| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623166
Identifier: 116623166
GI number: 116623166
Start: 5168184
End: 5169020
Strand: Reverse
Name: 116623166
Synonym: Acid_4072
Alternate gene names: NA
Gene position: 5169020-5168184 (Counterclockwise)
Preceding gene: 116623167
Following gene: 116623160
Centisome position: 51.87
GC content: 59.14
Gene sequence:
>837_bases ATGGGGACGGCACACAATCTGGATCAATGGGATGAGTTCGTAGAAGAGCGCTACGACCAGAATCGCAAGACCGAGGATTT CCGAAAGTACGACGATTCCGCGCCCGCGGGCGTCCGCGAATTTTACCGCGAGAATCACGCCAAACAGACACGCGAATTCG CACAGGCGATGAAGCGCAAGTACGGCGCAAAGACGCGGGGCCGGATGAGCATCTGGGAGGCCTGCGAATTTCTGAACACG CTGGTGGATGAGAGCGACCCCGATACGGATCTTTCGCAGATCCAACATTTGATGCAGACCTCCGAGGCGATTCGCCGCGA CGGGCATCCGCGCTGGATGATCCTGACCGGCTTTCTGCACGATCTCGGCAAGGCATTGTGCCTCTATGGCGAGCCGCAGT GGGCCGTGGTCGGCGACACGTTCCCGGTAGGGTGCGCGTGGTCAGACAAGATCATCTTTCCGGAATTCTTCGCCGCCAAT CCCGATTCCGCCGTGTCCGAGTACCAGACGCGGCTGGGCGTATACCAGGAAGGCTGCGGCCTCGATAACGTGGATCTCTC GTGGGGTCACGACGAGTATCTGTACCAGGTGGTCAAGGACTACCTGCCGGAAGAGGGGCAGTACATGATCCGCTACCACT CTTTCTATCCGTGGCATCGCGAGGGGGCGTACGGCTACCTGATGAACGATAGAGACCGCCGCATGCTGCCGTGGGTGCAG AAGTTCAACCCATACGACCTGTACTCCAAGAGCGCGGCTCCGCCGGACGTTGCGGAGCTGAAGCCGTACTACGAAGAGTT GATCTCGGAATTCTTCCCGAGTAAGATCGCCTGGTAG
Upstream 100 bases:
>100_bases ACCCGGACGTGAATGCCGTGGCACGGCCGGTGCAGATGGAGATTCGGAAGAAGTAGGGGCGGGTTGCGGCGCCCGTGGTA AGTCGTCAATACTGAAGGAC
Downstream 100 bases:
>100_bases GAAGAGGACGCTCCCTGAGACTGAAGTAGCGGTCGGTAATTGGGCTGTTCAAACGGCCAATTAAACGCAGCGACTTAAGT AATTGCGCATAAGTGCCGTG
Product: inositol oxygenase
Products: NA
Alternate protein names: Inositol Oxygenase HrmE
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MGTAHNLDQWDEFVEERYDQNRKTEDFRKYDDSAPAGVREFYRENHAKQTREFAQAMKRKYGAKTRGRMSIWEACEFLNT LVDESDPDTDLSQIQHLMQTSEAIRRDGHPRWMILTGFLHDLGKALCLYGEPQWAVVGDTFPVGCAWSDKIIFPEFFAAN PDSAVSEYQTRLGVYQEGCGLDNVDLSWGHDEYLYQVVKDYLPEEGQYMIRYHSFYPWHREGAYGYLMNDRDRRMLPWVQ KFNPYDLYSKSAAPPDVAELKPYYEELISEFFPSKIAW
Sequences:
>Translated_278_residues MGTAHNLDQWDEFVEERYDQNRKTEDFRKYDDSAPAGVREFYRENHAKQTREFAQAMKRKYGAKTRGRMSIWEACEFLNT LVDESDPDTDLSQIQHLMQTSEAIRRDGHPRWMILTGFLHDLGKALCLYGEPQWAVVGDTFPVGCAWSDKIIFPEFFAAN PDSAVSEYQTRLGVYQEGCGLDNVDLSWGHDEYLYQVVKDYLPEEGQYMIRYHSFYPWHREGAYGYLMNDRDRRMLPWVQ KFNPYDLYSKSAAPPDVAELKPYYEELISEFFPSKIAW >Mature_277_residues GTAHNLDQWDEFVEERYDQNRKTEDFRKYDDSAPAGVREFYRENHAKQTREFAQAMKRKYGAKTRGRMSIWEACEFLNTL VDESDPDTDLSQIQHLMQTSEAIRRDGHPRWMILTGFLHDLGKALCLYGEPQWAVVGDTFPVGCAWSDKIIFPEFFAANP DSAVSEYQTRLGVYQEGCGLDNVDLSWGHDEYLYQVVKDYLPEEGQYMIRYHSFYPWHREGAYGYLMNDRDRRMLPWVQK FNPYDLYSKSAAPPDVAELKPYYEELISEFFPSKIAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI33667030, Length=260, Percent_Identity=48.8461538461538, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI71985517, Length=187, Percent_Identity=42.7807486631016, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI221331108, Length=265, Percent_Identity=44.9056603773585, Blast_Score=228, Evalue=3e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32736; Mature: 32605
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTAHNLDQWDEFVEERYDQNRKTEDFRKYDDSAPAGVREFYRENHAKQTREFAQAMKRK CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YGAKTRGRMSIWEACEFLNTLVDESDPDTDLSQIQHLMQTSEAIRRDGHPRWMILTGFLH HCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH DLGKALCLYGEPQWAVVGDTFPVGCAWSDKIIFPEFFAANPDSAVSEYQTRLGVYQEGCG HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCC LDNVDLSWGHDEYLYQVVKDYLPEEGQYMIRYHSFYPWHREGAYGYLMNDRDRRMLPWVQ CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHH KFNPYDLYSKSAAPPDVAELKPYYEELISEFFPSKIAW HCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GTAHNLDQWDEFVEERYDQNRKTEDFRKYDDSAPAGVREFYRENHAKQTREFAQAMKRK CCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YGAKTRGRMSIWEACEFLNTLVDESDPDTDLSQIQHLMQTSEAIRRDGHPRWMILTGFLH HCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH DLGKALCLYGEPQWAVVGDTFPVGCAWSDKIIFPEFFAANPDSAVSEYQTRLGVYQEGCG HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCC LDNVDLSWGHDEYLYQVVKDYLPEEGQYMIRYHSFYPWHREGAYGYLMNDRDRRMLPWVQ CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHH KFNPYDLYSKSAAPPDVAELKPYYEELISEFFPSKIAW HCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA