| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yfmG [H]
Identifier: 116623080
GI number: 116623080
Start: 5051028
End: 5053112
Strand: Reverse
Name: yfmG [H]
Synonym: Acid_3984
Alternate gene names: 116623080
Gene position: 5053112-5051028 (Counterclockwise)
Preceding gene: 116623081
Following gene: 116623079
Centisome position: 50.71
GC content: 64.17
Gene sequence:
>2085_bases ATGCGCATGCGATGGCGATGGATTCTGGCGGCTGCGGCGGTTGTGCTGTGGGCGCAGGACAGCAAGTATCCTCCGCAGGG GCAACAGTTCCCGGGGCCACCCTCCAAGGGCGAAGCGGCAGACTGGCTGCGCGAGATCAAACAGTATCGGGAAGAGAAGC GCATTCGCGCGGGGCTGAACGGTGAGCTTTACGAACGGCCGGAATTGCTTTGGGCGCAGAGCAGTTTCATGCAGCCGCAA TCCATGGTGGAGGACCGGTTCTTCTACGACCCCGTTGCGCGGCGCTACACGGTGGAGCGCTTCCTTGCGGACCTCGACAA ACGCTACGGCGGAATCGACAGCGTCCTGCTGTGGCCGGTCTATCCGAATATCGGCATCGACAATCGCAATCAATTCGACC TGCTGCGCGACATGCCGGGCGGCACTGCCGGACTCCGCGAGATGGTGGCGGAGTTTCACAAGCGTGGCGTGCGCGTGCTG TTCCCCAATATGCCGTGGGACATGGGTTCGCGGGTAGAGCTGCGCAGTGTGCCGGAAACGCTCGCGGCGCTGATGAAAGA GATCGGCGCGGACGGCGTGAATGGCGACACCTATGGCGGCGTGCCGCGCAGTTTTCGAACGGCCTCCGACGCCACCGGGC ACCCGCTGGTCTTCGAACCCGAGGGGTACCCGGAGAGCGACGAGATGCTGAACTGGAACAGCATGTCCTGGGGTTACTGG AAATATCCCTTCGCCCCGATGGTAAGCCGCGGGAAATGGCTGGAGCCGCGCCACATGGTGAACGTCTGCGACCGCTGGAA TAAGGATAAGACCGACAATCTGCAGGCGGCGTTCTTCAACGGCGTGGGGTACGAAACCTGGGAGAACATCTGGGGAATCT GGAACGGCATCACGGCGCGCGACGCGGAGGCGATCCGCCGGGTCGGGAAGATCGAGCGGCGCTTCGCGAAATACCTGGTA AGCCCGGACTGGGAGCCGCACACTCCGACAGTGCCGTACGGGGTGTTCGCGAGTAAGTTCCCGCTCGCCGGCCGGACCTT GTGGACGCTGGTCAATCGCGCCGTGTACAACATCGAGGGCGTCCAATTGCGAGTGCCGGCGCAGGCGGGGATGCGCTACT TCGACTTGTGGCACGGGGCGGAACTTACTCCGGTCAACGGTGAACTGCGGTTTGCGATGGAAGCATCGGGTTACGGCGCG GTGCTCGCGCAGCCGGAGCCAGCGGATTCAGGTCTGCGCGGTTTCCTGGACGAGATGCGCGCGCTGAATGCGCGGCCGCT TTCGTCCTTCCCCAAGGTATGGCAGGTGCTGCCGCAGCAGATCGTCGCGATTGAGCGGACCGCTCCGGCCGCGCAGGCGC CGGCAGGGATGGTCGCGATCCCGGCGGCTGCGCAGTATCACTTTAATGTGCACGGCATCGAGATCGAAGGCGGCGACGAT ATCGGAGTGGACGTGCAGTATCCCGGCGAGGACTCTCCGCGGCGGCACCATGCGCAGACGCTGGCGATTCCGGCGTTCTA TATGGATAAGTACAACGTCACGAATCGGGAGTTCGCGGCGTTCGTGAAGGCGGCGAACTACCGTCCCGCGGACGATCACA ATTTCCTGAAGGATTGGAAGGACGACGACCGTCCGGTGACGTGGGTGTCGCTGGAAGATGCGCGCGCGTATGCGGCGTGG GCGGGCAAGCGGCTGCCGCACGAGTGGGAATGGCAGTATGCCGCGCAGGGCTTGGACGGCCGGCAATACCCGTGGGGCAA TGCGTGGTGCGAGGAGTGCGCTGCCAAACAGGAGCACGGGCGCGAGCTGCGCGGCCCTGAGCCCGGCGACGCGCATCCCA AAGGCGCGAGCCCGTTCGGCGTGATGGACCTGACCGGCAACATCTGGCAGTGGACCGACGAATTCCAGGATCTGCACACC CGCTCGGCCACGCTGCGCGGCGGCGGCTACTATCGTCCCTCGGGATCGCGCTGGTATTTCCCCTCGGCATACAAACTGGA TGAGCACGGCAAATATCTGCTGATGGCGCCCTCGAAAGACAGGGCGGGCACGCTGGGCTTCCGCTGCGTCAAAGATGCGC AATAA
Upstream 100 bases:
>100_bases TTTGCGGTTCTCTGCGGCTCTGCGTCTTTGCGAGAAATCTTCAATCTCTCGCAAAGCCGCCAAGCCGCCAAGTAACGCCA AGAAGACCATTGGATAGAAT
Downstream 100 bases:
>100_bases AGTGCGATATCGTGAAGGGCACTATGAAGTACACCATCTTTTTGCTTGCGTTCGGAGTCGCCCATGCCGCGAGTTCGCTG CTGGTGCTGTCGAAGAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 694; Mature: 694
Protein sequence:
>694_residues MRMRWRWILAAAAVVLWAQDSKYPPQGQQFPGPPSKGEAADWLREIKQYREEKRIRAGLNGELYERPELLWAQSSFMQPQ SMVEDRFFYDPVARRYTVERFLADLDKRYGGIDSVLLWPVYPNIGIDNRNQFDLLRDMPGGTAGLREMVAEFHKRGVRVL FPNMPWDMGSRVELRSVPETLAALMKEIGADGVNGDTYGGVPRSFRTASDATGHPLVFEPEGYPESDEMLNWNSMSWGYW KYPFAPMVSRGKWLEPRHMVNVCDRWNKDKTDNLQAAFFNGVGYETWENIWGIWNGITARDAEAIRRVGKIERRFAKYLV SPDWEPHTPTVPYGVFASKFPLAGRTLWTLVNRAVYNIEGVQLRVPAQAGMRYFDLWHGAELTPVNGELRFAMEASGYGA VLAQPEPADSGLRGFLDEMRALNARPLSSFPKVWQVLPQQIVAIERTAPAAQAPAGMVAIPAAAQYHFNVHGIEIEGGDD IGVDVQYPGEDSPRRHHAQTLAIPAFYMDKYNVTNREFAAFVKAANYRPADDHNFLKDWKDDDRPVTWVSLEDARAYAAW AGKRLPHEWEWQYAAQGLDGRQYPWGNAWCEECAAKQEHGRELRGPEPGDAHPKGASPFGVMDLTGNIWQWTDEFQDLHT RSATLRGGGYYRPSGSRWYFPSAYKLDEHGKYLLMAPSKDRAGTLGFRCVKDAQ
Sequences:
>Translated_694_residues MRMRWRWILAAAAVVLWAQDSKYPPQGQQFPGPPSKGEAADWLREIKQYREEKRIRAGLNGELYERPELLWAQSSFMQPQ SMVEDRFFYDPVARRYTVERFLADLDKRYGGIDSVLLWPVYPNIGIDNRNQFDLLRDMPGGTAGLREMVAEFHKRGVRVL FPNMPWDMGSRVELRSVPETLAALMKEIGADGVNGDTYGGVPRSFRTASDATGHPLVFEPEGYPESDEMLNWNSMSWGYW KYPFAPMVSRGKWLEPRHMVNVCDRWNKDKTDNLQAAFFNGVGYETWENIWGIWNGITARDAEAIRRVGKIERRFAKYLV SPDWEPHTPTVPYGVFASKFPLAGRTLWTLVNRAVYNIEGVQLRVPAQAGMRYFDLWHGAELTPVNGELRFAMEASGYGA VLAQPEPADSGLRGFLDEMRALNARPLSSFPKVWQVLPQQIVAIERTAPAAQAPAGMVAIPAAAQYHFNVHGIEIEGGDD IGVDVQYPGEDSPRRHHAQTLAIPAFYMDKYNVTNREFAAFVKAANYRPADDHNFLKDWKDDDRPVTWVSLEDARAYAAW AGKRLPHEWEWQYAAQGLDGRQYPWGNAWCEECAAKQEHGRELRGPEPGDAHPKGASPFGVMDLTGNIWQWTDEFQDLHT RSATLRGGGYYRPSGSRWYFPSAYKLDEHGKYLLMAPSKDRAGTLGFRCVKDAQ >Mature_694_residues MRMRWRWILAAAAVVLWAQDSKYPPQGQQFPGPPSKGEAADWLREIKQYREEKRIRAGLNGELYERPELLWAQSSFMQPQ SMVEDRFFYDPVARRYTVERFLADLDKRYGGIDSVLLWPVYPNIGIDNRNQFDLLRDMPGGTAGLREMVAEFHKRGVRVL FPNMPWDMGSRVELRSVPETLAALMKEIGADGVNGDTYGGVPRSFRTASDATGHPLVFEPEGYPESDEMLNWNSMSWGYW KYPFAPMVSRGKWLEPRHMVNVCDRWNKDKTDNLQAAFFNGVGYETWENIWGIWNGITARDAEAIRRVGKIERRFAKYLV SPDWEPHTPTVPYGVFASKFPLAGRTLWTLVNRAVYNIEGVQLRVPAQAGMRYFDLWHGAELTPVNGELRFAMEASGYGA VLAQPEPADSGLRGFLDEMRALNARPLSSFPKVWQVLPQQIVAIERTAPAAQAPAGMVAIPAAAQYHFNVHGIEIEGGDD IGVDVQYPGEDSPRRHHAQTLAIPAFYMDKYNVTNREFAAFVKAANYRPADDHNFLKDWKDDDRPVTWVSLEDARAYAAW AGKRLPHEWEWQYAAQGLDGRQYPWGNAWCEECAAKQEHGRELRGPEPGDAHPKGASPFGVMDLTGNIWQWTDEFQDLHT RSATLRGGGYYRPSGSRWYFPSAYKLDEHGKYLLMAPSKDRAGTLGFRCVKDAQ
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI257470975, Length=273, Percent_Identity=31.8681318681319, Blast_Score=90, Evalue=7e-18, Organism=Homo sapiens, GI194248087, Length=232, Percent_Identity=30.6034482758621, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI38202250, Length=298, Percent_Identity=29.1946308724832, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI257470977, Length=295, Percent_Identity=28.8135593220339, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI194248088, Length=247, Percent_Identity=29.1497975708502, Blast_Score=77, Evalue=7e-14, Organism=Homo sapiens, GI226437577, Length=164, Percent_Identity=35.9756097560976, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI20130397, Length=342, Percent_Identity=26.6081871345029, Blast_Score=76, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323 [H]
EC number: NA
Molecular weight: Translated: 78986; Mature: 78986
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMRWRWILAAAAVVLWAQDSKYPPQGQQFPGPPSKGEAADWLREIKQYREEKRIRAGLN CCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC GELYERPELLWAQSSFMQPQSMVEDRFFYDPVARRYTVERFLADLDKRYGGIDSVLLWPV CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC YPNIGIDNRNQFDLLRDMPGGTAGLREMVAEFHKRGVRVLFPNMPWDMGSRVELRSVPET CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEHHHHHHH LAALMKEIGADGVNGDTYGGVPRSFRTASDATGHPLVFEPEGYPESDEMLNWNSMSWGYW HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCE KYPFAPMVSRGKWLEPRHMVNVCDRWNKDKTDNLQAAFFNGVGYETWENIWGIWNGITAR ECCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCH DAEAIRRVGKIERRFAKYLVSPDWEPHTPTVPYGVFASKFPLAGRTLWTLVNRAVYNIEG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHEECCC VQLRVPAQAGMRYFDLWHGAELTPVNGELRFAMEASGYGAVLAQPEPADSGLRGFLDEMR EEEECCHHHCCEEEEHHCCCEECCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHH ALNARPLSSFPKVWQVLPQQIVAIERTAPAAQAPAGMVAIPAAAQYHFNVHGIEIEGGDD HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEEEEEEEECCCC IGVDVQYPGEDSPRRHHAQTLAIPAFYMDKYNVTNREFAAFVKAANYRPADDHNFLKDWK CCEEEECCCCCCCHHHHHHEEEEEEHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCC DDDRPVTWVSLEDARAYAAWAGKRLPHEWEWQYAAQGLDGRQYPWGNAWCEECAAKQEHG CCCCCEEEEEEHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC RELRGPEPGDAHPKGASPFGVMDLTGNIWQWTDEFQDLHTRSATLRGGGYYRPSGSRWYF CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCEEECCCCEECCCCCEEEC PSAYKLDEHGKYLLMAPSKDRAGTLGFRCVKDAQ CCCCEECCCCCEEEEECCCCCCCCCCEEEECCCC >Mature Secondary Structure MRMRWRWILAAAAVVLWAQDSKYPPQGQQFPGPPSKGEAADWLREIKQYREEKRIRAGLN CCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC GELYERPELLWAQSSFMQPQSMVEDRFFYDPVARRYTVERFLADLDKRYGGIDSVLLWPV CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC YPNIGIDNRNQFDLLRDMPGGTAGLREMVAEFHKRGVRVLFPNMPWDMGSRVELRSVPET CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEHHHHHHH LAALMKEIGADGVNGDTYGGVPRSFRTASDATGHPLVFEPEGYPESDEMLNWNSMSWGYW HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCE KYPFAPMVSRGKWLEPRHMVNVCDRWNKDKTDNLQAAFFNGVGYETWENIWGIWNGITAR ECCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCH DAEAIRRVGKIERRFAKYLVSPDWEPHTPTVPYGVFASKFPLAGRTLWTLVNRAVYNIEG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHEECCC VQLRVPAQAGMRYFDLWHGAELTPVNGELRFAMEASGYGAVLAQPEPADSGLRGFLDEMR EEEECCHHHCCEEEEHHCCCEECCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHH ALNARPLSSFPKVWQVLPQQIVAIERTAPAAQAPAGMVAIPAAAQYHFNVHGIEIEGGDD HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEEEEEEEECCCC IGVDVQYPGEDSPRRHHAQTLAIPAFYMDKYNVTNREFAAFVKAANYRPADDHNFLKDWK CCEEEECCCCCCCHHHHHHEEEEEEHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCC DDDRPVTWVSLEDARAYAAWAGKRLPHEWEWQYAAQGLDGRQYPWGNAWCEECAAKQEHG CCCCCEEEEEEHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC RELRGPEPGDAHPKGASPFGVMDLTGNIWQWTDEFQDLHTRSATLRGGGYYRPSGSRWYF CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCEEECCCCEECCCCCEEEC PSAYKLDEHGKYLLMAPSKDRAGTLGFRCVKDAQ CCCCEECCCCCEEEEECCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]