| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622783
Identifier: 116622783
GI number: 116622783
Start: 4674075
End: 4675520
Strand: Direct
Name: 116622783
Synonym: Acid_3682
Alternate gene names: NA
Gene position: 4674075-4675520 (Clockwise)
Preceding gene: 116622782
Following gene: 116622784
Centisome position: 46.9
GC content: 68.19
Gene sequence:
>1446_bases TTGAAAGCCCTCAGGTCACCGCTGCTGTGGATTGCGATCTTGTGCACGGTGCCATTTCTCGTGGGCACCGGCTCGGAGTT TTGGGGCGACGATCGCTTCCTGATTTTCCAGCGACTGGAACCTGGGAGCGGAGCTTCGCCGCTGGAATTCTTCCACCAGG ATTACTGGATGGGTGTCGAGGAGAGCGGCCTGTACCGTCCGGTGGGGCTCTCTTTCCTGCTCGCCGAGCGCGCCTTGTTC GGCACGTGGGAACCCGCCTATCGCGCCGTATCGCTCCTGCTGCATTTCCTGGCGTGCGTGCTGCTCTGGCGCGTCTTCGC GCAGTTAGTGGGGCTGCGCGCGGCCACCGTGGGCGCGCTGATTTTCGCATGCCATCCGATTCACGCCGAGGCGGTGCTGC CGGTCTACGGACAACTGGACCTGCTGGCGGCGGCGCTCCTGGCGGCCGCCTTGCTGGCCAGGCGGGCGGGACGCCACTGG ACCGGAGCGGCAGCATTGGGCCTCGCTTTGTTGTGCAAAGAATCGGCGATCGCGGCGCCGCTGCTGATGTTGTGGCTGGC GTGGACCGCGGCACGGCGGGTAACGGCGGCCGAGCTTCCGTATTGGCCCGTGCTGGGCGCGGTGCTGGCGCTGCGGATCG CAGTGCTCGGCACCGTGGGACTTTCGCGGGAAGCCACGGTGCTGGGCACGGGAGGGATCGGGCTGTGGGCGAACTCGGTG ATTGTGACGGTGGGCCACGCGATCCGGCTGTGTGTGTGGCCCACGGGCCAGACGGTTTACTACGGCCACCTGCGCGACAG CCTGCGCGGGGTTCCGGTGGTGGAGGCGCTGTGGATCTGCGCCGGAATCGCGCTGGTGTGGCTGCTTGCGGGATGGCTGC CGAAAGACTCGACCGCCGTGGCGGCCGGCTGGTTCGCGATCTGCCTGCTGCCGGTGGCGAACGTTGTGCCCATCGGCGTG CTGGTGGCGGAGCGAACGCTCTATCTGCCATCGGCGGGCATCGCGGCGCTGGCGGGATTGTGTTGGGTGAAGGCGGCCGG CGAAGGCCGGAGATGGGTGCACGGCGCGCTGTTGGTGGCGCTGCTGGTTGGCTGCGCAGCGAGTGCGCGGACGGCGTGGC GCTGGCGCACGGAGCTTTCCCTGTGGAGCAGCACGGTGGCCGACCATCCGCGTTCGCCGAAGGCGCACGCGATGTTGGGG CATGCGCTGCTTCGAGAAGCGGACAAGGGGCGAGCGGACGCGCCGGCACTGCTACGTCAGGCGGATCTGAGTTTTTCCGA GGCGCTGAGGCTCAATCCGGGCTCGGTGGACGCGTTGTACGGGCGCGGGCTGGTGTTGAGCCGGGATGGATCCTGCGCGG AGGCGATGCCCTACCTTAGGGATGCCGCGCGGCTGCGGGCCTTCGACCAGGAAATCGAACTGGCGCTGCGGCGCTGCGGT CAGTGA
Upstream 100 bases:
>100_bases CGGTTCGATAATTCACCGGAACCGGGCGGCATCTGGCTGATGGGCGCGGGGCTCGCCGCGGTGCTTGTCGGTTCGATCAG GCGGCGCCCCAGGTCGTGAT
Downstream 100 bases:
>100_bases GTGGGAACAATCACGAGGCGCAGCACTCGTTCCCGATCGAAAAGTTTCGGAATCCGCCGAGGCCCCCGACGCTTCTATAG AAGCGAGGAGCGCGATATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MKALRSPLLWIAILCTVPFLVGTGSEFWGDDRFLIFQRLEPGSGASPLEFFHQDYWMGVEESGLYRPVGLSFLLAERALF GTWEPAYRAVSLLLHFLACVLLWRVFAQLVGLRAATVGALIFACHPIHAEAVLPVYGQLDLLAAALLAAALLARRAGRHW TGAAALGLALLCKESAIAAPLLMLWLAWTAARRVTAAELPYWPVLGAVLALRIAVLGTVGLSREATVLGTGGIGLWANSV IVTVGHAIRLCVWPTGQTVYYGHLRDSLRGVPVVEALWICAGIALVWLLAGWLPKDSTAVAAGWFAICLLPVANVVPIGV LVAERTLYLPSAGIAALAGLCWVKAAGEGRRWVHGALLVALLVGCAASARTAWRWRTELSLWSSTVADHPRSPKAHAMLG HALLREADKGRADAPALLRQADLSFSEALRLNPGSVDALYGRGLVLSRDGSCAEAMPYLRDAARLRAFDQEIELALRRCG Q
Sequences:
>Translated_481_residues MKALRSPLLWIAILCTVPFLVGTGSEFWGDDRFLIFQRLEPGSGASPLEFFHQDYWMGVEESGLYRPVGLSFLLAERALF GTWEPAYRAVSLLLHFLACVLLWRVFAQLVGLRAATVGALIFACHPIHAEAVLPVYGQLDLLAAALLAAALLARRAGRHW TGAAALGLALLCKESAIAAPLLMLWLAWTAARRVTAAELPYWPVLGAVLALRIAVLGTVGLSREATVLGTGGIGLWANSV IVTVGHAIRLCVWPTGQTVYYGHLRDSLRGVPVVEALWICAGIALVWLLAGWLPKDSTAVAAGWFAICLLPVANVVPIGV LVAERTLYLPSAGIAALAGLCWVKAAGEGRRWVHGALLVALLVGCAASARTAWRWRTELSLWSSTVADHPRSPKAHAMLG HALLREADKGRADAPALLRQADLSFSEALRLNPGSVDALYGRGLVLSRDGSCAEAMPYLRDAARLRAFDQEIELALRRCG Q >Mature_481_residues MKALRSPLLWIAILCTVPFLVGTGSEFWGDDRFLIFQRLEPGSGASPLEFFHQDYWMGVEESGLYRPVGLSFLLAERALF GTWEPAYRAVSLLLHFLACVLLWRVFAQLVGLRAATVGALIFACHPIHAEAVLPVYGQLDLLAAALLAAALLARRAGRHW TGAAALGLALLCKESAIAAPLLMLWLAWTAARRVTAAELPYWPVLGAVLALRIAVLGTVGLSREATVLGTGGIGLWANSV IVTVGHAIRLCVWPTGQTVYYGHLRDSLRGVPVVEALWICAGIALVWLLAGWLPKDSTAVAAGWFAICLLPVANVVPIGV LVAERTLYLPSAGIAALAGLCWVKAAGEGRRWVHGALLVALLVGCAASARTAWRWRTELSLWSSTVADHPRSPKAHAMLG HALLREADKGRADAPALLRQADLSFSEALRLNPGSVDALYGRGLVLSRDGSCAEAMPYLRDAARLRAFDQEIELALRRCG Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI25147174, Length=478, Percent_Identity=25.1046025104602, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24656717, Length=158, Percent_Identity=30.379746835443, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI18110006, Length=158, Percent_Identity=30.379746835443, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51741; Mature: 51741
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALRSPLLWIAILCTVPFLVGTGSEFWGDDRFLIFQRLEPGSGASPLEFFHQDYWMGVE CCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCC ESGLYRPVGLSFLLAERALFGTWEPAYRAVSLLLHFLACVLLWRVFAQLVGLRAATVGAL CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFACHPIHAEAVLPVYGQLDLLAAALLAAALLARRAGRHWTGAAALGLALLCKESAIAAP HHHCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LLMLWLAWTAARRVTAAELPYWPVLGAVLALRIAVLGTVGLSREATVLGTGGIGLWANSV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHH IVTVGHAIRLCVWPTGQTVYYGHLRDSLRGVPVVEALWICAGIALVWLLAGWLPKDSTAV HEEECCEEEEEEECCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AAGWFAICLLPVANVVPIGVLVAERTLYLPSAGIAALAGLCWVKAAGEGRRWVHGALLVA HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH LLVGCAASARTAWRWRTELSLWSSTVADHPRSPKAHAMLGHALLREADKGRADAPALLRQ HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH ADLSFSEALRLNPGSVDALYGRGLVLSRDGSCAEAMPYLRDAARLRAFDQEIELALRRCG HCCCHHHHHCCCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q C >Mature Secondary Structure MKALRSPLLWIAILCTVPFLVGTGSEFWGDDRFLIFQRLEPGSGASPLEFFHQDYWMGVE CCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCC ESGLYRPVGLSFLLAERALFGTWEPAYRAVSLLLHFLACVLLWRVFAQLVGLRAATVGAL CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFACHPIHAEAVLPVYGQLDLLAAALLAAALLARRAGRHWTGAAALGLALLCKESAIAAP HHHCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LLMLWLAWTAARRVTAAELPYWPVLGAVLALRIAVLGTVGLSREATVLGTGGIGLWANSV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHH IVTVGHAIRLCVWPTGQTVYYGHLRDSLRGVPVVEALWICAGIALVWLLAGWLPKDSTAV HEEECCEEEEEEECCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AAGWFAICLLPVANVVPIGVLVAERTLYLPSAGIAALAGLCWVKAAGEGRRWVHGALLVA HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH LLVGCAASARTAWRWRTELSLWSSTVADHPRSPKAHAMLGHALLREADKGRADAPALLRQ HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH ADLSFSEALRLNPGSVDALYGRGLVLSRDGSCAEAMPYLRDAARLRAFDQEIELALRRCG HCCCHHHHHCCCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA