| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622929
Identifier: 116622929
GI number: 116622929
Start: 4862914
End: 4863306
Strand: Reverse
Name: 116622929
Synonym: Acid_3831
Alternate gene names: NA
Gene position: 4863306-4862914 (Counterclockwise)
Preceding gene: 116622931
Following gene: 116622928
Centisome position: 48.8
GC content: 65.39
Gene sequence:
>393_bases ATGAGTTTTCTCGACAACCTCGAAAACAACTTAAAGAGCCTGGAATCGAGCGAGCAGGGCAAGGAAGACGCGGAGCGCGC GCAGCGGACCCGGGAACAGGAGCGCGCCCGCGCGCAGGCGGCAGCGCCGTTCGCGGACCAGCTGAAAAACGGGCCGTACA CGGCGGAGCTTCTGAAGCAGGCGGCAAGGGTGGGCTTCAGCCTGCGTACGAAAGTTCACATCGCGTGGCTGGGCAGTTCG CTGCGCCTCGAAGCGCGGGAAAAGCGGCTGGAGCTGCGCCCGACGGCCGCGGGCATCGTGACGGTGTACATCGAAAACGG ACAGGAAGTGCGAAGCGAGCCGCTGGACCTGGTGGGAAGTCCGGAGGCACTGGTGCGGGGCTGGCTGGCGTAA
Upstream 100 bases:
>100_bases GCTATCGAGCAGCGATTTGTGGAGGCGGAGCAGGCCGTCGCGGACTTCTTTCATGCGGGGACGAAAGTCGGACACGCGAC TATCGTATCGTGAAAGAAGC
Downstream 100 bases:
>100_bases GATTTGAACTTATGCGGAAACCCGGCTTCGACCCTGGGCTGACCCAGCAATACACCGGTAATGTCCGGCGGATCGTTGAA AAGGACGGGCGTTTTAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSFLDNLENNLKSLESSEQGKEDAERAQRTREQERARAQAAAPFADQLKNGPYTAELLKQAARVGFSLRTKVHIAWLGSS LRLEAREKRLELRPTAAGIVTVYIENGQEVRSEPLDLVGSPEALVRGWLA
Sequences:
>Translated_130_residues MSFLDNLENNLKSLESSEQGKEDAERAQRTREQERARAQAAAPFADQLKNGPYTAELLKQAARVGFSLRTKVHIAWLGSS LRLEAREKRLELRPTAAGIVTVYIENGQEVRSEPLDLVGSPEALVRGWLA >Mature_129_residues SFLDNLENNLKSLESSEQGKEDAERAQRTREQERARAQAAAPFADQLKNGPYTAELLKQAARVGFSLRTKVHIAWLGSSL RLEAREKRLELRPTAAGIVTVYIENGQEVRSEPLDLVGSPEALVRGWLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14488; Mature: 14356
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLDNLENNLKSLESSEQGKEDAERAQRTREQERARAQAAAPFADQLKNGPYTAELLKQ CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHH AARVGFSLRTKVHIAWLGSSLRLEAREKRLELRPTAAGIVTVYIENGQEVRSEPLDLVGS HHHCCCHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCC PEALVRGWLA CHHHHHHCCC >Mature Secondary Structure SFLDNLENNLKSLESSEQGKEDAERAQRTREQERARAQAAAPFADQLKNGPYTAELLKQ CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHH AARVGFSLRTKVHIAWLGSSLRLEAREKRLELRPTAAGIVTVYIENGQEVRSEPLDLVGS HHHCCCHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCC PEALVRGWLA CHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA