Click here to switch to the map view.

The map label for this gene is ygeA [C]

Identifier: 116622963

GI number: 116622963

Start: 4901319

End: 4901987

Strand: Direct

Name: ygeA [C]

Synonym: Acid_3866

Alternate gene names: 116622963

Gene position: 4901319-4901987 (Clockwise)

Preceding gene: 116622962

Following gene: 116622965

Centisome position: 49.18

GC content: 64.13

Gene sequence:

>669_bases
ATGCGACAACTGGGATGGATCGGCGGGCTTGGTCCAGGGGCTACGGTGCACTATTACCGCGAGTTGGTGAAAGCCGGCGC
CGGTGAAGCGCTGATGGTGCATGCGGACATGGCCCATGCCTTGGGCCACGTGACGCGCGGCGATCGCATCGGCCTGGCGG
ATTATTTCGCGCGCCTGATCGAGCGGCTGGCGCGGGGCGGCGCCGAGGTGGCGGCGATCTCGGCGATCACGCCGCACATC
TGCATCCGCGAACTGGAGAAGATCTCGCCGCTGCCGCTGGTAAACATCGTCGCGGTGACCGGCGAAGAGATCCGGAAGCG
CGGGTACCGGCAGGTCGCGCTGTTCGGGACGCGCTTCGTAGTGGAGTCACGCATGTTCGGAATGCTCGAAGGGGTGGAAG
TGGTGGTGCCGGAGCAATCCGCGGCGATTCACGAGAATTACATGCGCCTCGTGGAGGGCGAGAGCGGCGAGGCCAGGAGA
GCTTTGGTGGAAATTGCGCGGGAGCTGCGGGTGGACGCCATCGTGCTTGCGGGCACGGACCTCAACCTGGTGTTTGACGA
GAGCACGGCCGGCTTCCCCTGCCTGGACGCGGCGCAAGCGCACGTTCTGGCAATTGTCAAGGAGTTACAGGCGGTTTCGG
GTGATGTTACTACGATGTTACCTAACTAG

Upstream 100 bases:

>100_bases
AGTGCAGCGAACCAGGGGCTGCCGCGGGCGCCTGGGCTCCGGCAGCGATCGATATGACGAGCAGAACAGCCATCCGGTGC
ATATGCCTTAAAGTATAGTC

Downstream 100 bases:

>100_bases
TACTAACCTATCTGTACGAAATCATCGGAATCAGTCAAGATCGAAGTGCGGCCTCAGTAGTTCCTGTTCACGCTCTTCAC
GTTCCCGTTCCAGTCGCGGA

Product: Asp/Glu racemase

Products: D-aspartate

Alternate protein names: Asp/Glu Racemase; Resistance Protein; Amino Acid Recemase; Racemase; Asp/Glu RacemaseAspartate Racemase; Aspartate/Glutamate Racemace Protein; Aspartate Racemase Protein; Aspartate/Glutamate Racemase Superfamily Protein; Aspartate/Glutamate Racemase

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MRQLGWIGGLGPGATVHYYRELVKAGAGEALMVHADMAHALGHVTRGDRIGLADYFARLIERLARGGAEVAAISAITPHI
CIRELEKISPLPLVNIVAVTGEEIRKRGYRQVALFGTRFVVESRMFGMLEGVEVVVPEQSAAIHENYMRLVEGESGEARR
ALVEIARELRVDAIVLAGTDLNLVFDESTAGFPCLDAAQAHVLAIVKELQAVSGDVTTMLPN

Sequences:

>Translated_222_residues
MRQLGWIGGLGPGATVHYYRELVKAGAGEALMVHADMAHALGHVTRGDRIGLADYFARLIERLARGGAEVAAISAITPHI
CIRELEKISPLPLVNIVAVTGEEIRKRGYRQVALFGTRFVVESRMFGMLEGVEVVVPEQSAAIHENYMRLVEGESGEARR
ALVEIARELRVDAIVLAGTDLNLVFDESTAGFPCLDAAQAHVLAIVKELQAVSGDVTTMLPN
>Mature_222_residues
MRQLGWIGGLGPGATVHYYRELVKAGAGEALMVHADMAHALGHVTRGDRIGLADYFARLIERLARGGAEVAAISAITPHI
CIRELEKISPLPLVNIVAVTGEEIRKRGYRQVALFGTRFVVESRMFGMLEGVEVVVPEQSAAIHENYMRLVEGESGEARR
ALVEIARELRVDAIVLAGTDLNLVFDESTAGFPCLDAAQAHVLAIVKELQAVSGDVTTMLPN

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789205, Length=221, Percent_Identity=28.0542986425339, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.1.1.13

Molecular weight: Translated: 23994; Mature: 23994

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQLGWIGGLGPGATVHYYRELVKAGAGEALMVHADMAHALGHVTRGDRIGLADYFARLI
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHH
ERLARGGAEVAAISAITPHICIRELEKISPLPLVNIVAVTGEEIRKRGYRQVALFGTRFV
HHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCEEHHHHHHHH
VESRMFGMLEGVEVVVPEQSAAIHENYMRLVEGESGEARRALVEIARELRVDAIVLAGTD
HHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCC
LNLVFDESTAGFPCLDAAQAHVLAIVKELQAVSGDVTTMLPN
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MRQLGWIGGLGPGATVHYYRELVKAGAGEALMVHADMAHALGHVTRGDRIGLADYFARLI
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHH
ERLARGGAEVAAISAITPHICIRELEKISPLPLVNIVAVTGEEIRKRGYRQVALFGTRFV
HHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCEEHHHHHHHH
VESRMFGMLEGVEVVVPEQSAAIHENYMRLVEGESGEARRALVEIARELRVDAIVLAGTD
HHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCC
LNLVFDESTAGFPCLDAAQAHVLAIVKELQAVSGDVTTMLPN
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA