| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yefM [C]
Identifier: 116623004
GI number: 116623004
Start: 4942125
End: 4942505
Strand: Direct
Name: yefM [C]
Synonym: Acid_3908
Alternate gene names: 116623004
Gene position: 4942125-4942505 (Clockwise)
Preceding gene: 116623003
Following gene: 116623005
Centisome position: 49.59
GC content: 58.01
Gene sequence:
>381_bases ATGTCTTTCGTGCACGATGTCGGGGGACTACCAGGATTGAGGGCATCGCCGTACCCGTACAGGAACACTGTACAATACGG ACAGGGGTGCGTTACGCCCAGGGAAACTACATATACGAGTCTGCGTGAAAATCTCGCCAGCGTTCTTGACGAAGTGGTCG ACAACCAGGATACGGTGATTGTCCGGCGACGGGGAGCCCGCGACGTCGCCCTGCTTCCTGCCACCGAACTCGCTGGCCTC TTGGAAACTGCGCATTTGCTACGCTCACCACGCAACGCTCGACGTCTTCTGGGGGCGCTACGCCAAGCAGAACGTGGAAA AACGAAGCCCGAAACCGCATCGGAATTGAGGCGAGAGATCCTCGGTGAAGCGAGAGCGTAA
Upstream 100 bases:
>100_bases TCGAACTGTTGTTGTCGTAGGCGAACCGCATGGGGAAACGGCCCGAACCCTTATATTCCCCGTCCAGTGACTTCCGTGCG GCCACTTTCCGGTAAGCCTG
Downstream 100 bases:
>100_bases ACGGGTTGCGATCTTTCAACCTGAGTTCCGGGAGGATCTGCGTTTTTGGGGCAAAACGGAACGAAGCGCCGCAATCAGAG TGCTGGATCTTATTGAAGCG
Product: prevent-host-death family protein
Products: NA
Alternate protein names: Addiction Module Antitoxin Axe Family Protein; Prevent-Host-Death Protein
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSFVHDVGGLPGLRASPYPYRNTVQYGQGCVTPRETTYTSLRENLASVLDEVVDNQDTVIVRRRGARDVALLPATELAGL LETAHLLRSPRNARRLLGALRQAERGKTKPETASELRREILGEARA
Sequences:
>Translated_126_residues MSFVHDVGGLPGLRASPYPYRNTVQYGQGCVTPRETTYTSLRENLASVLDEVVDNQDTVIVRRRGARDVALLPATELAGL LETAHLLRSPRNARRLLGALRQAERGKTKPETASELRREILGEARA >Mature_125_residues SFVHDVGGLPGLRASPYPYRNTVQYGQGCVTPRETTYTSLRENLASVLDEVVDNQDTVIVRRRGARDVALLPATELAGLL ETAHLLRSPRNARRLLGALRQAERGKTKPETASELRREILGEARA
Specific function: Unknown
COG id: COG2161
COG function: function code D; Antitoxin of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13923; Mature: 13792
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVHDVGGLPGLRASPYPYRNTVQYGQGCVTPRETTYTSLRENLASVLDEVVDNQDTVI CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE VRRRGARDVALLPATELAGLLETAHLLRSPRNARRLLGALRQAERGKTKPETASELRREI EECCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LGEARA HHHCCC >Mature Secondary Structure SFVHDVGGLPGLRASPYPYRNTVQYGQGCVTPRETTYTSLRENLASVLDEVVDNQDTVI CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE VRRRGARDVALLPATELAGLLETAHLLRSPRNARRLLGALRQAERGKTKPETASELRREI EECCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LGEARA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA