Click here to switch to the map view.

The map label for this gene is 116622856

Identifier: 116622856

GI number: 116622856

Start: 4773619

End: 4775220

Strand: Reverse

Name: 116622856

Synonym: Acid_3757

Alternate gene names: NA

Gene position: 4775220-4773619 (Counterclockwise)

Preceding gene: 116622857

Following gene: 116622855

Centisome position: 47.92

GC content: 66.92

Gene sequence:

>1602_bases
ATGAAACCATCGCTACCCACCCGCCGGATGCGCGAGCATCCGGATCTCGAACAACTCAAGCGCCAGGCCAAGGAACTGCT
CCGCGGATTTACCGCGGGCGAGCCCGAGGCTGCCGCCGAAGTCGCCGCCCACTACCGCGCCCCCGACGCCTCCACCTTCG
CACTCCACCACGCGCAGCTCGTCATCGCCAGAAGCTACGGCTTCGATAGCTGGCCCAAACTCAAGGCCTACGTAGATGGC
GTGACCGTGCGGCGTCTTGCCGATGCCGTTCGCGCCGGCGATCTCTCCCAGGTCCGCGCCGTGCTGCACACCCGGCCCGA
GCTCGCCGACATGCAGATGTCCTACGGCGATGAGCACCGCCCCCTCCATTTCGCCGTGATGCACCGCCTGCCGGAGATCG
TGAAGCTGCTCATGCGGCACGGCGCCAACGCACGCGCCGGAATCCACCCGCACCGCGACGCCACCTCCGCGTTGACCCTC
GCGAAGGAGCGCGGCTACCACGAGATCGTCGCCATTATCGAACAGGAAGAGCAGCCCGAGGCCGATACCGAATCCACGCC
CGAGGACGTCCGCGGCGACGAAGCCGCCCGTGCCGCTGTAGCAGCGGGCGATCTCGAGTGGGTTCGCGCACAGCACGCCG
CCGGCACGCTCGTAAATCCAGTCCGTTGGGATGACGGCGGCCTGCTCACCGTCGCCGTGCGGAACAAGCGGCCGCAGATG
CTCGCCCTGCTTCTGGATTGCGGCCTCGACCCGAACGAGCGCGTATCCGAGGGCGAAGGCGATTGGGTCGCCTACTCCCA
GGGTTATCCGCTCTGGAATGCAGCCGCGCTCGGCAACTTGGAAATCGCCGAGCTGCTCCTCCGCCGCGGCGCCGATCCCA
ACGTCCATGTCGATTCCAGCGGTTCGTCGGTCTACAGCGCCTTCAGCCACAAGCAATGGGAGATGGTGGAGTTGCTGCGC
CGTCACGGCGGCGTGGTGACCGCCGACACCGCGGCCATCTACCGCCAGACCGAACTGGTGCGCCAGATGCTCGAGGCCGA
CCCTCGCAAGGAACTGGCCGAGGAGATGCTACGCTTCGCCGCAAGCGGCGGCGACGTGGAGATCGTGCGTATGACCCTCG
CTCGAATCGACTGGCCGCGCGACGATCCGCGCTGGTTCCGCATTCTGACCGAGCCGCTCTACTTTTGGCATTTCATTCCC
TGGCTCTACGCCGGAAATCGCGAGCTCGATCGCACGACCTGGCTCCCGTGCTTCCGTCTCATCCTGGGGCGCTGCCAACC
AAATATCCCGGGAAGCTTCGGCCGGACAGTTCTTCATGAGGTCGGCGCCATGCGCAATCACATCACCCAGGAAGAATCCA
CCGCGTTCGCCGCCGCCCTCCTCGACGCCGGCGCCAGAGTGGACCTCCGCGATGACATCCTGAAGAGCACGCCTCTCGGC
TGGGCCTGCCGCTGGGGCCGCACCGAAGTTGTCCGGCTCCTCCTCTCGCGCGGCGCCGACCCCGAAGAACTCGACGCCGA
ACCCTGGGCGCGCCCCCGTGCCTGGGCCGAGAAGATGGGCCACGCCGACATCCTGGTAGTACTCAACGAGCCGCGACCGT
GA

Upstream 100 bases:

>100_bases
ACTGAGTCCTCCTGAGACTTCGCCTTCTGCGGAAGATGTTTTCGATGAACTCTTTTCTGCCCGAGACAGCGGACACTGGG
CGCACTGGAAAGGAGCTCAC

Downstream 100 bases:

>100_bases
GGCAGCGCAACGAAGTCCAGCCCCACGCGCAGCGTACCGCCTCAGAGCCGCGACCGCTAGGGAGCGATCTCTTGTTGGAT
GTAGCCTATTCCATATGGAT

Product: ankyrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MKPSLPTRRMREHPDLEQLKRQAKELLRGFTAGEPEAAAEVAAHYRAPDASTFALHHAQLVIARSYGFDSWPKLKAYVDG
VTVRRLADAVRAGDLSQVRAVLHTRPELADMQMSYGDEHRPLHFAVMHRLPEIVKLLMRHGANARAGIHPHRDATSALTL
AKERGYHEIVAIIEQEEQPEADTESTPEDVRGDEAARAAVAAGDLEWVRAQHAAGTLVNPVRWDDGGLLTVAVRNKRPQM
LALLLDCGLDPNERVSEGEGDWVAYSQGYPLWNAAALGNLEIAELLLRRGADPNVHVDSSGSSVYSAFSHKQWEMVELLR
RHGGVVTADTAAIYRQTELVRQMLEADPRKELAEEMLRFAASGGDVEIVRMTLARIDWPRDDPRWFRILTEPLYFWHFIP
WLYAGNRELDRTTWLPCFRLILGRCQPNIPGSFGRTVLHEVGAMRNHITQEESTAFAAALLDAGARVDLRDDILKSTPLG
WACRWGRTEVVRLLLSRGADPEELDAEPWARPRAWAEKMGHADILVVLNEPRP

Sequences:

>Translated_533_residues
MKPSLPTRRMREHPDLEQLKRQAKELLRGFTAGEPEAAAEVAAHYRAPDASTFALHHAQLVIARSYGFDSWPKLKAYVDG
VTVRRLADAVRAGDLSQVRAVLHTRPELADMQMSYGDEHRPLHFAVMHRLPEIVKLLMRHGANARAGIHPHRDATSALTL
AKERGYHEIVAIIEQEEQPEADTESTPEDVRGDEAARAAVAAGDLEWVRAQHAAGTLVNPVRWDDGGLLTVAVRNKRPQM
LALLLDCGLDPNERVSEGEGDWVAYSQGYPLWNAAALGNLEIAELLLRRGADPNVHVDSSGSSVYSAFSHKQWEMVELLR
RHGGVVTADTAAIYRQTELVRQMLEADPRKELAEEMLRFAASGGDVEIVRMTLARIDWPRDDPRWFRILTEPLYFWHFIP
WLYAGNRELDRTTWLPCFRLILGRCQPNIPGSFGRTVLHEVGAMRNHITQEESTAFAAALLDAGARVDLRDDILKSTPLG
WACRWGRTEVVRLLLSRGADPEELDAEPWARPRAWAEKMGHADILVVLNEPRP
>Mature_533_residues
MKPSLPTRRMREHPDLEQLKRQAKELLRGFTAGEPEAAAEVAAHYRAPDASTFALHHAQLVIARSYGFDSWPKLKAYVDG
VTVRRLADAVRAGDLSQVRAVLHTRPELADMQMSYGDEHRPLHFAVMHRLPEIVKLLMRHGANARAGIHPHRDATSALTL
AKERGYHEIVAIIEQEEQPEADTESTPEDVRGDEAARAAVAAGDLEWVRAQHAAGTLVNPVRWDDGGLLTVAVRNKRPQM
LALLLDCGLDPNERVSEGEGDWVAYSQGYPLWNAAALGNLEIAELLLRRGADPNVHVDSSGSSVYSAFSHKQWEMVELLR
RHGGVVTADTAAIYRQTELVRQMLEADPRKELAEEMLRFAASGGDVEIVRMTLARIDWPRDDPRWFRILTEPLYFWHFIP
WLYAGNRELDRTTWLPCFRLILGRCQPNIPGSFGRTVLHEVGAMRNHITQEESTAFAAALLDAGARVDLRDDILKSTPLG
WACRWGRTEVVRLLLSRGADPEELDAEPWARPRAWAEKMGHADILVVLNEPRP

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59856; Mature: 59856

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSLPTRRMREHPDLEQLKRQAKELLRGFTAGEPEAAAEVAAHYRAPDASTFALHHAQL
CCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHEE
VIARSYGFDSWPKLKAYVDGVTVRRLADAVRAGDLSQVRAVLHTRPELADMQMSYGDEHR
EEEECCCCCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCC
PLHFAVMHRLPEIVKLLMRHGANARAGIHPHRDATSALTLAKERGYHEIVAIIEQEEQPE
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCC
ADTESTPEDVRGDEAARAAVAAGDLEWVRAQHAAGTLVNPVRWDDGGLLTVAVRNKRPQM
CCCCCCCHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCHHH
LALLLDCGLDPNERVSEGEGDWVAYSQGYPLWNAAALGNLEIAELLLRRGADPNVHVDSS
HHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCHHHHHHHHHCCCCCCEEECCC
GSSVYSAFSHKQWEMVELLRRHGGVVTADTAAIYRQTELVRQMLEADPRKELAEEMLRFA
CCHHHHHHHCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ASGGDVEIVRMTLARIDWPRDDPRWFRILTEPLYFWHFIPWLYAGNRELDRTTWLPCFRL
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ILGRCQPNIPGSFGRTVLHEVGAMRNHITQEESTAFAAALLDAGARVDLRDDILKSTPLG
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
WACRWGRTEVVRLLLSRGADPEELDAEPWARPRAWAEKMGHADILVVLNEPRP
CEECCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure
MKPSLPTRRMREHPDLEQLKRQAKELLRGFTAGEPEAAAEVAAHYRAPDASTFALHHAQL
CCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHEE
VIARSYGFDSWPKLKAYVDGVTVRRLADAVRAGDLSQVRAVLHTRPELADMQMSYGDEHR
EEEECCCCCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCC
PLHFAVMHRLPEIVKLLMRHGANARAGIHPHRDATSALTLAKERGYHEIVAIIEQEEQPE
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCC
ADTESTPEDVRGDEAARAAVAAGDLEWVRAQHAAGTLVNPVRWDDGGLLTVAVRNKRPQM
CCCCCCCHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCHHH
LALLLDCGLDPNERVSEGEGDWVAYSQGYPLWNAAALGNLEIAELLLRRGADPNVHVDSS
HHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCHHHHHHHHHCCCCCCEEECCC
GSSVYSAFSHKQWEMVELLRRHGGVVTADTAAIYRQTELVRQMLEADPRKELAEEMLRFA
CCHHHHHHHCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ASGGDVEIVRMTLARIDWPRDDPRWFRILTEPLYFWHFIPWLYAGNRELDRTTWLPCFRL
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ILGRCQPNIPGSFGRTVLHEVGAMRNHITQEESTAFAAALLDAGARVDLRDDILKSTPLG
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
WACRWGRTEVVRLLLSRGADPEELDAEPWARPRAWAEKMGHADILVVLNEPRP
CEECCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA