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The map label for this gene is hdeD [C]

Identifier: 116623175

GI number: 116623175

Start: 5188803

End: 5189387

Strand: Reverse

Name: hdeD [C]

Synonym: Acid_4082

Alternate gene names: 116623175

Gene position: 5189387-5188803 (Counterclockwise)

Preceding gene: 116623176

Following gene: 116623174

Centisome position: 52.07

GC content: 58.12

Gene sequence:

>585_bases
ATGCCTGAACTACCGGAAGCAGCGTCGAAGCGAGTGATCACTTGGTCGATCATCTGGTCGATCCTGTTGATGGTTGTCGG
ATGCGCGGCGATTGCGTCACCGATCGTCAGCTCCATCGGAGCTGCATTCATCATCGGATGGCTGGTCTTTATCGGCGGAC
TGGTGCAATTCATTCACGCCGTTCAGTCCAAAGGCATCGGCCACCTTGCGTGGAAACTGCTGGTTGCAGCGTTCTATGTT
ATGGCCGGAGTCTACCTGGTGGCTCACCCGCTTCTGGAACTGGCCGGTCTGACTCTCGTGCTGGCCATAATCTTCTGCGC
GACCGGCACCGCGGATATCGTCGCCTGGTTTTCGAATCGAAAAATCGGCGGCTCCGTCTGGATGCTCGTGAACGGCGTCG
TCGCCTTGTTTCTGGGTTTTACGATCTGGAATCGATGGCCGGCCAGTTCACTGTGGTTCCTCGGAACCCTGGTGGGTATC
AGCCTGTTCATGGCTGGAATGGCCCGTTTGATGATGGCCCTGGCGGTTCGCAGGCTGCTTCACAACCCCGGAAGCAGCCC
AATTCACGAGCGCCGGGCCGCATAG

Upstream 100 bases:

>100_bases
GCTTCAGGAAGCGGCGTCCTACAACCTGAGTCAGGTGATCGAAGAGGTCAAGAAGGCCCAATCGGTCAGCCACGCAGGCC
AGTAGAGCTTGAGGAAACAA

Downstream 100 bases:

>100_bases
AATCGAGCGCGCCGGATGGGAGCCGGCAGATGATGTTGAAACGTTCCACGCAACTCCTGGCGGTAGGTCTGAGCCTTTTG
ATCTCGGTCCCATCGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MPELPEAASKRVITWSIIWSILLMVVGCAAIASPIVSSIGAAFIIGWLVFIGGLVQFIHAVQSKGIGHLAWKLLVAAFYV
MAGVYLVAHPLLELAGLTLVLAIIFCATGTADIVAWFSNRKIGGSVWMLVNGVVALFLGFTIWNRWPASSLWFLGTLVGI
SLFMAGMARLMMALAVRRLLHNPGSSPIHERRAA

Sequences:

>Translated_194_residues
MPELPEAASKRVITWSIIWSILLMVVGCAAIASPIVSSIGAAFIIGWLVFIGGLVQFIHAVQSKGIGHLAWKLLVAAFYV
MAGVYLVAHPLLELAGLTLVLAIIFCATGTADIVAWFSNRKIGGSVWMLVNGVVALFLGFTIWNRWPASSLWFLGTLVGI
SLFMAGMARLMMALAVRRLLHNPGSSPIHERRAA
>Mature_193_residues
PELPEAASKRVITWSIIWSILLMVVGCAAIASPIVSSIGAAFIIGWLVFIGGLVQFIHAVQSKGIGHLAWKLLVAAFYVM
AGVYLVAHPLLELAGLTLVLAIIFCATGTADIVAWFSNRKIGGSVWMLVNGVVALFLGFTIWNRWPASSLWFLGTLVGIS
LFMAGMARLMMALAVRRLLHNPGSSPIHERRAA

Specific function: Unknown

COG id: COG3247

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20897; Mature: 20765

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELPEAASKRVITWSIIWSILLMVVGCAAIASPIVSSIGAAFIIGWLVFIGGLVQFIHA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSKGIGHLAWKLLVAAFYVMAGVYLVAHPLLELAGLTLVLAIIFCATGTADIVAWFSNR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
KIGGSVWMLVNGVVALFLGFTIWNRWPASSLWFLGTLVGISLFMAGMARLMMALAVRRLL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNPGSSPIHERRAA
CCCCCCCHHHHCCC
>Mature Secondary Structure 
PELPEAASKRVITWSIIWSILLMVVGCAAIASPIVSSIGAAFIIGWLVFIGGLVQFIHA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSKGIGHLAWKLLVAAFYVMAGVYLVAHPLLELAGLTLVLAIIFCATGTADIVAWFSNR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
KIGGSVWMLVNGVVALFLGFTIWNRWPASSLWFLGTLVGISLFMAGMARLMMALAVRRLL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNPGSSPIHERRAA
CCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA