| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622965
Identifier: 116622965
GI number: 116622965
Start: 4902540
End: 4903169
Strand: Direct
Name: 116622965
Synonym: Acid_3868
Alternate gene names: NA
Gene position: 4902540-4903169 (Clockwise)
Preceding gene: 116622963
Following gene: 116622974
Centisome position: 49.19
GC content: 67.94
Gene sequence:
>630_bases ATGACACCTGGGATCACGCGCGCGGCCGATGTCCGACGAGGCGTACGCCTCGAGTACTTCACGATCGGCTACAACAGCCT GGAAGCCGCGATTGCGTTGATCGCCGGGTTGCTGGCTGGCAGTGTCGCGCTGGTGGGTTTTGGATTGGACTCGGTGGTGG AGGTGACTTCGGGCGCGGCGTTGCTCTGGCGTCTGCACGGCGACACGGATGCCTCGCGGTGTGCGATCCGGGAGGCGTGG GCGCTCAAGGCCGTGGGGTTCTGCTTCCTGGCGCTGGCGGCGTACGTGGCTTACGAGGCAGGCGAATCGTTGGTGCTGCA ACGCGCGCCGGCGCGCAGTCCGGTGGGGATCGCGCTGGCGGCGATCTCGCTGGTGGTGATGCCCTTTCTGGCACGCGCCA AGCGGGGCGTGGCGTCGCGGATTTCGAGCGCGGCAATGCACGCCGATTCCCGGCAGACCGATTTCTGCGCATACCTTTCG GCGATCCTGCTGGCCGGGCTGCTGCTCAATGCCCTGGCGGGCTGGTGGTGGGCGGATCCCCTGGCCGGCCTCGCGATGGT GCCGATTGTCGCCCGCGAAGGGTGGAATGCGCTGCGCGGCAGGAGCTGTTCCGGGTGCGGATGCAGCTAA
Upstream 100 bases:
>100_bases TCGACATTGAGGTCCTCTCTTTCCCCGGAGTGTCCTCGTTTGGGCGTCCGGGTCCGGTCAGTATATATGAATTCGGCGTG CGGGCGTTAAGCTGGTAGAG
Downstream 100 bases:
>100_bases CGGACTAGCCTCCTCCGGCGCCCGATTTTGACTCACGCGTATGTCGAAGGTGATCCACGATCGTCTTCCACTCCGGCGTG ATCGGCTTGGCGAGCGATTC
Product: integral membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein; Cation Efflux Family Protein; Co/Zn/Cd Cation Transporter; Co/Zn/Cd Cation Transporters-Like Protein; CoZn:Cd Cation Transporter
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTPGITRAADVRRGVRLEYFTIGYNSLEAAIALIAGLLAGSVALVGFGLDSVVEVTSGAALLWRLHGDTDASRCAIREAW ALKAVGFCFLALAAYVAYEAGESLVLQRAPARSPVGIALAAISLVVMPFLARAKRGVASRISSAAMHADSRQTDFCAYLS AILLAGLLLNALAGWWWADPLAGLAMVPIVAREGWNALRGRSCSGCGCS
Sequences:
>Translated_209_residues MTPGITRAADVRRGVRLEYFTIGYNSLEAAIALIAGLLAGSVALVGFGLDSVVEVTSGAALLWRLHGDTDASRCAIREAW ALKAVGFCFLALAAYVAYEAGESLVLQRAPARSPVGIALAAISLVVMPFLARAKRGVASRISSAAMHADSRQTDFCAYLS AILLAGLLLNALAGWWWADPLAGLAMVPIVAREGWNALRGRSCSGCGCS >Mature_208_residues TPGITRAADVRRGVRLEYFTIGYNSLEAAIALIAGLLAGSVALVGFGLDSVVEVTSGAALLWRLHGDTDASRCAIREAWA LKAVGFCFLALAAYVAYEAGESLVLQRAPARSPVGIALAAISLVVMPFLARAKRGVASRISSAAMHADSRQTDFCAYLSA ILLAGLLLNALAGWWWADPLAGLAMVPIVAREGWNALRGRSCSGCGCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21840; Mature: 21708
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPGITRAADVRRGVRLEYFTIGYNSLEAAIALIAGLLAGSVALVGFGLDSVVEVTSGAA CCCCCCHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCE LLWRLHGDTDASRCAIREAWALKAVGFCFLALAAYVAYEAGESLVLQRAPARSPVGIALA EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHH AISLVVMPFLARAKRGVASRISSAAMHADSRQTDFCAYLSAILLAGLLLNALAGWWWADP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGLAMVPIVAREGWNALRGRSCSGCGCS HHHHHHHHHHHHCCCHHHCCCCCCCCCCC >Mature Secondary Structure TPGITRAADVRRGVRLEYFTIGYNSLEAAIALIAGLLAGSVALVGFGLDSVVEVTSGAA CCCCCHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCE LLWRLHGDTDASRCAIREAWALKAVGFCFLALAAYVAYEAGESLVLQRAPARSPVGIALA EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHH AISLVVMPFLARAKRGVASRISSAAMHADSRQTDFCAYLSAILLAGLLLNALAGWWWADP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGLAMVPIVAREGWNALRGRSCSGCGCS HHHHHHHHHHHHCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA