| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622799
Identifier: 116622799
GI number: 116622799
Start: 4699544
End: 4700938
Strand: Direct
Name: 116622799
Synonym: Acid_3699
Alternate gene names: NA
Gene position: 4699544-4700938 (Clockwise)
Preceding gene: 116622795
Following gene: 116622800
Centisome position: 47.16
GC content: 62.08
Gene sequence:
>1395_bases ATGATTGCCGGCATGACGGCATCATCCATCGGTCTGCTGTTTCTCGCGGGGGCCGGGACAAGTCCGGCGCAATCGAACGA TACGGCACTGATCGCCAGGGCTAAGGCGATCCACAGCCGCGTTATCAAGCTCGACACGCACAACGATATCGAGCCCGCGA ACTTCACGCCGGACTGCAACTACACCATGCGGCTGACGACGCAGGTCAATATTCCGAAGATGGTGGAGGGCGGCATGGAC GTTTCGTTTATGATCGCGTACGTGGGCCAGGGCCCGCTCACACCCGAGGGGTTCGACGACGCATACCGGCAGGTGGTCGC GAAGTTCGATGCCGTTCATCGCCTGACGGAAAAGATCGCACCCGACAATATCGGACTGGCGCTCACTCCGGCCGACGTGC TGGCGTTGCACAAGAAGAACCTCCGGATCGCGGTGATCGGTATCGAGAACGGATATCCCATCGGGAACGACATCAAGCGG GTGAAGGAGTTCTACGACCGCGGCGGCCGTTATATGTCCCTGGCTCACAATGGCAACAGCCAGTTGGCCGATTCGAATAC CGGGGAAGTTCAGGGCTACCTGTACAACAATGGACTTTCTCCCCTGGGGCGCGAGGTCATCGCCGAGATGAATCGCCTGG GCATGATGGTCGATCTCTCGCATCCTTCGAAGGGCGCGAACATGGAAGCCATCCGGCTTTCCAAGGCTCCGGTCATCGCA TCGCACTCCGGCGTCCGCGCGCTCGCCGACGTCAGCCGGAATATGGACGACGAGCAGTTGCTGGCGTTGAAAAAGAATGG CGGCGTGATTCAGGTGGTGGGCTTCACGTCTTATGTGAAGACGGATTCGAAAGAACGCACCGAGGCGCTCGCGAAGTTGC GGGAAGAGTTTGGGCTGACTCAGGCGGCTGGACGCGGAGGCGCGGGATTCGGCGGAGGCCGCGGACGCGGCGGCGCCGCG GCGAATACGTCGCGGACGTGCCCCGTAGAGGTGCCCGGAGCTGCGCCGCAGGTTCGTGGAGCGGGCGGAGGCCGGGGGCG GGGAAATGCGGCGCTCGAGGCGCTTTCGCCGGAGCGGCGCGCCGATTATGACAAGCGGCTGGCGGAGATCGATACCAAGT TTCCGGCCGCGAGCCGTGCCAACGTCAAGGACTTTGTGAATCACATCGATTACGCGGTGAAGCTGATTGGAATCGATCAC GTGGGGATTTCGTCGGACTTCGACGGCGGCGGCGGAATCGATGGGTGGAACAGCGCGGCGGAGGCATTCAACGTGACGCT GGAACTGGTGCGCCGCGGTTACACCGAAGAACAGATCGGGAAGCTGTGGAGCGGCAATCTGCTGCGGGTGTGGGGAGAGG TGGAGAAGGTCGCGCAAAAGCTGCGGAAGGGGTAA
Upstream 100 bases:
>100_bases AGGTGTCCGCCGCGACCCCCGTCGGTCTCGCATTTCAACAACGACTTTTATTGTTTTGCGGTTCCAGGAGAATGCAATGA AAAGCATCCAGCAAAAGCTC
Downstream 100 bases:
>100_bases GCGAACGGCAGGCCATTGGTTGGAGGTAGAGGGAATCGCCAAGCATCCCCGCCGGGTGTTACATGCTTTCGGCCGCACAA TCCGCAGCGCTACGGCACAT
Product: membrane dipeptidase
Products: NA
Alternate protein names: Dipeptidase; Peptidase; Renal Dipeptidase Family Protein; Glutamine Amidotransferase Class II/Dipeptidase; Glutamine Amidotransferase; Renal Dipeptidase Superfamily; Periplasmic Dipeptidase; Zn-Dependent Dipeptidase; Dipeptidase Family Protein; Microsomal Dipeptidase; Renal Dipeptidase; M19 Family Peptidase; Thermostable Dipeptidase; Multidrug Resistance Protein B; Zn-Dependent Dipeptidase Microsomal Dipeptidase; Membrane Dipeptidase Family; Renal Dipeptidase Superfamily Protein; Dipeptidase Protein; Amma-Glutamyl Hydrolase Family Peptidase; Microsomal Dipeptidase Like Protein; Dipeptidase Bdp; Membrane-Bound Dipeptidase; Microsomal Dipeptidase-Like Protein; Dipeptidase Pyoverdin Biosynthesis; Ipeptidase AC. Metallo Peptidase. MEROPS Family M; LOW QUALITY PROTEIN Dipeptidase
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MIAGMTASSIGLLFLAGAGTSPAQSNDTALIARAKAIHSRVIKLDTHNDIEPANFTPDCNYTMRLTTQVNIPKMVEGGMD VSFMIAYVGQGPLTPEGFDDAYRQVVAKFDAVHRLTEKIAPDNIGLALTPADVLALHKKNLRIAVIGIENGYPIGNDIKR VKEFYDRGGRYMSLAHNGNSQLADSNTGEVQGYLYNNGLSPLGREVIAEMNRLGMMVDLSHPSKGANMEAIRLSKAPVIA SHSGVRALADVSRNMDDEQLLALKKNGGVIQVVGFTSYVKTDSKERTEALAKLREEFGLTQAAGRGGAGFGGGRGRGGAA ANTSRTCPVEVPGAAPQVRGAGGGRGRGNAALEALSPERRADYDKRLAEIDTKFPAASRANVKDFVNHIDYAVKLIGIDH VGISSDFDGGGGIDGWNSAAEAFNVTLELVRRGYTEEQIGKLWSGNLLRVWGEVEKVAQKLRKG
Sequences:
>Translated_464_residues MIAGMTASSIGLLFLAGAGTSPAQSNDTALIARAKAIHSRVIKLDTHNDIEPANFTPDCNYTMRLTTQVNIPKMVEGGMD VSFMIAYVGQGPLTPEGFDDAYRQVVAKFDAVHRLTEKIAPDNIGLALTPADVLALHKKNLRIAVIGIENGYPIGNDIKR VKEFYDRGGRYMSLAHNGNSQLADSNTGEVQGYLYNNGLSPLGREVIAEMNRLGMMVDLSHPSKGANMEAIRLSKAPVIA SHSGVRALADVSRNMDDEQLLALKKNGGVIQVVGFTSYVKTDSKERTEALAKLREEFGLTQAAGRGGAGFGGGRGRGGAA ANTSRTCPVEVPGAAPQVRGAGGGRGRGNAALEALSPERRADYDKRLAEIDTKFPAASRANVKDFVNHIDYAVKLIGIDH VGISSDFDGGGGIDGWNSAAEAFNVTLELVRRGYTEEQIGKLWSGNLLRVWGEVEKVAQKLRKG >Mature_464_residues MIAGMTASSIGLLFLAGAGTSPAQSNDTALIARAKAIHSRVIKLDTHNDIEPANFTPDCNYTMRLTTQVNIPKMVEGGMD VSFMIAYVGQGPLTPEGFDDAYRQVVAKFDAVHRLTEKIAPDNIGLALTPADVLALHKKNLRIAVIGIENGYPIGNDIKR VKEFYDRGGRYMSLAHNGNSQLADSNTGEVQGYLYNNGLSPLGREVIAEMNRLGMMVDLSHPSKGANMEAIRLSKAPVIA SHSGVRALADVSRNMDDEQLLALKKNGGVIQVVGFTSYVKTDSKERTEALAKLREEFGLTQAAGRGGAGFGGGRGRGGAA ANTSRTCPVEVPGAAPQVRGAGGGRGRGNAALEALSPERRADYDKRLAEIDTKFPAASRANVKDFVNHIDYAVKLIGIDH VGISSDFDGGGGIDGWNSAAEAFNVTLELVRRGYTEEQIGKLWSGNLLRVWGEVEKVAQKLRKG
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI11641269, Length=207, Percent_Identity=36.7149758454106, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI189458885, Length=256, Percent_Identity=29.296875, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI4758190, Length=256, Percent_Identity=29.296875, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI193211608, Length=248, Percent_Identity=29.8387096774194, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI193211610, Length=248, Percent_Identity=29.4354838709677, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI221475880, Length=273, Percent_Identity=31.1355311355311, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI161083233, Length=205, Percent_Identity=34.1463414634146, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI281362638, Length=249, Percent_Identity=30.5220883534137, Blast_Score=125, Evalue=8e-29, Organism=Drosophila melanogaster, GI281362636, Length=249, Percent_Identity=30.5220883534137, Blast_Score=125, Evalue=8e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49534; Mature: 49534
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAGMTASSIGLLFLAGAGTSPAQSNDTALIARAKAIHSRVIKLDTHNDIEPANFTPDCN CCCCCCHHCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHEEEECCCCCCCCCCCCCCCC YTMRLTTQVNIPKMVEGGMDVSFMIAYVGQGPLTPEGFDDAYRQVVAKFDAVHRLTEKIA EEEEEEEEECCHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PDNIGLALTPADVLALHKKNLRIAVIGIENGYPIGNDIKRVKEFYDRGGRYMSLAHNGNS CCCCCEEECHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC QLADSNTGEVQGYLYNNGLSPLGREVIAEMNRLGMMVDLSHPSKGANMEAIRLSKAPVIA CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCEEE SHSGVRALADVSRNMDDEQLLALKKNGGVIQVVGFTSYVKTDSKERTEALAKLREEFGLT CCCCHHHHHHHHCCCCHHHEEEEECCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCC QAAGRGGAGFGGGRGRGGAAANTSRTCPVEVPGAAPQVRGAGGGRGRGNAALEALSPERR HHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCHHH ADYDKRLAEIDTKFPAASRANVKDFVNHIDYAVKLIGIDHVGISSDFDGGGGIDGWNSAA CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHH EAFNVTLELVRRGYTEEQIGKLWSGNLLRVWGEVEKVAQKLRKG HHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHCC >Mature Secondary Structure MIAGMTASSIGLLFLAGAGTSPAQSNDTALIARAKAIHSRVIKLDTHNDIEPANFTPDCN CCCCCCHHCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHEEEECCCCCCCCCCCCCCCC YTMRLTTQVNIPKMVEGGMDVSFMIAYVGQGPLTPEGFDDAYRQVVAKFDAVHRLTEKIA EEEEEEEEECCHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PDNIGLALTPADVLALHKKNLRIAVIGIENGYPIGNDIKRVKEFYDRGGRYMSLAHNGNS CCCCCEEECHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC QLADSNTGEVQGYLYNNGLSPLGREVIAEMNRLGMMVDLSHPSKGANMEAIRLSKAPVIA CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCEEE SHSGVRALADVSRNMDDEQLLALKKNGGVIQVVGFTSYVKTDSKERTEALAKLREEFGLT CCCCHHHHHHHHCCCCHHHEEEEECCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCC QAAGRGGAGFGGGRGRGGAAANTSRTCPVEVPGAAPQVRGAGGGRGRGNAALEALSPERR HHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCHHH ADYDKRLAEIDTKFPAASRANVKDFVNHIDYAVKLIGIDHVGISSDFDGGGGIDGWNSAA CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHH EAFNVTLELVRRGYTEEQIGKLWSGNLLRVWGEVEKVAQKLRKG HHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA