| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623201
Identifier: 116623201
GI number: 116623201
Start: 5219524
End: 5220834
Strand: Direct
Name: 116623201
Synonym: Acid_4108
Alternate gene names: NA
Gene position: 5219524-5220834 (Clockwise)
Preceding gene: 116623200
Following gene: 116623202
Centisome position: 52.38
GC content: 58.5
Gene sequence:
>1311_bases ATGGGTCCAACCGGAACCGGACGAACCGAACACCGTCGAATAGAATACGACCCGCTGCCTTCGCAGAAGGCGTTCCACGA GCTGGATGCGCGGTTCAAGGGATTCTCCGGCCCGATTGGAAGCGGCAAAAGCCAGGCGTTGTGCCAAGAGGCGATCCGGC TCAGTTACATGAACCAGGGGCGGCTGGGTTTGTTGGGCGCGCCGACTTACCCGATGTTACGGGATGCGACGCAGGCAGCG CTGCTGGAGATTCTACAGAAGAACGAAATTCCTTACGAGCATAACAAGGCCGAGAATCTTCTGGTTTTTAAGGACACCGG TTCGCGGATTCTGTTTCGTCCGGTGGACGAGTTCGAACGCTTGCGCGGGACGAACCTGGCATGGTTCGGACTGGACGAAC TGACTTACACGCAGCAGGAGGCGTGGCTGCGGCTGGAAGGGCGCCTGCGTGATCCGAAGGCGACGCAGTTATGCGGTTTC GCGGTATGGACCCCGAAGGGATTCGATTGGGTCTACCGCAAATTCATCACGGATCCGGTGCCCGGGTATGGCGCGATCCA GGCGAGACCTTTTGAGAACCGGCACCTGCTGGCGAAGGTCGGAGATTTTTACGACCGGTTAAAAGATAGTTACGACGAGA GATTTTACCAGCAGGAGGTGCTCGGGAACTACCTGAGCATGCAGGGCGGGCGCGTGTATGGAGCGTTCGACCGGACGACG CACATCCAAAGCGTGAGACCGAATCCGTACCTGCCGCTGTTGTGGGCCCTGGATTTCAACGTTGACCCGATGAGTTCGGT GATCGTGCAGGTTGTGAAGGGCGAGGTCAGAGTGCTGGACGAGATCGTGATCCGGCGGGCGACTACGGGGCAGGCGTGCG AGGAGTTTCTCAAGAGGTATCCGACTCATCCGAAGGGCGTGTTGATTTACGGAGATGCATCAGGCAGCGCACAGCAGACC ACGGGCGCCACGGATTACCAAATGGTGCGCGAATACTTTGCGGTGAACTCGAACGTGCCGGTGCAGTACAAGGTGCCGAA GTCGAACCCTGGGGTGCGGGACCGGGTCAACCTGATGAACCGGCAATTGAGATCGGCGTCGGACACGGTCGGGGTGCTGG TGGACCCCAAGTGCAAGGAACTGATCTTGGATTTCGAACAGGTGAGTTACAAGCAGGAGACTAACATCATCGATAAGGAT CGGGACCGGTTGAGGACGCACTTATCGGACGCATTGGGCTATCTGGTGTGGCAGGAGTGCAAGACGGACCAGAAGGTGAT CGAGGGAACGCAGCGGCTGCCGGGGACGTAA
Upstream 100 bases:
>100_bases ATGCCACCGACTTTAAAGCGTCCCTGGGAGATTACCTCAAGTTAGTGCAGATCGAGAAGGAGGTTGGCGGAGAAGACGAG CCGAAGGAGATCAAGGTCAC
Downstream 100 bases:
>100_bases GTTTAGGGCTGGCTGAAGGCCAGCAAGGATTGCCTGCCCCACAGTGCGGCGGGGGCCGCAAACTGTCGCGAGTGGCGGTG ATGCGGCGGAGAGTGGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MGPTGTGRTEHRRIEYDPLPSQKAFHELDARFKGFSGPIGSGKSQALCQEAIRLSYMNQGRLGLLGAPTYPMLRDATQAA LLEILQKNEIPYEHNKAENLLVFKDTGSRILFRPVDEFERLRGTNLAWFGLDELTYTQQEAWLRLEGRLRDPKATQLCGF AVWTPKGFDWVYRKFITDPVPGYGAIQARPFENRHLLAKVGDFYDRLKDSYDERFYQQEVLGNYLSMQGGRVYGAFDRTT HIQSVRPNPYLPLLWALDFNVDPMSSVIVQVVKGEVRVLDEIVIRRATTGQACEEFLKRYPTHPKGVLIYGDASGSAQQT TGATDYQMVREYFAVNSNVPVQYKVPKSNPGVRDRVNLMNRQLRSASDTVGVLVDPKCKELILDFEQVSYKQETNIIDKD RDRLRTHLSDALGYLVWQECKTDQKVIEGTQRLPGT
Sequences:
>Translated_436_residues MGPTGTGRTEHRRIEYDPLPSQKAFHELDARFKGFSGPIGSGKSQALCQEAIRLSYMNQGRLGLLGAPTYPMLRDATQAA LLEILQKNEIPYEHNKAENLLVFKDTGSRILFRPVDEFERLRGTNLAWFGLDELTYTQQEAWLRLEGRLRDPKATQLCGF AVWTPKGFDWVYRKFITDPVPGYGAIQARPFENRHLLAKVGDFYDRLKDSYDERFYQQEVLGNYLSMQGGRVYGAFDRTT HIQSVRPNPYLPLLWALDFNVDPMSSVIVQVVKGEVRVLDEIVIRRATTGQACEEFLKRYPTHPKGVLIYGDASGSAQQT TGATDYQMVREYFAVNSNVPVQYKVPKSNPGVRDRVNLMNRQLRSASDTVGVLVDPKCKELILDFEQVSYKQETNIIDKD RDRLRTHLSDALGYLVWQECKTDQKVIEGTQRLPGT >Mature_435_residues GPTGTGRTEHRRIEYDPLPSQKAFHELDARFKGFSGPIGSGKSQALCQEAIRLSYMNQGRLGLLGAPTYPMLRDATQAAL LEILQKNEIPYEHNKAENLLVFKDTGSRILFRPVDEFERLRGTNLAWFGLDELTYTQQEAWLRLEGRLRDPKATQLCGFA VWTPKGFDWVYRKFITDPVPGYGAIQARPFENRHLLAKVGDFYDRLKDSYDERFYQQEVLGNYLSMQGGRVYGAFDRTTH IQSVRPNPYLPLLWALDFNVDPMSSVIVQVVKGEVRVLDEIVIRRATTGQACEEFLKRYPTHPKGVLIYGDASGSAQQTT GATDYQMVREYFAVNSNVPVQYKVPKSNPGVRDRVNLMNRQLRSASDTVGVLVDPKCKELILDFEQVSYKQETNIIDKDR DRLRTHLSDALGYLVWQECKTDQKVIEGTQRLPGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49729; Mature: 49598
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPTGTGRTEHRRIEYDPLPSQKAFHELDARFKGFSGPIGSGKSQALCQEAIRLSYMNQG CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC RLGLLGAPTYPMLRDATQAALLEILQKNEIPYEHNKAENLLVFKDTGSRILFRPVDEFER CEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCHHHHHH LRGTNLAWFGLDELTYTQQEAWLRLEGRLRDPKATQLCGFAVWTPKGFDWVYRKFITDPV HCCCCEEEEECHHHHHHHHHHHEEEECCCCCCCHHHHCEEEEECCCCHHHHHHHHHCCCC PGYGAIQARPFENRHLLAKVGDFYDRLKDSYDERFYQQEVLGNYLSMQGGRVYGAFDRTT CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC HIQSVRPNPYLPLLWALDFNVDPMSSVIVQVVKGEVRVLDEIVIRRATTGQACEEFLKRY HHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC PTHPKGVLIYGDASGSAQQTTGATDYQMVREYFAVNSNVPVQYKVPKSNPGVRDRVNLMN CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHH RQLRSASDTVGVLVDPKCKELILDFEQVSYKQETNIIDKDRDRLRTHLSDALGYLVWQEC HHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KTDQKVIEGTQRLPGT CCHHHHHHHHHCCCCC >Mature Secondary Structure GPTGTGRTEHRRIEYDPLPSQKAFHELDARFKGFSGPIGSGKSQALCQEAIRLSYMNQG CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC RLGLLGAPTYPMLRDATQAALLEILQKNEIPYEHNKAENLLVFKDTGSRILFRPVDEFER CEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCHHHHHH LRGTNLAWFGLDELTYTQQEAWLRLEGRLRDPKATQLCGFAVWTPKGFDWVYRKFITDPV HCCCCEEEEECHHHHHHHHHHHEEEECCCCCCCHHHHCEEEEECCCCHHHHHHHHHCCCC PGYGAIQARPFENRHLLAKVGDFYDRLKDSYDERFYQQEVLGNYLSMQGGRVYGAFDRTT CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC HIQSVRPNPYLPLLWALDFNVDPMSSVIVQVVKGEVRVLDEIVIRRATTGQACEEFLKRY HHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC PTHPKGVLIYGDASGSAQQTTGATDYQMVREYFAVNSNVPVQYKVPKSNPGVRDRVNLMN CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHH RQLRSASDTVGVLVDPKCKELILDFEQVSYKQETNIIDKDRDRLRTHLSDALGYLVWQEC HHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KTDQKVIEGTQRLPGT CCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA