| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB2 [H]
Identifier: 116622741
GI number: 116622741
Start: 4611455
End: 4613884
Strand: Reverse
Name: macB2 [H]
Synonym: Acid_3640
Alternate gene names: 116622741
Gene position: 4613884-4611455 (Counterclockwise)
Preceding gene: 116622745
Following gene: 116622740
Centisome position: 46.3
GC content: 66.09
Gene sequence:
>2430_bases GTGAGCTTCCTTCTTCGTGACGTTCTTTATGGCGTTCGCCTTCTGCGCCGCAGCCCGGCTTTCACTTCGCTGGCGGCAGC GATCATTGCGCTTGGAATCGGAGCTGCCACCGCGATCTTCAGCCTCCTTTATGGAGTGGTGCTGAACGCGCTGCCGTTTC ACGACGCGGACCACCTGATGGCGATCTGGTCCGACTTTTCGAAGGGCGGCGGCAACCGGCGCGCTTATACCGCCCCGGCC GATTATTTCGACTGGAAGGAACGCAGCCGGAGCTTCACCGGGATGACAGCGTACAGGAGCACCAATCGCACCTTCACCGC GCTTGACCAACCGGTGACTCCACTCGCGCAGGAGGTGCCCGCGGATTACTTCGACGTGCTCGGAGTCACGGCGCTGCGCG GACGTACCTTCGTGGCCGGCGAGGACCGGTCGGCTCCCGGCAGCGTCGCCGTGATCAGCTACGCGCTGTGGCAGTCGCTC TTCGATGGCTCCGACGATGTCATTGGAAAGTCCGTGGAGTTGGATGGGCGCGCGGTGCAACTGGTCGGCGTACTTCCGCC GGGATTCCGTATGCCCAATAACTCTGTATTGACGCCGCCCGATCTCTGGATTCCGACGTCTTTCGACGCACAGCGCCTGG AGCGCGTACAGCGCTCGCTGGTCGCCTTCGGGAGATTGAAGCCGGGCGTTTCGCCGGCGCAAGCGGAAGCGGAGCTGGCG GCGATCTCGGAACAGATTGCGCGCGAACACTCGCAGATCAAGGCCGCTCCCCGGGCATGGGCCCTGCCGATTCGGGAAGA CATGATCGGCGAATTTCGAGGCGCTTTCCTGCTGCTGCTGGGCGCGGTCGGGATCATGCTCCTGATTGCCTGCGCGAACG TGGCCAACCTGCTGCTGGCCCGCGCCACGGGCCGGGCTGGCGAAGTGGCGCTGCGAACCGCGCTGGGGGCGTCGCGCGCG GACATTCTAAAACAGATGCTGACGGAGAGCGCGCTGCTGGCGCTGCTCGGGGGCGCGGCGGGAATCCTGGTGGCGCAATT CAGCATCGGACCGCTGCTGGCGCTGATCCCCGCCGCGGCGGGTCTGCCGTTCGCCGAGAACGTGCAGATCAACCTGCCGG TGCTCGCCTTTGCGATGGCGCTTAGCCTGCTCACCGCGGTGTTCTTCGGTCTGGCGCCGGCGCGCCAGGCGCTGAACGCC AACCTGATCGAATCGCTCAAGGAGGGCGGCCGTTCGCGAACCGGCGGACGGGAGGGCGCGCGCTGGCGAAATGCTCTGAT CGTGGTGGAGGTCGGGCTATCGATCGTGCTGTTAACAGGCGCTGGGTTGATGACCCAGACTTTCTGGCGCCTTTCGCACC TCAACCTCGGATTCGACGCCGGCCGGGTGCTTAACGTGCGCAACTCGCTGCGCGGCGAAACGTACGCTACACCCGAAGCG CGGCGCAATCACTTCGCCACGGCCGCGGCCAAGCTGGCGACGATCCCGGGAGTGGAATCGGTCAGCGCGGTAAGCTTCCC GCCCCCCCTCGATCCGATCGCTCCCACGCACTTCACTCTGGCGGGCGATGCCTCCGACTCCGGGCGCGACTATACGGCCC ACCTCCTGGTGATTCTCCCCCGATATTTCGAGACGGTGCGCAATCCGCTGCTGAGCGGCCGGGGAATCACGGAGGCGGAC TCCGCGGATTCGCTACGGGTGGCGGTGGTGACCAAGGAACTTGCGCGCCGGTACTTTGCGGATCGCGACCCGGTGGGCCG GTCAATCCGGCTGAGCGGCGCCTTGGCAGGCGACTGGCGCATTGTGGGAATTGCGGCGGATATTGCCTGCAGCGGCAACC ATCCGGAGCCGCAGCCGATAGTGTACGTTCCGCACGCGCAGGCGCCGGTGGCCACGATGAGCTTCCTGCTGCGCACCCGT GTGGCGCCGGCCACCCTCGGTCCGGTCGCGGAGCGCACTTTGTGGAGCACGGGCCGCCTCATGAACGTGTATCGCATCAT GCCGCTGGAGCAGGTGGTGGAAGCGGGACGGTGGCAGAATCGCTTCACCATGATTTTACTGACGCTGTTTGCCGCCCTCG CTTTGATTCTGGCAGCCGCGGGAATCTACGCCGTGATTTCATTCCTGACCTTGCAGCGAACGCGCGAGATCGGTATCCGC ATGGCACTAGGCGCGCGGCCGGTAGACGTGCTGCGCATGGTGACACGGCAGGGAGTGGCGTTGGCGGCGGCGGGAGTGGC GTTCGGAATGATCGCATCGCTCGCCGCCGGCCGAGTGCTGGCTTCGCGCCTGTACGGAGTCGCAGCAACTGACCCGCTCA CGCTCGCCGGAGGTTCGGTCCTGCTGCTGCTGGTTGCGGCCGCGGCATCCACCGGTCCGGCGATGCGCGCCGCCTCGGTT GCTCCCGCGGACGCATTGCGCCGGGATTAA
Upstream 100 bases:
>100_bases GAGAATGCGGCGTGCGTCGATTGAAAAGGATGACGAGAAGTTCCCAGTTGTAAAGCGCGGCGGCGCGGTACGGCCCATCT CCGTCTCCGTCTATTTTGAA
Downstream 100 bases:
>100_bases CAGCTCGCCGGCGCAACCGTATTTGTGCCGGAGCCTTCCCGCCACGCGATACTCATCGGATATCAAAGTTGGGGCAGTTG CCCTGCTGTCGCCCGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 809; Mature: 808
Protein sequence:
>809_residues MSFLLRDVLYGVRLLRRSPAFTSLAAAIIALGIGAATAIFSLLYGVVLNALPFHDADHLMAIWSDFSKGGGNRRAYTAPA DYFDWKERSRSFTGMTAYRSTNRTFTALDQPVTPLAQEVPADYFDVLGVTALRGRTFVAGEDRSAPGSVAVISYALWQSL FDGSDDVIGKSVELDGRAVQLVGVLPPGFRMPNNSVLTPPDLWIPTSFDAQRLERVQRSLVAFGRLKPGVSPAQAEAELA AISEQIAREHSQIKAAPRAWALPIREDMIGEFRGAFLLLLGAVGIMLLIACANVANLLLARATGRAGEVALRTALGASRA DILKQMLTESALLALLGGAAGILVAQFSIGPLLALIPAAAGLPFAENVQINLPVLAFAMALSLLTAVFFGLAPARQALNA NLIESLKEGGRSRTGGREGARWRNALIVVEVGLSIVLLTGAGLMTQTFWRLSHLNLGFDAGRVLNVRNSLRGETYATPEA RRNHFATAAAKLATIPGVESVSAVSFPPPLDPIAPTHFTLAGDASDSGRDYTAHLLVILPRYFETVRNPLLSGRGITEAD SADSLRVAVVTKELARRYFADRDPVGRSIRLSGALAGDWRIVGIAADIACSGNHPEPQPIVYVPHAQAPVATMSFLLRTR VAPATLGPVAERTLWSTGRLMNVYRIMPLEQVVEAGRWQNRFTMILLTLFAALALILAAAGIYAVISFLTLQRTREIGIR MALGARPVDVLRMVTRQGVALAAAGVAFGMIASLAAGRVLASRLYGVAATDPLTLAGGSVLLLLVAAAASTGPAMRAASV APADALRRD
Sequences:
>Translated_809_residues MSFLLRDVLYGVRLLRRSPAFTSLAAAIIALGIGAATAIFSLLYGVVLNALPFHDADHLMAIWSDFSKGGGNRRAYTAPA DYFDWKERSRSFTGMTAYRSTNRTFTALDQPVTPLAQEVPADYFDVLGVTALRGRTFVAGEDRSAPGSVAVISYALWQSL FDGSDDVIGKSVELDGRAVQLVGVLPPGFRMPNNSVLTPPDLWIPTSFDAQRLERVQRSLVAFGRLKPGVSPAQAEAELA AISEQIAREHSQIKAAPRAWALPIREDMIGEFRGAFLLLLGAVGIMLLIACANVANLLLARATGRAGEVALRTALGASRA DILKQMLTESALLALLGGAAGILVAQFSIGPLLALIPAAAGLPFAENVQINLPVLAFAMALSLLTAVFFGLAPARQALNA NLIESLKEGGRSRTGGREGARWRNALIVVEVGLSIVLLTGAGLMTQTFWRLSHLNLGFDAGRVLNVRNSLRGETYATPEA RRNHFATAAAKLATIPGVESVSAVSFPPPLDPIAPTHFTLAGDASDSGRDYTAHLLVILPRYFETVRNPLLSGRGITEAD SADSLRVAVVTKELARRYFADRDPVGRSIRLSGALAGDWRIVGIAADIACSGNHPEPQPIVYVPHAQAPVATMSFLLRTR VAPATLGPVAERTLWSTGRLMNVYRIMPLEQVVEAGRWQNRFTMILLTLFAALALILAAAGIYAVISFLTLQRTREIGIR MALGARPVDVLRMVTRQGVALAAAGVAFGMIASLAAGRVLASRLYGVAATDPLTLAGGSVLLLLVAAAASTGPAMRAASV APADALRRD >Mature_808_residues SFLLRDVLYGVRLLRRSPAFTSLAAAIIALGIGAATAIFSLLYGVVLNALPFHDADHLMAIWSDFSKGGGNRRAYTAPAD YFDWKERSRSFTGMTAYRSTNRTFTALDQPVTPLAQEVPADYFDVLGVTALRGRTFVAGEDRSAPGSVAVISYALWQSLF DGSDDVIGKSVELDGRAVQLVGVLPPGFRMPNNSVLTPPDLWIPTSFDAQRLERVQRSLVAFGRLKPGVSPAQAEAELAA ISEQIAREHSQIKAAPRAWALPIREDMIGEFRGAFLLLLGAVGIMLLIACANVANLLLARATGRAGEVALRTALGASRAD ILKQMLTESALLALLGGAAGILVAQFSIGPLLALIPAAAGLPFAENVQINLPVLAFAMALSLLTAVFFGLAPARQALNAN LIESLKEGGRSRTGGREGARWRNALIVVEVGLSIVLLTGAGLMTQTFWRLSHLNLGFDAGRVLNVRNSLRGETYATPEAR RNHFATAAAKLATIPGVESVSAVSFPPPLDPIAPTHFTLAGDASDSGRDYTAHLLVILPRYFETVRNPLLSGRGITEADS ADSLRVAVVTKELARRYFADRDPVGRSIRLSGALAGDWRIVGIAADIACSGNHPEPQPIVYVPHAQAPVATMSFLLRTRV APATLGPVAERTLWSTGRLMNVYRIMPLEQVVEAGRWQNRFTMILLTLFAALALILAAAGIYAVISFLTLQRTREIGIRM ALGARPVDVLRMVTRQGVALAAAGVAFGMIASLAAGRVLASRLYGVAATDPLTLAGGSVLLLLVAAAASTGPAMRAASVA PADALRRD
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=296, Percent_Identity=27.3648648648649, Blast_Score=79, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 85963; Mature: 85832
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLLRDVLYGVRLLRRSPAFTSLAAAIIALGIGAATAIFSLLYGVVLNALPFHDADHLM CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AIWSDFSKGGGNRRAYTAPADYFDWKERSRSFTGMTAYRSTNRTFTALDQPVTPLAQEVP HHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCHHHHHCC ADYFDVLGVTALRGRTFVAGEDRSAPGSVAVISYALWQSLFDGSDDVIGKSVELDGRAVQ HHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCEECCCCEEE LVGVLPPGFRMPNNSVLTPPDLWIPTSFDAQRLERVQRSLVAFGRLKPGVSPAQAEAELA EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AISEQIAREHSQIKAAPRAWALPIREDMIGEFRGAFLLLLGAVGIMLLIACANVANLLLA HHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RATGRAGEVALRTALGASRADILKQMLTESALLALLGGAAGILVAQFSIGPLLALIPAAA HCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC GLPFAENVQINLPVLAFAMALSLLTAVFFGLAPARQALNANLIESLKEGGRSRTGGREGA CCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCC RWRNALIVVEVGLSIVLLTGAGLMTQTFWRLSHLNLGFDAGRVLNVRNSLRGETYATPEA HHHCEEEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCCCCCCCCHH RRNHFATAAAKLATIPGVESVSAVSFPPPLDPIAPTHFTLAGDASDSGRDYTAHLLVILP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH RYFETVRNPLLSGRGITEADSADSLRVAVVTKELARRYFADRDPVGRSIRLSGALAGDWR HHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEECCEECCCEE IVGIAADIACSGNHPEPQPIVYVPHAQAPVATMSFLLRTRVAPATLGPVAERTLWSTGRL EEEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHH MNVYRIMPLEQVVEAGRWQNRFTMILLTLFAALALILAAAGIYAVISFLTLQRTREIGIR HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE MALGARPVDVLRMVTRQGVALAAAGVAFGMIASLAAGRVLASRLYGVAATDPLTLAGGSV EECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHH LLLLVAAAASTGPAMRAASVAPADALRRD HHHHHHHHCCCCCHHHHHCCCCHHHHCCC >Mature Secondary Structure SFLLRDVLYGVRLLRRSPAFTSLAAAIIALGIGAATAIFSLLYGVVLNALPFHDADHLM HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AIWSDFSKGGGNRRAYTAPADYFDWKERSRSFTGMTAYRSTNRTFTALDQPVTPLAQEVP HHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCHHHHHCC ADYFDVLGVTALRGRTFVAGEDRSAPGSVAVISYALWQSLFDGSDDVIGKSVELDGRAVQ HHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCEECCCCEEE LVGVLPPGFRMPNNSVLTPPDLWIPTSFDAQRLERVQRSLVAFGRLKPGVSPAQAEAELA EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AISEQIAREHSQIKAAPRAWALPIREDMIGEFRGAFLLLLGAVGIMLLIACANVANLLLA HHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RATGRAGEVALRTALGASRADILKQMLTESALLALLGGAAGILVAQFSIGPLLALIPAAA HCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC GLPFAENVQINLPVLAFAMALSLLTAVFFGLAPARQALNANLIESLKEGGRSRTGGREGA CCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCC RWRNALIVVEVGLSIVLLTGAGLMTQTFWRLSHLNLGFDAGRVLNVRNSLRGETYATPEA HHHCEEEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCCCCCCCCHH RRNHFATAAAKLATIPGVESVSAVSFPPPLDPIAPTHFTLAGDASDSGRDYTAHLLVILP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH RYFETVRNPLLSGRGITEADSADSLRVAVVTKELARRYFADRDPVGRSIRLSGALAGDWR HHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEECCEECCCEE IVGIAADIACSGNHPEPQPIVYVPHAQAPVATMSFLLRTRVAPATLGPVAERTLWSTGRL EEEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHH MNVYRIMPLEQVVEAGRWQNRFTMILLTLFAALALILAAAGIYAVISFLTLQRTREIGIR HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE MALGARPVDVLRMVTRQGVALAAAGVAFGMIASLAAGRVLASRLYGVAATDPLTLAGGSV EECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHH LLLLVAAAASTGPAMRAASVAPADALRRD HHHHHHHHCCCCCHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA