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The map label for this gene is yfiH [C]

Identifier: 116622879

GI number: 116622879

Start: 4801301

End: 4801942

Strand: Direct

Name: yfiH [C]

Synonym: Acid_3780

Alternate gene names: 116622879

Gene position: 4801301-4801942 (Clockwise)

Preceding gene: 116622878

Following gene: 116622880

Centisome position: 48.18

GC content: 63.71

Gene sequence:

>642_bases
GTGTTCTACCGGGACCCGCAACATATCTACCGCGTTACTGAATTGGATGCGCTGCCTTGGCTCGTCCATGGATTCGGCAC
GCGGCTGGCCGATATTCCGGCACAATTCGCACAACTCGCCACCGTGAAACAGATCCACTCGTCCACCTGCCTGGCTGCCG
GCGGACGCCGCGGAGTAATCGGCGAGGGTGATGCACTGCTCGAGAATACGCCGGGCGGAGTGGTTGCGGTGAAGACCGCC
GATTGCATTCCGGTGCTACTGATCGATGAGCGCCAGAAGGTTGTCGCCGCGGTGCATGCCGGCTGGCGCGGTACCGCGGG
GCGAATTGCAGCCGGGGCGCTGGAGGCGATGCGGGAGCGATTTGCCACAAGGGTAGAGGACGTGCACGCGGCCATCGGTC
CGGGGATCGGCAAGTGCTGCTATGAAGTCGGAGCCGAGGTCGCGGCGCTGTTCGGCGAGCGAGGGCGGGCGCACATCGAT
CTGGCGGCGGAGAATCGGCGGCAATTGGAAGAGATTGGCGTAACTCCATCGAAGATCTATGCGTCGAACTTGTGCACCAT
GTGCCGGGCCGAGGAGTTTCATTCCTTCCGGCGCGACAAAGAGGCGGCCGGCAGGCTGCATTCGTTCGCCGGCATCCGGT
AG

Upstream 100 bases:

>100_bases
GCTGGTGAAGCGCCCCACCGAAGTGCGGTTGGACGAGACCATGCTGGAAGAGTTCAAACAGCAGATCCGCATCGCCCAGA
TTCAGAATCCCGCATAAATC

Downstream 100 bases:

>100_bases
GCCTGACGGGCCGCGCGGTACATTGATAAGAGAGGCGTTACATGTTCACGTGGATCTGCCCGCAATGCGGGCGCGAAGTT
CCTCCTGCTTACGACGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MFYRDPQHIYRVTELDALPWLVHGFGTRLADIPAQFAQLATVKQIHSSTCLAAGGRRGVIGEGDALLENTPGGVVAVKTA
DCIPVLLIDERQKVVAAVHAGWRGTAGRIAAGALEAMRERFATRVEDVHAAIGPGIGKCCYEVGAEVAALFGERGRAHID
LAAENRRQLEEIGVTPSKIYASNLCTMCRAEEFHSFRRDKEAAGRLHSFAGIR

Sequences:

>Translated_213_residues
MFYRDPQHIYRVTELDALPWLVHGFGTRLADIPAQFAQLATVKQIHSSTCLAAGGRRGVIGEGDALLENTPGGVVAVKTA
DCIPVLLIDERQKVVAAVHAGWRGTAGRIAAGALEAMRERFATRVEDVHAAIGPGIGKCCYEVGAEVAALFGERGRAHID
LAAENRRQLEEIGVTPSKIYASNLCTMCRAEEFHSFRRDKEAAGRLHSFAGIR
>Mature_213_residues
MFYRDPQHIYRVTELDALPWLVHGFGTRLADIPAQFAQLATVKQIHSSTCLAAGGRRGVIGEGDALLENTPGGVVAVKTA
DCIPVLLIDERQKVVAAVHAGWRGTAGRIAAGALEAMRERFATRVEDVHAAIGPGIGKCCYEVGAEVAALFGERGRAHID
LAAENRRQLEEIGVTPSKIYASNLCTMCRAEEFHSFRRDKEAAGRLHSFAGIR

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=164, Percent_Identity=30.4878048780488, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI190194372, Length=164, Percent_Identity=30.4878048780488, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1788945, Length=180, Percent_Identity=37.7777777777778, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 23047; Mature: 23047

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYRDPQHIYRVTELDALPWLVHGFGTRLADIPAQFAQLATVKQIHSSTCLAAGGRRGVI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GEGDALLENTPGGVVAVKTADCIPVLLIDERQKVVAAVHAGWRGTAGRIAAGALEAMRER
CCCCHHEECCCCCEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
FATRVEDVHAAIGPGIGKCCYEVGAEVAALFGERGRAHIDLAAENRRQLEEIGVTPSKIY
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCHHHHH
ASNLCTMCRAEEFHSFRRDKEAAGRLHSFAGIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFYRDPQHIYRVTELDALPWLVHGFGTRLADIPAQFAQLATVKQIHSSTCLAAGGRRGVI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GEGDALLENTPGGVVAVKTADCIPVLLIDERQKVVAAVHAGWRGTAGRIAAGALEAMRER
CCCCHHEECCCCCEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
FATRVEDVHAAIGPGIGKCCYEVGAEVAALFGERGRAHIDLAAENRRQLEEIGVTPSKIY
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCHHHHH
ASNLCTMCRAEEFHSFRRDKEAAGRLHSFAGIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961408; 11466286 [H]