Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116622857

Identifier: 116622857

GI number: 116622857

Start: 4775417

End: 4776043

Strand: Reverse

Name: 116622857

Synonym: Acid_3758

Alternate gene names: NA

Gene position: 4776043-4775417 (Counterclockwise)

Preceding gene: 116622863

Following gene: 116622856

Centisome position: 47.93

GC content: 59.01

Gene sequence:

>627_bases
ATGATTAAGCAATTGCAATGCCTTGCTGCGGCGGGCGCGTTGAGCCTGGCATTGGCAGTGAATCCCCTCGCGGCAGCACC
GGATGACGGTACGAATACCTTTAACATGCTTGTCTCGGCCGGAGCGAAAACCTGCTTGGCCAACGCCACCGCCACGGTGA
AGATCAGACCGACCGGCGCAGTAGACATCATGGAGGTCACCGCGGACGGCCTGCCGGCCAACACGAATTTCAATGTGTTC
GTTATCCAGGTTCCCAAAGCGCAATTCGGCGTCGCATGGTATCAAGGCGATCTCGTGACCGATAAAAAGGGCCGCGCCCG
CCAGGAATTCACCGGCCGTTTCAATATCGAGACCTTCTCGACCGCGCAGGGCAGTGTACCGGCTCCGCTCGTCTTCACCG
ACGGCCCGTTCCCGGACGCCTCCACCAATCCGTCTTTCAATCCGATTCAGATGTACCACCTCGGCATCTGGTTCGACTCC
CCGCTGGACGCTCAGAATGCCGGTTGCCCTGCGACCGTCACTCCTTTCGGCGGGAACCACCAGGCCGGCCTTCAGATTTT
CAACACGAGCAATTCCCCTGATGATCACGGTCCCCTGAAGGACACCGGTACCTCAACCAAGCACTAA

Upstream 100 bases:

>100_bases
TTTCACAAATCTTTGACAAGGAATCCCCGGACCTGCCCCTCGGATTCCGCTTGTTCAATTGAAGGGCAATCGAAGCCCTA
ACTTTGAATTGGAGATATGA

Downstream 100 bases:

>100_bases
CCATCTGCTCCTCCCCCGGCCGGGTCTCCCCGGCCGGTGGTTTTTCTTGTATGATGTGGACGGCGCGATCAGGGCGCCGC
CGTGTCCGCGGAAAGGACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MIKQLQCLAAAGALSLALAVNPLAAAPDDGTNTFNMLVSAGAKTCLANATATVKIRPTGAVDIMEVTADGLPANTNFNVF
VIQVPKAQFGVAWYQGDLVTDKKGRARQEFTGRFNIETFSTAQGSVPAPLVFTDGPFPDASTNPSFNPIQMYHLGIWFDS
PLDAQNAGCPATVTPFGGNHQAGLQIFNTSNSPDDHGPLKDTGTSTKH

Sequences:

>Translated_208_residues
MIKQLQCLAAAGALSLALAVNPLAAAPDDGTNTFNMLVSAGAKTCLANATATVKIRPTGAVDIMEVTADGLPANTNFNVF
VIQVPKAQFGVAWYQGDLVTDKKGRARQEFTGRFNIETFSTAQGSVPAPLVFTDGPFPDASTNPSFNPIQMYHLGIWFDS
PLDAQNAGCPATVTPFGGNHQAGLQIFNTSNSPDDHGPLKDTGTSTKH
>Mature_208_residues
MIKQLQCLAAAGALSLALAVNPLAAAPDDGTNTFNMLVSAGAKTCLANATATVKIRPTGAVDIMEVTADGLPANTNFNVF
VIQVPKAQFGVAWYQGDLVTDKKGRARQEFTGRFNIETFSTAQGSVPAPLVFTDGPFPDASTNPSFNPIQMYHLGIWFDS
PLDAQNAGCPATVTPFGGNHQAGLQIFNTSNSPDDHGPLKDTGTSTKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21838; Mature: 21838

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQLQCLAAAGALSLALAVNPLAAAPDDGTNTFNMLVSAGAKTCLANATATVKIRPTGA
CCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEECCCEEEEEEECCCC
VDIMEVTADGLPANTNFNVFVIQVPKAQFGVAWYQGDLVTDKKGRARQEFTGRFNIETFS
EEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCEEECCCCCCCHHHCCEEEEEEEC
TAQGSVPAPLVFTDGPFPDASTNPSFNPIQMYHLGIWFDSPLDAQNAGCPATVTPFGGNH
CCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCCC
QAGLQIFNTSNSPDDHGPLKDTGTSTKH
CCCEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIKQLQCLAAAGALSLALAVNPLAAAPDDGTNTFNMLVSAGAKTCLANATATVKIRPTGA
CCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEECCCEEEEEEECCCC
VDIMEVTADGLPANTNFNVFVIQVPKAQFGVAWYQGDLVTDKKGRARQEFTGRFNIETFS
EEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCEEECCCCCCCHHHCCEEEEEEEC
TAQGSVPAPLVFTDGPFPDASTNPSFNPIQMYHLGIWFDSPLDAQNAGCPATVTPFGGNH
CCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCCC
QAGLQIFNTSNSPDDHGPLKDTGTSTKH
CCCEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA