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The map label for this gene is 116622728

Identifier: 116622728

GI number: 116622728

Start: 4591848

End: 4593980

Strand: Direct

Name: 116622728

Synonym: Acid_3627

Alternate gene names: NA

Gene position: 4591848-4593980 (Clockwise)

Preceding gene: 116622725

Following gene: 116622729

Centisome position: 46.08

GC content: 63.71

Gene sequence:

>2133_bases
ATGATTGAGTCGACGGCCCGTGCAGAACGTTACGACCTGCAGACTTCCCTCTCCCCCTTCTACCTCTGGGAGGTTCCGCA
GAAACCGGTGTCGGTGCGCATTCCTTTCAGCCTGATCGACCGGCTGGAGCGGGATGCAGTAGAGAGCTTCCGTTCGTTAA
CCTCTAAAGGCTCGGAGATCGGTGGTCTCCTGGTTGGCGGTGTGACCCCCGGAAGTCCGCTGGTGGTGTCGATCGCCGAT
TATGAATTGATTCCGTGCGACTACAGCCGCGGCCCCTTGTATCGCCTGAGCGATGCGGATATGGGTCGATTCGAGCGCGC
CATTGAACAGCGCGTGGGTTCGGGAGCTGCGATCGCCGGATTCTTCCGCAGCCAGACGCGGAAAGGACTTTCTCTGGACG
GCGACGACCTGGCGTTCTTCGAGGCTCGCTTCCGCGATCCTCACCAGATCGCGCTGCTGGTTCGTCCCTTCGCCACCAAA
GCGAGCACGGGCGGCATCTTCATTTGGGAAAACGGCAAGGTAAACGGCGATACCAGTTATTTGGAATTTCCGTTCCGCTC
GAGTGAACTCGGACCCGGGAGCACTGCCCCGCCCGAACCGCCGGAGAGCAAGGCCGGCGCCACGCAGGGTCCCAAGGCTC
CCGCGCGTGGACAGATTGTCCCGATCGCCTCGCGCCGCGAGATTTCGATTCCGCAGCCTTCGGCCCCGGAGCCGGCTGCG
GTGGCAGCAGCTCCGGCACCCGTCCCGGCTCCTCCGGCGCCCGCGCCTGCAGCCGCCGCTGCCGCGCCCGCGGTGGAAGC
CAAGCCGACGGTGACCGAAGACAAATCGGCGAAGCCCGCGAAGGCCGACAAGAACGAGAAGGCCGACAAATCCGATAGAT
CGGACAAGACCGACAAGGCCGACAAATTCGAGAAGTCGGGTAAATCCGCCAAGACCGAGAAGATCGAAAAGAACGACAAG
GTCGAGAAGAGCGACAAGGTCGAGAAGGCTGAAAAGATCGAAGCGCCAGCTAAGCCGGAAAAGCAGGAGAAAAAGGAAGC
CGCGGCCGCCGCCATTTCCCTGACTTCGACTCCCGCGCCCGAGAAGGGCGGCAAGCCGGTGAAACTGCTGGTGGCCGCCG
CCGCCGCGATCGCCCTATTCGTCGGACTTTTCGTTTACCCCGGTTTCCTTCGCAACCACGCCGCCAAGCCCGCCGCGGTC
GCGGGCAACCCGCAGGATTCCTCCCCGCTGCAACTTCGGGTGGAACGCACCGCCGGCGAACTCCTGATCACGTGGAATCG
CGACGCCGAGGTCATCAAGAATGCCAGCAAGGCCGTGCTCTCCATCTCCGACGGCGAACAGCATGAGAACGTGGAAATGG
ATCTGGCGCAGCTCCGCAACGGCAGCATCGTCTATTCACCTTCCAGCATCGACACCAGCTTCAAGATGGAAGTGATCGAC
AAGAGCAACGCCAAGACGGCGAGCGAATCGGTCCGTGTGCTGCGCACCCGCCCGTCGCCGCTCGAAACACAACCGGCACC
CGCGCCCGCAGCGGCCGCGCCGACGAAGCCCGCGGCCACGGAGACCAAGACCCCGGCGGCCTCCGCTGCTGCCGTGGAAG
AATCTCCGGCAGAGGCGCCCACCAAGCTGGCGAGCCCGTCCAAGCCTTTCCAGACCGAATCGCTTTCGCAGCGTCTCCGT
CCGGCAGTCAATACGGATATGCCTGAGGCTCCGAGCGTTGGTGGCTCCGGCAACTCCTTCGCCTCGGCCCTGCCCGGGAT
GGGTTCCAGCGCGGTCGCGCCGGCACCCGTAGCGCCCGCCTCGCCGAACACTCCGACTCCCGCGGCAGCTACCGGCAACA
CGACTGCGGCCAAGGCAGGCGGCCAGATTCAGCAGGCCGTGCTGGTTTATCGCAAGGAAGCCGAATATCCCAAGATCGCC
AAGCAGACCGGCGCCAAGGGAGTGGTTACGCTCAACGCGACCATCACCAAAGACGGAACCGTCAAGAACGTAAAGGTGGT
CTCCGGCCATCCGATGCTGGTCAATGCGGCTGCCGAAGCCGTCCGCCAGTGGCGCTACAAGCCCACGCTGCTGAATGGCC
AGGCAGTCGAGACCGACACGCAGATCCTGGTGAACTTCGTCGGAGAGAAGTAG

Upstream 100 bases:

>100_bases
AAAACGTAAAATACCTTAAATTAAGTGCGCAAAATCGAGAAATTCTGAGTAAAATCAACCTGAGCTGGTCCTGGTAGCAA
CGGACCGGCGGAGGAATTCG

Downstream 100 bases:

>100_bases
AGGACAATCTCTTCTGGAAAACCCCCGGAGCGCGGCGGCCTGGTGCCGCCGCGCTCGAACTACGTATAAGCGCTACCGAT
AAAGGGCGATTCTCGAGGGA

Product: TonB family protein

Products: NA

Alternate protein names: NB-Like Protein; Mov34/MPN/PAD-1 Family Protein; NB Domain Protein; Peptidase; GAF Sensor Protein

Number of amino acids: Translated: 710; Mature: 710

Protein sequence:

>710_residues
MIESTARAERYDLQTSLSPFYLWEVPQKPVSVRIPFSLIDRLERDAVESFRSLTSKGSEIGGLLVGGVTPGSPLVVSIAD
YELIPCDYSRGPLYRLSDADMGRFERAIEQRVGSGAAIAGFFRSQTRKGLSLDGDDLAFFEARFRDPHQIALLVRPFATK
ASTGGIFIWENGKVNGDTSYLEFPFRSSELGPGSTAPPEPPESKAGATQGPKAPARGQIVPIASRREISIPQPSAPEPAA
VAAAPAPVPAPPAPAPAAAAAAPAVEAKPTVTEDKSAKPAKADKNEKADKSDRSDKTDKADKFEKSGKSAKTEKIEKNDK
VEKSDKVEKAEKIEAPAKPEKQEKKEAAAAAISLTSTPAPEKGGKPVKLLVAAAAAIALFVGLFVYPGFLRNHAAKPAAV
AGNPQDSSPLQLRVERTAGELLITWNRDAEVIKNASKAVLSISDGEQHENVEMDLAQLRNGSIVYSPSSIDTSFKMEVID
KSNAKTASESVRVLRTRPSPLETQPAPAPAAAAPTKPAATETKTPAASAAAVEESPAEAPTKLASPSKPFQTESLSQRLR
PAVNTDMPEAPSVGGSGNSFASALPGMGSSAVAPAPVAPASPNTPTPAAATGNTTAAKAGGQIQQAVLVYRKEAEYPKIA
KQTGAKGVVTLNATITKDGTVKNVKVVSGHPMLVNAAAEAVRQWRYKPTLLNGQAVETDTQILVNFVGEK

Sequences:

>Translated_710_residues
MIESTARAERYDLQTSLSPFYLWEVPQKPVSVRIPFSLIDRLERDAVESFRSLTSKGSEIGGLLVGGVTPGSPLVVSIAD
YELIPCDYSRGPLYRLSDADMGRFERAIEQRVGSGAAIAGFFRSQTRKGLSLDGDDLAFFEARFRDPHQIALLVRPFATK
ASTGGIFIWENGKVNGDTSYLEFPFRSSELGPGSTAPPEPPESKAGATQGPKAPARGQIVPIASRREISIPQPSAPEPAA
VAAAPAPVPAPPAPAPAAAAAAPAVEAKPTVTEDKSAKPAKADKNEKADKSDRSDKTDKADKFEKSGKSAKTEKIEKNDK
VEKSDKVEKAEKIEAPAKPEKQEKKEAAAAAISLTSTPAPEKGGKPVKLLVAAAAAIALFVGLFVYPGFLRNHAAKPAAV
AGNPQDSSPLQLRVERTAGELLITWNRDAEVIKNASKAVLSISDGEQHENVEMDLAQLRNGSIVYSPSSIDTSFKMEVID
KSNAKTASESVRVLRTRPSPLETQPAPAPAAAAPTKPAATETKTPAASAAAVEESPAEAPTKLASPSKPFQTESLSQRLR
PAVNTDMPEAPSVGGSGNSFASALPGMGSSAVAPAPVAPASPNTPTPAAATGNTTAAKAGGQIQQAVLVYRKEAEYPKIA
KQTGAKGVVTLNATITKDGTVKNVKVVSGHPMLVNAAAEAVRQWRYKPTLLNGQAVETDTQILVNFVGEK
>Mature_710_residues
MIESTARAERYDLQTSLSPFYLWEVPQKPVSVRIPFSLIDRLERDAVESFRSLTSKGSEIGGLLVGGVTPGSPLVVSIAD
YELIPCDYSRGPLYRLSDADMGRFERAIEQRVGSGAAIAGFFRSQTRKGLSLDGDDLAFFEARFRDPHQIALLVRPFATK
ASTGGIFIWENGKVNGDTSYLEFPFRSSELGPGSTAPPEPPESKAGATQGPKAPARGQIVPIASRREISIPQPSAPEPAA
VAAAPAPVPAPPAPAPAAAAAAPAVEAKPTVTEDKSAKPAKADKNEKADKSDRSDKTDKADKFEKSGKSAKTEKIEKNDK
VEKSDKVEKAEKIEAPAKPEKQEKKEAAAAAISLTSTPAPEKGGKPVKLLVAAAAAIALFVGLFVYPGFLRNHAAKPAAV
AGNPQDSSPLQLRVERTAGELLITWNRDAEVIKNASKAVLSISDGEQHENVEMDLAQLRNGSIVYSPSSIDTSFKMEVID
KSNAKTASESVRVLRTRPSPLETQPAPAPAAAAPTKPAATETKTPAASAAAVEESPAEAPTKLASPSKPFQTESLSQRLR
PAVNTDMPEAPSVGGSGNSFASALPGMGSSAVAPAPVAPASPNTPTPAAATGNTTAAKAGGQIQQAVLVYRKEAEYPKIA
KQTGAKGVVTLNATITKDGTVKNVKVVSGHPMLVNAAAEAVRQWRYKPTLLNGQAVETDTQILVNFVGEK

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74526; Mature: 74526

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIESTARAERYDLQTSLSPFYLWEVPQKPVSVRIPFSLIDRLERDAVESFRSLTSKGSEI
CCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC
GGLLVGGVTPGSPLVVSIADYELIPCDYSRGPLYRLSDADMGRFERAIEQRVGSGAAIAG
CCEEEECCCCCCCEEEEEECCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHH
FFRSQTRKGLSLDGDDLAFFEARFRDPHQIALLVRPFATKASTGGIFIWENGKVNGDTSY
HHHHHHCCCCCCCCCCEEEHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCEECCCCCE
LEFPFRSSELGPGSTAPPEPPESKAGATQGPKAPARGQIVPIASRREISIPQPSAPEPAA
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCE
VAAAPAPVPAPPAPAPAAAAAAPAVEAKPTVTEDKSAKPAKADKNEKADKSDRSDKTDKA
EECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
DKFEKSGKSAKTEKIEKNDKVEKSDKVEKAEKIEAPAKPEKQEKKEAAAAAISLTSTPAP
HHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCCC
EKGGKPVKLLVAAAAAIALFVGLFVYPGFLRNHAAKPAAVAGNPQDSSPLQLRVERTAGE
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCCCCCCCEEEEEEECCCC
LLITWNRDAEVIKNASKAVLSISDGEQHENVEMDLAQLRNGSIVYSPSSIDTSFKMEVID
EEEEECCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEEEEEE
KSNAKTASESVRVLRTRPSPLETQPAPAPAAAAPTKPAATETKTPAASAAAVEESPAEAP
CCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
TKLASPSKPFQTESLSQRLRPAVNTDMPEAPSVGGSGNSFASALPGMGSSAVAPAPVAPA
HHHCCCCCCCCHHHHHHHHCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
SPNTPTPAAATGNTTAAKAGGQIQQAVLVYRKEAEYPKIAKQTGAKGVVTLNATITKDGT
CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEEEECCCC
VKNVKVVSGHPMLVNAAAEAVRQWRYKPTLLNGQAVETDTQILVNFVGEK
EEEEEEECCCCEEEHHHHHHHHHHCCCCEEECCCEECCHHHHHHHHHCCC
>Mature Secondary Structure
MIESTARAERYDLQTSLSPFYLWEVPQKPVSVRIPFSLIDRLERDAVESFRSLTSKGSEI
CCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC
GGLLVGGVTPGSPLVVSIADYELIPCDYSRGPLYRLSDADMGRFERAIEQRVGSGAAIAG
CCEEEECCCCCCCEEEEEECCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHH
FFRSQTRKGLSLDGDDLAFFEARFRDPHQIALLVRPFATKASTGGIFIWENGKVNGDTSY
HHHHHHCCCCCCCCCCEEEHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCEECCCCCE
LEFPFRSSELGPGSTAPPEPPESKAGATQGPKAPARGQIVPIASRREISIPQPSAPEPAA
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCE
VAAAPAPVPAPPAPAPAAAAAAPAVEAKPTVTEDKSAKPAKADKNEKADKSDRSDKTDKA
EECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
DKFEKSGKSAKTEKIEKNDKVEKSDKVEKAEKIEAPAKPEKQEKKEAAAAAISLTSTPAP
HHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCCC
EKGGKPVKLLVAAAAAIALFVGLFVYPGFLRNHAAKPAAVAGNPQDSSPLQLRVERTAGE
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCCCCCCCEEEEEEECCCC
LLITWNRDAEVIKNASKAVLSISDGEQHENVEMDLAQLRNGSIVYSPSSIDTSFKMEVID
EEEEECCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEEEEEE
KSNAKTASESVRVLRTRPSPLETQPAPAPAAAAPTKPAATETKTPAASAAAVEESPAEAP
CCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
TKLASPSKPFQTESLSQRLRPAVNTDMPEAPSVGGSGNSFASALPGMGSSAVAPAPVAPA
HHHCCCCCCCCHHHHHHHHCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
SPNTPTPAAATGNTTAAKAGGQIQQAVLVYRKEAEYPKIAKQTGAKGVVTLNATITKDGT
CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEEEECCCC
VKNVKVVSGHPMLVNAAAEAVRQWRYKPTLLNGQAVETDTQILVNFVGEK
EEEEEEECCCCEEEHHHHHHHHHHCCCCEEECCCEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA