| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622935
Identifier: 116622935
GI number: 116622935
Start: 4868407
End: 4869993
Strand: Direct
Name: 116622935
Synonym: Acid_3837
Alternate gene names: NA
Gene position: 4868407-4869993 (Clockwise)
Preceding gene: 116622934
Following gene: 116622938
Centisome position: 48.85
GC content: 64.21
Gene sequence:
>1587_bases ATGCGTCTCCTGGCATTGCTTCTGTTCCCCTTCTTGCTCGCCGCGCAAGATAACCTCTGCGAAGTCTCCGGCAGCGTCGT CAACGCGCTCACCGGCGAACCCATACGCCACGCGCAGGTTACTCTGCGCCGCATCGATACCGCACCCGGCGCGACTTCCA GCGTTGCCACCGATTCCTCCGGCAACTTCGCCGCCACGCTCGAGCCCGGCACTTACCGAATCTCCGCCGACCACACCGGC TTCATCCCCGCGCAGTTGGGCGCGCGCGGCCCCAGCAAACCGAGCCCGCCGCTGGTCCTCACCGCCGGCCGCAAAACCAC CGGCCAGCGCATCAACCTTTATCCCCAGGGCGTCATCAGCGGCCGCATTGTCGATGAGGATGGCGAGCCCGTGCCCAACG TCGATGTCCAGGTTTCCCGCCTGCAATATATGGCGGGCCGCAAGCAGCTCTCCCGCTCCAACAGCCGCATGACCAACGAT CTGGGCGAATACCGCATCTTCGGACTCTCGCCCGGGCGCTACTACCTCAACGCCGTCTACCGCTCCGATCCCACCCTTGC CGGCGAAGGCCAGTACGTGTCCACGTATTACCCGCGCACCCCTGACCCGGCCGCCGCCGCGCCGCTCGAGATCGTCCCAG GGTCTCAACTCGGCAACATCGATGTCACGCTGGTCCGCATACGCACGGTCACCGTGAAGGGCCGCGTTATCAGCGAAAGT GGCGGGGGCGACATCCACATGATCCTTTCGGCGAGCAATCCCCTCGGGGCCGCGAACGAGAATGGCCGCGGAGCCGCGGT CTTGCCCGATGGCGGTTTCGAATTCCGCAACGTCATCCCTGGAAGCTACCAGTTGATCGCCATACAGAGCGCGCCAGGGA AGGCCTACAGCAGCCGCATCCCGCTTCAGGTCGGGGCCGGCAACATCGAGGGCGTCGTGCTCACGCTCCACGCCCCGCTC AATATCGCAGGCGAGATCAAAGTAGAAGGCGAGACCACCGAGAATCTCTCCCGCACCCGCATCGGACTGCAACCCTTCGA TCCCGGTAACATCGTCGTAGGCCCAATGCCCGACCTGGCCCTCAAGCCCGATCGAACTTTCCTACTGCCCGACCTCAGCG CGGAGCATTACCGAATCGTCGTCAACAATCTCCCCGATGGCTTCTATGTGAAATCCATCCGCAGCGCCGAGGTTAACGTG CAACTCGCCGGCCTCGATCTCACCGCCGGCGCCTCCTCCCCGCTCGAAATCGTCCTCAGCCCCAACGCCGGCGCGCTCAC CGGCACGGTGGTGGATCCCAGGACTCAAAAACCCGTCACCGGCGGAACCGTAGTCCTGGTCCCGCAGGACAAGGAACGCC GCACTCGCGAATCCTTTTACCGCACCGCCTCCACCGACCTGGGCGGCCAGTACACTTTCAAAAACCTCATCCCCGGCGAT TACAAAGCCTTCTGCTGGGACGACGTCCCCTACGGCTCCTGGATGGACCCCGACTTCATGACTTCTCAGGAATCCCGCGG CACCGCCATTAGCATCCCCGAGCGCACGCCCCAATCCCTCCAACTCACCCTGCTCACGGAGCAGTAG
Upstream 100 bases:
>100_bases TCTTCTATCTCAGCGCCACCGTGCACTCCGCCATCGCAACCTGGCGCGGACAGGGAGGCATGTGGAAAGGTCGCGCCCAG AGCGCTACCCTGCAATAGAG
Downstream 100 bases:
>100_bases CGCCCACTCCATTTTGCAGCGAGCTCCGCGCAATAGTGGGGCATGGTTTAGCTTGCCCGTCCCGAGTTTTCACGCCTTGC GTAAAGGGAGCGATCTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MRLLALLLFPFLLAAQDNLCEVSGSVVNALTGEPIRHAQVTLRRIDTAPGATSSVATDSSGNFAATLEPGTYRISADHTG FIPAQLGARGPSKPSPPLVLTAGRKTTGQRINLYPQGVISGRIVDEDGEPVPNVDVQVSRLQYMAGRKQLSRSNSRMTND LGEYRIFGLSPGRYYLNAVYRSDPTLAGEGQYVSTYYPRTPDPAAAAPLEIVPGSQLGNIDVTLVRIRTVTVKGRVISES GGGDIHMILSASNPLGAANENGRGAAVLPDGGFEFRNVIPGSYQLIAIQSAPGKAYSSRIPLQVGAGNIEGVVLTLHAPL NIAGEIKVEGETTENLSRTRIGLQPFDPGNIVVGPMPDLALKPDRTFLLPDLSAEHYRIVVNNLPDGFYVKSIRSAEVNV QLAGLDLTAGASSPLEIVLSPNAGALTGTVVDPRTQKPVTGGTVVLVPQDKERRTRESFYRTASTDLGGQYTFKNLIPGD YKAFCWDDVPYGSWMDPDFMTSQESRGTAISIPERTPQSLQLTLLTEQ
Sequences:
>Translated_528_residues MRLLALLLFPFLLAAQDNLCEVSGSVVNALTGEPIRHAQVTLRRIDTAPGATSSVATDSSGNFAATLEPGTYRISADHTG FIPAQLGARGPSKPSPPLVLTAGRKTTGQRINLYPQGVISGRIVDEDGEPVPNVDVQVSRLQYMAGRKQLSRSNSRMTND LGEYRIFGLSPGRYYLNAVYRSDPTLAGEGQYVSTYYPRTPDPAAAAPLEIVPGSQLGNIDVTLVRIRTVTVKGRVISES GGGDIHMILSASNPLGAANENGRGAAVLPDGGFEFRNVIPGSYQLIAIQSAPGKAYSSRIPLQVGAGNIEGVVLTLHAPL NIAGEIKVEGETTENLSRTRIGLQPFDPGNIVVGPMPDLALKPDRTFLLPDLSAEHYRIVVNNLPDGFYVKSIRSAEVNV QLAGLDLTAGASSPLEIVLSPNAGALTGTVVDPRTQKPVTGGTVVLVPQDKERRTRESFYRTASTDLGGQYTFKNLIPGD YKAFCWDDVPYGSWMDPDFMTSQESRGTAISIPERTPQSLQLTLLTEQ >Mature_528_residues MRLLALLLFPFLLAAQDNLCEVSGSVVNALTGEPIRHAQVTLRRIDTAPGATSSVATDSSGNFAATLEPGTYRISADHTG FIPAQLGARGPSKPSPPLVLTAGRKTTGQRINLYPQGVISGRIVDEDGEPVPNVDVQVSRLQYMAGRKQLSRSNSRMTND LGEYRIFGLSPGRYYLNAVYRSDPTLAGEGQYVSTYYPRTPDPAAAAPLEIVPGSQLGNIDVTLVRIRTVTVKGRVISES GGGDIHMILSASNPLGAANENGRGAAVLPDGGFEFRNVIPGSYQLIAIQSAPGKAYSSRIPLQVGAGNIEGVVLTLHAPL NIAGEIKVEGETTENLSRTRIGLQPFDPGNIVVGPMPDLALKPDRTFLLPDLSAEHYRIVVNNLPDGFYVKSIRSAEVNV QLAGLDLTAGASSPLEIVLSPNAGALTGTVVDPRTQKPVTGGTVVLVPQDKERRTRESFYRTASTDLGGQYTFKNLIPGD YKAFCWDDVPYGSWMDPDFMTSQESRGTAISIPERTPQSLQLTLLTEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56510; Mature: 56510
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLALLLFPFLLAAQDNLCEVSGSVVNALTGEPIRHAQVTLRRIDTAPGATSSVATDSS CHHHHHHHHHHHHHCCCCCEECCCHHHHHHCCCCCHHHEEEEEEECCCCCCCCCEEECCC GNFAATLEPGTYRISADHTGFIPAQLGARGPSKPSPPLVLTAGRKTTGQRINLYPQGVIS CCEEEEECCCEEEEECCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCEEEEEECCEEE GRIVDEDGEPVPNVDVQVSRLQYMAGRKQLSRSNSRMTNDLGEYRIFGLSPGRYYLNAVY CEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCEEEEEEE RSDPTLAGEGQYVSTYYPRTPDPAAAAPLEIVPGSQLGNIDVTLVRIRTVTVKGRVISES ECCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEEEEEEEEEEECC GGGDIHMILSASNPLGAANENGRGAAVLPDGGFEFRNVIPGSYQLIAIQSAPGKAYSSRI CCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCEEEEEEECCCCCHHHCCC PLQVGAGNIEGVVLTLHAPLNIAGEIKVEGETTENLSRTRIGLQPFDPGNIVVGPMPDLA CEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHEECCCCCCCCCEEEECCCCCE LKPDRTFLLPDLSAEHYRIVVNNLPDGFYVKSIRSAEVNVQLAGLDLTAGASSPLEIVLS ECCCCEEEECCCCCCEEEEEEECCCCCEEEEEEECCEEEEEEEEEEEECCCCCCEEEEEC PNAGALTGTVVDPRTQKPVTGGTVVLVPQDKERRTRESFYRTASTDLGGQYTFKNLIPGD CCCCEEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEECCCCCCC YKAFCWDDVPYGSWMDPDFMTSQESRGTAISIPERTPQSLQLTLLTEQ CEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECC >Mature Secondary Structure MRLLALLLFPFLLAAQDNLCEVSGSVVNALTGEPIRHAQVTLRRIDTAPGATSSVATDSS CHHHHHHHHHHHHHCCCCCEECCCHHHHHHCCCCCHHHEEEEEEECCCCCCCCCEEECCC GNFAATLEPGTYRISADHTGFIPAQLGARGPSKPSPPLVLTAGRKTTGQRINLYPQGVIS CCEEEEECCCEEEEECCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCEEEEEECCEEE GRIVDEDGEPVPNVDVQVSRLQYMAGRKQLSRSNSRMTNDLGEYRIFGLSPGRYYLNAVY CEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCEEEEEEE RSDPTLAGEGQYVSTYYPRTPDPAAAAPLEIVPGSQLGNIDVTLVRIRTVTVKGRVISES ECCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEEEEEEEEEEECC GGGDIHMILSASNPLGAANENGRGAAVLPDGGFEFRNVIPGSYQLIAIQSAPGKAYSSRI CCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCEEEEEEECCCCCHHHCCC PLQVGAGNIEGVVLTLHAPLNIAGEIKVEGETTENLSRTRIGLQPFDPGNIVVGPMPDLA CEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHEECCCCCCCCCEEEECCCCCE LKPDRTFLLPDLSAEHYRIVVNNLPDGFYVKSIRSAEVNVQLAGLDLTAGASSPLEIVLS ECCCCEEEECCCCCCEEEEEEECCCCCEEEEEEECCEEEEEEEEEEEECCCCCCEEEEEC PNAGALTGTVVDPRTQKPVTGGTVVLVPQDKERRTRESFYRTASTDLGGQYTFKNLIPGD CCCCEEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEECCCCCCC YKAFCWDDVPYGSWMDPDFMTSQESRGTAISIPERTPQSLQLTLLTEQ CEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA