| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is oar [H]
Identifier: 116623059
GI number: 116623059
Start: 5016836
End: 5019766
Strand: Direct
Name: oar [H]
Synonym: Acid_3963
Alternate gene names: 116623059
Gene position: 5016836-5019766 (Clockwise)
Preceding gene: 116623058
Following gene: 116623060
Centisome position: 50.34
GC content: 60.7
Gene sequence:
>2931_bases ATGCGAAAACATATCTGTGGCCTGGCCGTCGGGCTCTTATTATGTGCGGTAACGGGAACCGCCCAGGAGATTGGCGGGGC CACGATCAATGGGAGCGTGACTGACCCCTCCGGCGCGCTGATCGCCGGCGCCAGGGTCACCGCTACCCAGACGGCCACGG GCGCCCAGCGGACCACACAGACTTCGAGCGCCGGGCTGTACACCCTGTCCGCCCTCCCGGCCGGAGCCTACGATGTCACC ATCGAAGGTACCGGGTTCAAACAAGCCAAGTTCGCCGCGGTCCCGGTTTCCGTGGGAGCCGTGGTAACTCTGGATGCCCA TCTGGAGGTCGGTGCCACGCAGGAGATCGTTGACGTCACCGCGGATGCGCCGGTAGTCGAGACCAGCCGCTCCCAGACTT CCACAGTCGTCGATCAAAAAGCGATCGCCAATCTGCCGATCAACGGCCGCAACTTCCTGGATTTCGCCGTCCTCACCCCA GGCGTGGTGCGCGATCCCTCGCGCGGCGGCGATCTGAGCTTTGGCGGCCAGCGCGGCACCTCCAACAGTCTCACGGTGGA TGGCTCCGACGCGAACAACGTCTTCTTCGGGCAGTCCGCCGGGCGCGCAGGCACCGGCCGTAGTCCGTACAGCTTCAGCC AGGACTCGGTACAGGAATTCCAGGTCTCCGCCAATGGCTATGCGGCGGAAGTGGGCCGCGCGGGCGGCGGCGTGATCAAC GTGATTACCAAGAGCGGCACGAACGACTGGCACGGAACTGCCTTCGAGTTCTTCCGTGACAAATCGATGAATGCCAACAG CTGGGAAAACAACCGGGCAAGACTGCCCAAGCGCAACTACCATTTCAATCAGTTTGGCGGCAACCTGGGCGGCCCCATCG TGAAGAACAAGGCATTCTTCTTTTTCGATTACGACGGGCAGCGCAACAACGAACCGATTACCGTGATTCCTGGCGCGGCC GCTCCGGCGGATGATCTTTCGCAGCAGGCATTCCAATCGCTACAGAAATACTTCGCCGCCTATCCGCGCAGCCTCAATAA TAATGTCTACCTCGCAAAGGTGGATCTCGTCCTGAGTTCGGCCCAGCGCCTCTCCGTCCGCTACAACGCCAATCGTTTTA CCGGTGTGAATTATGAGAACTCCGGATCGACCAGCGCCGCCGGCCACACAGGGAACAGCAGCGTGACCACCGACAGCGTT TCCGCGAACCACACGCTTGTGCTCTCCAGCGCTTCGGTTCTCGATTCGCGTGTGACCTATTCGCGCGACAATGAACCCGG CGCCGCCAACTCCACCGATCCGGAGGCGGTGATCCGGCAGGGTGGCGCGACCGTGATCAATATCGGGCGGAACAATTTCA GCCCCCGGTACACCAACGCCCGCACCATCCAGTGGGCGGAGAGCCTTTCGGTACTTCGCGGCCGCCACACCTTCAAGGCC GGACTCGATATGAACTTTCAGCATATCGACAACTTCTTCCCCGGCAATTTCAGCGGATCGTACACCTTCAACAGCTATGC CGACTTCGCTTCCAACAAACCCTTCAGCTTTACCCAGGCCTTTGCCGGCGCCGGAACCGATGGACCGCTCTCCACTCCCA ACGTCAATGAGTACGCCTTCTACGTTCAGGATTCGTGGCGCGTGTCCGAACAACTCACGTTGAACTACGGCCTTCGTTAC GATCTCTTCGACCTGGCGAACCCCCAGGTGACGAATCCCGACCCGGGCCTCGCGGCAGCTAATTTGAATACCAGTCTGAT ACCGATCGATAAGAACAATATCGGCGGAAGGCTCGGCTTCGCATACCGGCTGACCAAGTCTGGTGACACGGTGGTACGCG GCGGCGTGGGCAATTATTACGCGCGGACGCCGAGCATCATGACGGGCACTGCGTTCACGCAAAATGGAATTCAGGTGCAG ACCTATACGCTCACCGCCAATCTGCCGTCCTATCCCAACGTGCTCTCAGCGCCGCCGCCGTTGAATCGGACTCCCGATAT CTACGTATTCGCGAAGGATTACGTGCAACCCCTCACCTGGCAGTGGAGCCTGAACCTCGAGCATCAGTTGGGACGCGACT ACGCAGTGACTCTCGGTTACCTCGGCGTCCGCGGGGAGCACTTGAGCCGCACGCGCGATATCAATTTCCTGCCGGCAGTG CCGCAACAGGGAACCTTCGCGGACGGCACGCCCGTCGTCTACCTGCGACACCCCGGCCGCGCCAATCCCGCATTCGGCCG CATCAGTCTGTTCGATAGCGGAGCCGACTCCATCTATCACGGCGGATTCGTCCAACTCTCCAAGCGCTTCTCCCACAACT TCCAGGTGCAGACCTCCTATACCTTCTCCAAGGTGATCGACTCACGGCCCGACTTCACCTCCGTAGTGGTGGGAACCGAC GACAGTAAGAATGCCCAGGACACGCTCGCTCCGAATCAGGAGCGCGGCCGGGGCAATGCGGATATCAGCCATCGCTTCAT CTTTTCGGGTGTGTGGGACATCAACTACGGCAAATCCCTGCAGAACGCCATCGCGCGCAATCTCCTGCGCGGATATCAGC TCTCGCTGATCGGAACGCTGCAGAGCGGCCGTCCCCTCACGGCCACTGTCGGCGGAGATCCGAATGGCGACACCAACACC GCTACGGACCGCCCACCCTTCGTCGGGCGCAACACGTACACCGGACCCAACTTCGACAACGTGGACATCCGGTTTACCCG CGATATCCCGCTCTATCGCGACCGCGCGGCGCTCCGCCTGATGTTCGAAGCCTTCAACCTCACCAATCGCGCCAACTTCA ACAGCATCACGACCGCGCAATACAACTTCAATGCGGCCACTCGCGTGTTCACCCCCAACGCGACGTTCCTGTTCCCGACC ACCACCTACGACCCGCGCATCCTGCAATTAGCTGCAAAGGTGACATTCTAA
Upstream 100 bases:
>100_bases CCGAATTTTCCCTCGCAACACCCGTTCGCCGCTGGGAGAAAACTCACGTTTACGGAGCCGCAGTTGAATAAATTGAAACA AGACGATGGGACACTGGAGC
Downstream 100 bases:
>100_bases GACTCCAGGCGCGACGACGCGGTTCGCCATTTGAGCTACAGCATGCGAGGTATTGCCGGATCGGTCACACTCCCGTAAAC TATCAGGGGGGAGAACGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 976; Mature: 976
Protein sequence:
>976_residues MRKHICGLAVGLLLCAVTGTAQEIGGATINGSVTDPSGALIAGARVTATQTATGAQRTTQTSSAGLYTLSALPAGAYDVT IEGTGFKQAKFAAVPVSVGAVVTLDAHLEVGATQEIVDVTADAPVVETSRSQTSTVVDQKAIANLPINGRNFLDFAVLTP GVVRDPSRGGDLSFGGQRGTSNSLTVDGSDANNVFFGQSAGRAGTGRSPYSFSQDSVQEFQVSANGYAAEVGRAGGGVIN VITKSGTNDWHGTAFEFFRDKSMNANSWENNRARLPKRNYHFNQFGGNLGGPIVKNKAFFFFDYDGQRNNEPITVIPGAA APADDLSQQAFQSLQKYFAAYPRSLNNNVYLAKVDLVLSSAQRLSVRYNANRFTGVNYENSGSTSAAGHTGNSSVTTDSV SANHTLVLSSASVLDSRVTYSRDNEPGAANSTDPEAVIRQGGATVINIGRNNFSPRYTNARTIQWAESLSVLRGRHTFKA GLDMNFQHIDNFFPGNFSGSYTFNSYADFASNKPFSFTQAFAGAGTDGPLSTPNVNEYAFYVQDSWRVSEQLTLNYGLRY DLFDLANPQVTNPDPGLAAANLNTSLIPIDKNNIGGRLGFAYRLTKSGDTVVRGGVGNYYARTPSIMTGTAFTQNGIQVQ TYTLTANLPSYPNVLSAPPPLNRTPDIYVFAKDYVQPLTWQWSLNLEHQLGRDYAVTLGYLGVRGEHLSRTRDINFLPAV PQQGTFADGTPVVYLRHPGRANPAFGRISLFDSGADSIYHGGFVQLSKRFSHNFQVQTSYTFSKVIDSRPDFTSVVVGTD DSKNAQDTLAPNQERGRGNADISHRFIFSGVWDINYGKSLQNAIARNLLRGYQLSLIGTLQSGRPLTATVGGDPNGDTNT ATDRPPFVGRNTYTGPNFDNVDIRFTRDIPLYRDRAALRLMFEAFNLTNRANFNSITTAQYNFNAATRVFTPNATFLFPT TTYDPRILQLAAKVTF
Sequences:
>Translated_976_residues MRKHICGLAVGLLLCAVTGTAQEIGGATINGSVTDPSGALIAGARVTATQTATGAQRTTQTSSAGLYTLSALPAGAYDVT IEGTGFKQAKFAAVPVSVGAVVTLDAHLEVGATQEIVDVTADAPVVETSRSQTSTVVDQKAIANLPINGRNFLDFAVLTP GVVRDPSRGGDLSFGGQRGTSNSLTVDGSDANNVFFGQSAGRAGTGRSPYSFSQDSVQEFQVSANGYAAEVGRAGGGVIN VITKSGTNDWHGTAFEFFRDKSMNANSWENNRARLPKRNYHFNQFGGNLGGPIVKNKAFFFFDYDGQRNNEPITVIPGAA APADDLSQQAFQSLQKYFAAYPRSLNNNVYLAKVDLVLSSAQRLSVRYNANRFTGVNYENSGSTSAAGHTGNSSVTTDSV SANHTLVLSSASVLDSRVTYSRDNEPGAANSTDPEAVIRQGGATVINIGRNNFSPRYTNARTIQWAESLSVLRGRHTFKA GLDMNFQHIDNFFPGNFSGSYTFNSYADFASNKPFSFTQAFAGAGTDGPLSTPNVNEYAFYVQDSWRVSEQLTLNYGLRY DLFDLANPQVTNPDPGLAAANLNTSLIPIDKNNIGGRLGFAYRLTKSGDTVVRGGVGNYYARTPSIMTGTAFTQNGIQVQ TYTLTANLPSYPNVLSAPPPLNRTPDIYVFAKDYVQPLTWQWSLNLEHQLGRDYAVTLGYLGVRGEHLSRTRDINFLPAV PQQGTFADGTPVVYLRHPGRANPAFGRISLFDSGADSIYHGGFVQLSKRFSHNFQVQTSYTFSKVIDSRPDFTSVVVGTD DSKNAQDTLAPNQERGRGNADISHRFIFSGVWDINYGKSLQNAIARNLLRGYQLSLIGTLQSGRPLTATVGGDPNGDTNT ATDRPPFVGRNTYTGPNFDNVDIRFTRDIPLYRDRAALRLMFEAFNLTNRANFNSITTAQYNFNAATRVFTPNATFLFPT TTYDPRILQLAAKVTF >Mature_976_residues MRKHICGLAVGLLLCAVTGTAQEIGGATINGSVTDPSGALIAGARVTATQTATGAQRTTQTSSAGLYTLSALPAGAYDVT IEGTGFKQAKFAAVPVSVGAVVTLDAHLEVGATQEIVDVTADAPVVETSRSQTSTVVDQKAIANLPINGRNFLDFAVLTP GVVRDPSRGGDLSFGGQRGTSNSLTVDGSDANNVFFGQSAGRAGTGRSPYSFSQDSVQEFQVSANGYAAEVGRAGGGVIN VITKSGTNDWHGTAFEFFRDKSMNANSWENNRARLPKRNYHFNQFGGNLGGPIVKNKAFFFFDYDGQRNNEPITVIPGAA APADDLSQQAFQSLQKYFAAYPRSLNNNVYLAKVDLVLSSAQRLSVRYNANRFTGVNYENSGSTSAAGHTGNSSVTTDSV SANHTLVLSSASVLDSRVTYSRDNEPGAANSTDPEAVIRQGGATVINIGRNNFSPRYTNARTIQWAESLSVLRGRHTFKA GLDMNFQHIDNFFPGNFSGSYTFNSYADFASNKPFSFTQAFAGAGTDGPLSTPNVNEYAFYVQDSWRVSEQLTLNYGLRY DLFDLANPQVTNPDPGLAAANLNTSLIPIDKNNIGGRLGFAYRLTKSGDTVVRGGVGNYYARTPSIMTGTAFTQNGIQVQ TYTLTANLPSYPNVLSAPPPLNRTPDIYVFAKDYVQPLTWQWSLNLEHQLGRDYAVTLGYLGVRGEHLSRTRDINFLPAV PQQGTFADGTPVVYLRHPGRANPAFGRISLFDSGADSIYHGGFVQLSKRFSHNFQVQTSYTFSKVIDSRPDFTSVVVGTD DSKNAQDTLAPNQERGRGNADISHRFIFSGVWDINYGKSLQNAIARNLLRGYQLSLIGTLQSGRPLTATVGGDPNGDTNT ATDRPPFVGRNTYTGPNFDNVDIRFTRDIPLYRDRAALRLMFEAFNLTNRANFNSITTAQYNFNAATRVFTPNATFLFPT TTYDPRILQLAAKVTF
Specific function: Required for cellular adhesion during fruiting body formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013784 - InterPro: IPR014766 - InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 105429; Mature: 105429
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKHICGLAVGLLLCAVTGTAQEIGGATINGSVTDPSGALIAGARVTATQTATGAQRTTQ CCCHHHHHHHHHHHHHHCCCHHHHCCEEEECCEECCCCCEEECCEEEEECCCCCCCCCCC TSSAGLYTLSALPAGAYDVTIEGTGFKQAKFAAVPVSVGAVVTLDAHLEVGATQEIVDVT CCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEEEECCEEEEEECCEECCCCHHEEEEC ADAPVVETSRSQTSTVVDQKAIANLPINGRNFLDFAVLTPGVVRDPSRGGDLSFGGQRGT CCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC SNSLTVDGSDANNVFFGQSAGRAGTGRSPYSFSQDSVQEFQVSANGYAAEVGRAGGGVIN CCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEECCCCCCCEEE VITKSGTNDWHGTAFEFFRDKSMNANSWENNRARLPKRNYHFNQFGGNLGGPIVKNKAFF EEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCEEE FFDYDGQRNNEPITVIPGAAAPADDLSQQAFQSLQKYFAAYPRSLNNNVYLAKVDLVLSS EEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHC AQRLSVRYNANRFTGVNYENSGSTSAAGHTGNSSVTTDSVSANHTLVLSSASVLDSRVTY CCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECHHHHHCCCEE SRDNEPGAANSTDPEAVIRQGGATVINIGRNNFSPRYTNARTIQWAESLSVLRGRHTFKA CCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEC GLDMNFQHIDNFFPGNFSGSYTFNSYADFASNKPFSFTQAFAGAGTDGPLSTPNVNEYAF CCCCCHHHHHCCCCCCCCCCEEECCHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCEEE YVQDSWRVSEQLTLNYGLRYDLFDLANPQVTNPDPGLAAANLNTSLIPIDKNNIGGRLGF EEECCCCCCEEEEEECCCEEEEHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEE AYRLTKSGDTVVRGGVGNYYARTPSIMTGTAFTQNGIQVQTYTLTANLPSYPNVLSAPPP EEEEECCCCEEEECCCCCCEECCCCEEECCEEECCCEEEEEEEEEECCCCCCCCCCCCCC LNRTPDIYVFAKDYVQPLTWQWSLNLEHQLGRDYAVTLGYLGVRGEHLSRTRDINFLPAV CCCCCCEEEEEHHCCCCEEEEEEECCHHHCCCCEEEEEEEEECCCHHHHHHCCCEEECCC PQQGTFADGTPVVYLRHPGRANPAFGRISLFDSGADSIYHGGFVQLSKRFSHNFQVQTSY CCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHCCCCHHHHHHHCCCCEEEEECC TFSKVIDSRPDFTSVVVGTDDSKNAQDTLAPNQERGRGNADISHRFIFSGVWDINYGKSL CHHHHHCCCCCCEEEEEECCCCCCCHHHCCCCHHCCCCCCCCCEEEEEEEEEECCCCHHH QNAIARNLLRGYQLSLIGTLQSGRPLTATVGGDPNGDTNTATDRPPFVGRNTYTGPNFDN HHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VDIRFTRDIPLYRDRAALRLMFEAFNLTNRANFNSITTAQYNFNAATRVFTPNATFLFPT EEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEECCCCEEEEEC TTYDPRILQLAAKVTF CCCCCHHEEEEEECCC >Mature Secondary Structure MRKHICGLAVGLLLCAVTGTAQEIGGATINGSVTDPSGALIAGARVTATQTATGAQRTTQ CCCHHHHHHHHHHHHHHCCCHHHHCCEEEECCEECCCCCEEECCEEEEECCCCCCCCCCC TSSAGLYTLSALPAGAYDVTIEGTGFKQAKFAAVPVSVGAVVTLDAHLEVGATQEIVDVT CCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEEEECCEEEEEECCEECCCCHHEEEEC ADAPVVETSRSQTSTVVDQKAIANLPINGRNFLDFAVLTPGVVRDPSRGGDLSFGGQRGT CCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC SNSLTVDGSDANNVFFGQSAGRAGTGRSPYSFSQDSVQEFQVSANGYAAEVGRAGGGVIN CCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEECCCCCCCEEE VITKSGTNDWHGTAFEFFRDKSMNANSWENNRARLPKRNYHFNQFGGNLGGPIVKNKAFF EEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCEEE FFDYDGQRNNEPITVIPGAAAPADDLSQQAFQSLQKYFAAYPRSLNNNVYLAKVDLVLSS EEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHC AQRLSVRYNANRFTGVNYENSGSTSAAGHTGNSSVTTDSVSANHTLVLSSASVLDSRVTY CCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECHHHHHCCCEE SRDNEPGAANSTDPEAVIRQGGATVINIGRNNFSPRYTNARTIQWAESLSVLRGRHTFKA CCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEC GLDMNFQHIDNFFPGNFSGSYTFNSYADFASNKPFSFTQAFAGAGTDGPLSTPNVNEYAF CCCCCHHHHHCCCCCCCCCCEEECCHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCEEE YVQDSWRVSEQLTLNYGLRYDLFDLANPQVTNPDPGLAAANLNTSLIPIDKNNIGGRLGF EEECCCCCCEEEEEECCCEEEEHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEE AYRLTKSGDTVVRGGVGNYYARTPSIMTGTAFTQNGIQVQTYTLTANLPSYPNVLSAPPP EEEEECCCCEEEECCCCCCEECCCCEEECCEEECCCEEEEEEEEEECCCCCCCCCCCCCC LNRTPDIYVFAKDYVQPLTWQWSLNLEHQLGRDYAVTLGYLGVRGEHLSRTRDINFLPAV CCCCCCEEEEEHHCCCCEEEEEEECCHHHCCCCEEEEEEEEECCCHHHHHHCCCEEECCC PQQGTFADGTPVVYLRHPGRANPAFGRISLFDSGADSIYHGGFVQLSKRFSHNFQVQTSY CCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHCCCCHHHHHHHCCCCEEEEECC TFSKVIDSRPDFTSVVVGTDDSKNAQDTLAPNQERGRGNADISHRFIFSGVWDINYGKSL CHHHHHCCCCCCEEEEEECCCCCCCHHHCCCCHHCCCCCCCCCEEEEEEEEEECCCCHHH QNAIARNLLRGYQLSLIGTLQSGRPLTATVGGDPNGDTNTATDRPPFVGRNTYTGPNFDN HHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VDIRFTRDIPLYRDRAALRLMFEAFNLTNRANFNSITTAQYNFNAATRVFTPNATFLFPT EEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEECCCCEEEEEC TTYDPRILQLAAKVTF CCCCCHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335633 [H]