End: 5222439
Strand: Direct
Name: 116623202
Synonym: Acid_4109
Alternate gene names: NA
Gene position: 5221072-5222439 (Clockwise)
Preceding gene: 116623201
Following gene: 116623203
Centisome position: 52.39
GC content: 58.55
Gene sequence:
>1368_bases ATGCAGAACATCAACCGGGAGCATCCGGAGTACATCGCGCGCAAGGCGATGTGGAAGCAATATAAGGACCTCTACGCGGG CGGCGAGCGGCTACGGATGAGCGCGTCGGAATACCTGGTGCGGCGCCACAAGGAACCGGGGGAGGTTTATCAGGAGCGGC TGAGCCGCGTGTTCTACGAGAACTATGTCGGTTCGATCGTTGACTGGTATGCGGCGACCCTGATGCGGCGCGAACCCATG CTGCAGTTCGAGGGAAACGACGCAGGAGCGAAGACGTTCTACAGCGTGTTCTCGGAAGACTGCGACTTGAAGGGCACGAA CCTTCACGAGTTCTTCCGTCAGCGGTTCACGCAGACGATGGTCTGCGGGAGCAGTTACGTAGTGGTGGACTTCCCACGGG CTACGGGGCCGGCGCTGAATCGCGCCGAGGAAGACGCAAGCGGAAGGTCTCGGGCGTATCTCACGGATTACTCGGCGGAC GAAGTTATCAACTGGAATTACGACCCTTCGAGCGGGTTGGACTGGGTGGTGATCCGGACCAGCTGCCTGAAGCAATCGAA GGTGACGGACGCGAAATGGGAGAAGGAGACACGGTGGATCTATTATGACCGCGAAAACTACCAGGTATATCGGAAGGCCG GAGAGGGGCAGGAAATCGAGCTGATTGACGAAGGTCGTCACGGGCTCGCCGGCCTGCACCGGGTGCCGGTATTCGAGATG AAGGTCTCAGAGGGATTGTGGCTGGTAAACAAGGCTGCACTATTGCAGCTCGAGCATTTCAACAAATCCAACGCACTCTC CTGGGCACTGACGATGGGACTGTTTGCGACTCCGGTGATCTATTCGGAGCGTGAGTGGAACCAGATTGTGGGCGAGAGCT ACTACATACAGCTCGCTCCCGGCGACCGGTTCGGCTGGACGGAGCCGGAGGGCAAGGTTTATCAGATAGCGGCGGACAAC CTGGTCCGGTTAAAGGACGAAATCTACCGCGTCTGCTACCTGATGAACCAGGCCGGATCGGGAACCGGCGACCAGCGCAT GAGCGGCCTGTCGAAAGAGCGTGATTTCAGCGTGACGCAAGAGGTGCTACGGGCCTACGGCGATGCGGTGAAAGACACGA TGAAACAGGTGCTGAAAGCGGTGGCGGAGGCACGGCAGGATGGAGTGTCGATCGATGTTCTAGGGATGGACGAATTCGAC ATCGGCGACTTCAGCAACGAATTAGACGATGCCCGGAAGCTGCTGGACCTGGGCATCGCATCGGACACGCTGAAGAAGCA GATCTTCAAACGGCTGGCGTTCAAGTATCTTTGCGACGCGCGGCAGGAGATCAAGAACCGGGTCGCGGAAGAGATCGACC GGGAATGA
Upstream 100 bases:
>100_bases CTGCAGGCACGATTGCCTGCCCCACAGCGCGGCGAGCCGCAAACTGAGTCGCGAACTCGGCGAGAGATGGCATTAGAACA GGAACGACAGCAGGAGAACT
Downstream 100 bases:
>100_bases GGCGGTAAGGGGCCGGCCGGCGGTAAGAGCACCGGCGGGCCGAGAAATTGGGAGGTATATGGAAGGCATCGACATTCAGG CGATTGTACGGCAAGCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MQNINREHPEYIARKAMWKQYKDLYAGGERLRMSASEYLVRRHKEPGEVYQERLSRVFYENYVGSIVDWYAATLMRREPM LQFEGNDAGAKTFYSVFSEDCDLKGTNLHEFFRQRFTQTMVCGSSYVVVDFPRATGPALNRAEEDASGRSRAYLTDYSAD EVINWNYDPSSGLDWVVIRTSCLKQSKVTDAKWEKETRWIYYDRENYQVYRKAGEGQEIELIDEGRHGLAGLHRVPVFEM KVSEGLWLVNKAALLQLEHFNKSNALSWALTMGLFATPVIYSEREWNQIVGESYYIQLAPGDRFGWTEPEGKVYQIAADN LVRLKDEIYRVCYLMNQAGSGTGDQRMSGLSKERDFSVTQEVLRAYGDAVKDTMKQVLKAVAEARQDGVSIDVLGMDEFD IGDFSNELDDARKLLDLGIASDTLKKQIFKRLAFKYLCDARQEIKNRVAEEIDRE
Sequences:
>Translated_455_residues MQNINREHPEYIARKAMWKQYKDLYAGGERLRMSASEYLVRRHKEPGEVYQERLSRVFYENYVGSIVDWYAATLMRREPM LQFEGNDAGAKTFYSVFSEDCDLKGTNLHEFFRQRFTQTMVCGSSYVVVDFPRATGPALNRAEEDASGRSRAYLTDYSAD EVINWNYDPSSGLDWVVIRTSCLKQSKVTDAKWEKETRWIYYDRENYQVYRKAGEGQEIELIDEGRHGLAGLHRVPVFEM KVSEGLWLVNKAALLQLEHFNKSNALSWALTMGLFATPVIYSEREWNQIVGESYYIQLAPGDRFGWTEPEGKVYQIAADN LVRLKDEIYRVCYLMNQAGSGTGDQRMSGLSKERDFSVTQEVLRAYGDAVKDTMKQVLKAVAEARQDGVSIDVLGMDEFD IGDFSNELDDARKLLDLGIASDTLKKQIFKRLAFKYLCDARQEIKNRVAEEIDRE >Mature_455_residues MQNINREHPEYIARKAMWKQYKDLYAGGERLRMSASEYLVRRHKEPGEVYQERLSRVFYENYVGSIVDWYAATLMRREPM LQFEGNDAGAKTFYSVFSEDCDLKGTNLHEFFRQRFTQTMVCGSSYVVVDFPRATGPALNRAEEDASGRSRAYLTDYSAD EVINWNYDPSSGLDWVVIRTSCLKQSKVTDAKWEKETRWIYYDRENYQVYRKAGEGQEIELIDEGRHGLAGLHRVPVFEM KVSEGLWLVNKAALLQLEHFNKSNALSWALTMGLFATPVIYSEREWNQIVGESYYIQLAPGDRFGWTEPEGKVYQIAADN LVRLKDEIYRVCYLMNQAGSGTGDQRMSGLSKERDFSVTQEVLRAYGDAVKDTMKQVLKAVAEARQDGVSIDVLGMDEFD IGDFSNELDDARKLLDLGIASDTLKKQIFKRLAFKYLCDARQEIKNRVAEEIDRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52515; Mature: 52515
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNINREHPEYIARKAMWKQYKDLYAGGERLRMSASEYLVRRHKEPGEVYQERLSRVFYE CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NYVGSIVDWYAATLMRREPMLQFEGNDAGAKTFYSVFSEDCDLKGTNLHEFFRQRFTQTM HHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VCGSSYVVVDFPRATGPALNRAEEDASGRSRAYLTDYSADEVINWNYDPSSGLDWVVIRT HCCCCEEEEECCCCCCCHHHCHHHCCCCCCCEEEECCCCCCEEECCCCCCCCCCEEEEEH SCLKQSKVTDAKWEKETRWIYYDRENYQVYRKAGEGQEIELIDEGRHGLAGLHRVPVFEM HHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCEEEEEECCCCCCCHHHCCCEEEE KVSEGLWLVNKAALLQLEHFNKSNALSWALTMGLFATPVIYSEREWNQIVGESYYIQLAP ECCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCHHHHHHCCCCEEEEECC GDRFGWTEPEGKVYQIAADNLVRLKDEIYRVCYLMNQAGSGTGDQRMSGLSKERDFSVTQ CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHH EVLRAYGDAVKDTMKQVLKAVAEARQDGVSIDVLGMDEFDIGDFSNELDDARKLLDLGIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC SDTLKKQIFKRLAFKYLCDARQEIKNRVAEEIDRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQNINREHPEYIARKAMWKQYKDLYAGGERLRMSASEYLVRRHKEPGEVYQERLSRVFYE CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NYVGSIVDWYAATLMRREPMLQFEGNDAGAKTFYSVFSEDCDLKGTNLHEFFRQRFTQTM HHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VCGSSYVVVDFPRATGPALNRAEEDASGRSRAYLTDYSADEVINWNYDPSSGLDWVVIRT HCCCCEEEEECCCCCCCHHHCHHHCCCCCCCEEEECCCCCCEEECCCCCCCCCCEEEEEH SCLKQSKVTDAKWEKETRWIYYDRENYQVYRKAGEGQEIELIDEGRHGLAGLHRVPVFEM HHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCEEEEEECCCCCCCHHHCCCEEEE KVSEGLWLVNKAALLQLEHFNKSNALSWALTMGLFATPVIYSEREWNQIVGESYYIQLAP ECCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCHHHHHHCCCCEEEEECC GDRFGWTEPEGKVYQIAADNLVRLKDEIYRVCYLMNQAGSGTGDQRMSGLSKERDFSVTQ CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHH EVLRAYGDAVKDTMKQVLKAVAEARQDGVSIDVLGMDEFDIGDFSNELDDARKLLDLGIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC SDTLKKQIFKRLAFKYLCDARQEIKNRVAEEIDRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA