| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623112
Identifier: 116623112
GI number: 116623112
Start: 5092332
End: 5093501
Strand: Direct
Name: 116623112
Synonym: Acid_4017
Alternate gene names: NA
Gene position: 5092332-5093501 (Clockwise)
Preceding gene: 116623110
Following gene: 116623113
Centisome position: 51.1
GC content: 63.33
Gene sequence:
>1170_bases GTGACCCTAACCCGGCGATCATTCTGTGTTTCCCTCGGTGCGCTTCCCCTGTTTGCCGCCAGTGACCGTCGCGGAATCCT GCTCACCGCGGAGCAGGCCGAGCGCCTGCGCGCCATCCCGGTGCCGGATGCGGTCCGCCAAAATGCGTCGGCCGCCCTCA ACGCCGGACCGTGGAGCGTCACTACCCATCGCCCCGAGCATGTCAGCGTCGGCCCCAACGAATACTACAGCGAGGGTCCT TACTGGTGGCCTGATCCCAAGAACCCCGACGGTCCATATATCCGTCGGGACGGCGAACGCAACCCGACCCGCTTCATGGG GAATCGCCGGGATCTCGGCGAGATGTGCACCGCGGTGCTCGCGCTCGGCACCAGCGCCTTCCTGCTCGGCGACAAGGCTT GCGGCGCTCACGCAGCCAGGGTGCTCTCCACCTGGTTCGTGGACCCGAAGACGCGCATGAATCCCAACCTGGAATTCGGG CAGGCCGTGCGCGGTGTCAGCACCGGGCGCGGGACCGGGCTCATCGACACCGTCTCCCTCATCCATGCCGCCCAGGGGAT CTGGCTCCTGGAACGCGCCGGCATGCTCGATTCCGGCCTTGCCGGCGGCGTGCGGGCATGGTACTCCGACTTCCTTAAAT GGATGACCACCGACAGCAAGGGGCTGGACGAAAAGAGATCCGGCAACAATCATGCCACCTGGTGGACCGCGCAGGTCGCG TCCTATGCCACCCTCACCGGCAACGAGCCAGCCAAATCCATGGCTTGGGAGCATTACCGCAAGGTTCTCGTGCCGGAGGA GATCAAACCGGAGGGCAGTTGCCCCCGTGAAGAATCGCGCACCAATTCCTTGAGCTACTCGGCAATGAACCTGGATGCCT TCAGCGTAGTCTGCCGCGTGGCGGCCACCAACGGCCAGGACCTATGGAACTTTCGTACTCATCAGGGGGTCGGAGTGGTC AACGCCTTCGACTATCTGACGCCCTATGTGCTCCGCCCGGATACCTGGAAGAAGGAACAGATTACCAGGTTTAACCCCGA CACCACCTTCTTTCCCGGCCTGGCCGGAATCGGTCTCGGCTCGAAACCACTGGCAGAGGCCTACGCGCGCCTTCCCCGCT CCACGTCGCCCTGGAGCCAGTTCCTATGTTTATTGGTTAAGATTGGTTAA
Upstream 100 bases:
>100_bases CGGCCGGCGTTTAACGCCTTCCCCACGCAGGTATTGAACTCTCCGGGCGCACAACGCATCCTGACTTTGCAGTCGGCGCG CTCGGCGCTAAACTACGCTT
Downstream 100 bases:
>100_bases CTTGTCCTCCGGCCCCTCGTTGTCCCGCCCTGAGAGTAAAATCCAGGCTGACCTGTTGCAAATTCCCGCCATTTGACGAA GCTTCTCCCCAAAAAGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTLTRRSFCVSLGALPLFAASDRRGILLTAEQAERLRAIPVPDAVRQNASAALNAGPWSVTTHRPEHVSVGPNEYYSEGP YWWPDPKNPDGPYIRRDGERNPTRFMGNRRDLGEMCTAVLALGTSAFLLGDKACGAHAARVLSTWFVDPKTRMNPNLEFG QAVRGVSTGRGTGLIDTVSLIHAAQGIWLLERAGMLDSGLAGGVRAWYSDFLKWMTTDSKGLDEKRSGNNHATWWTAQVA SYATLTGNEPAKSMAWEHYRKVLVPEEIKPEGSCPREESRTNSLSYSAMNLDAFSVVCRVAATNGQDLWNFRTHQGVGVV NAFDYLTPYVLRPDTWKKEQITRFNPDTTFFPGLAGIGLGSKPLAEAYARLPRSTSPWSQFLCLLVKIG
Sequences:
>Translated_389_residues MTLTRRSFCVSLGALPLFAASDRRGILLTAEQAERLRAIPVPDAVRQNASAALNAGPWSVTTHRPEHVSVGPNEYYSEGP YWWPDPKNPDGPYIRRDGERNPTRFMGNRRDLGEMCTAVLALGTSAFLLGDKACGAHAARVLSTWFVDPKTRMNPNLEFG QAVRGVSTGRGTGLIDTVSLIHAAQGIWLLERAGMLDSGLAGGVRAWYSDFLKWMTTDSKGLDEKRSGNNHATWWTAQVA SYATLTGNEPAKSMAWEHYRKVLVPEEIKPEGSCPREESRTNSLSYSAMNLDAFSVVCRVAATNGQDLWNFRTHQGVGVV NAFDYLTPYVLRPDTWKKEQITRFNPDTTFFPGLAGIGLGSKPLAEAYARLPRSTSPWSQFLCLLVKIG >Mature_388_residues TLTRRSFCVSLGALPLFAASDRRGILLTAEQAERLRAIPVPDAVRQNASAALNAGPWSVTTHRPEHVSVGPNEYYSEGPY WWPDPKNPDGPYIRRDGERNPTRFMGNRRDLGEMCTAVLALGTSAFLLGDKACGAHAARVLSTWFVDPKTRMNPNLEFGQ AVRGVSTGRGTGLIDTVSLIHAAQGIWLLERAGMLDSGLAGGVRAWYSDFLKWMTTDSKGLDEKRSGNNHATWWTAQVAS YATLTGNEPAKSMAWEHYRKVLVPEEIKPEGSCPREESRTNSLSYSAMNLDAFSVVCRVAATNGQDLWNFRTHQGVGVVN AFDYLTPYVLRPDTWKKEQITRFNPDTTFFPGLAGIGLGSKPLAEAYARLPRSTSPWSQFLCLLVKIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42912; Mature: 42781
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTRRSFCVSLGALPLFAASDRRGILLTAEQAERLRAIPVPDAVRQNASAALNAGPWSV CCCCHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHCCCCCCHHHHCCCCCEECCCCCCE TTHRPEHVSVGPNEYYSEGPYWWPDPKNPDGPYIRRDGERNPTRFMGNRRDLGEMCTAVL ECCCCCEEECCCHHHHCCCCEECCCCCCCCCCCEECCCCCCHHHHCCCCCCHHHHHHHHH ALGTSAFLLGDKACGAHAARVLSTWFVDPKTRMNPNLEFGQAVRGVSTGRGTGLIDTVSL HHCCHHEEECCCHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHH IHAAQGIWLLERAGMLDSGLAGGVRAWYSDFLKWMTTDSKGLDEKRSGNNHATWWTAQVA HHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEHHH SYATLTGNEPAKSMAWEHYRKVLVPEEIKPEGSCPREESRTNSLSYSAMNLDAFSVVCRV HEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECHHHHHHHHHH AATNGQDLWNFRTHQGVGVVNAFDYLTPYVLRPDTWKKEQITRFNPDTTFFPGLAGIGLG HCCCCCHHHCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCEEECCCCCCCCCHHCCCCC SKPLAEAYARLPRSTSPWSQFLCLLVKIG CHHHHHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TLTRRSFCVSLGALPLFAASDRRGILLTAEQAERLRAIPVPDAVRQNASAALNAGPWSV CCCHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHCCCCCCHHHHCCCCCEECCCCCCE TTHRPEHVSVGPNEYYSEGPYWWPDPKNPDGPYIRRDGERNPTRFMGNRRDLGEMCTAVL ECCCCCEEECCCHHHHCCCCEECCCCCCCCCCCEECCCCCCHHHHCCCCCCHHHHHHHHH ALGTSAFLLGDKACGAHAARVLSTWFVDPKTRMNPNLEFGQAVRGVSTGRGTGLIDTVSL HHCCHHEEECCCHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHH IHAAQGIWLLERAGMLDSGLAGGVRAWYSDFLKWMTTDSKGLDEKRSGNNHATWWTAQVA HHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEHHH SYATLTGNEPAKSMAWEHYRKVLVPEEIKPEGSCPREESRTNSLSYSAMNLDAFSVVCRV HEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECHHHHHHHHHH AATNGQDLWNFRTHQGVGVVNAFDYLTPYVLRPDTWKKEQITRFNPDTTFFPGLAGIGLG HCCCCCHHHCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCEEECCCCCCCCCHHCCCCC SKPLAEAYARLPRSTSPWSQFLCLLVKIG CHHHHHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA