| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622656
Identifier: 116622656
GI number: 116622656
Start: 4501517
End: 4502470
Strand: Reverse
Name: 116622656
Synonym: Acid_3555
Alternate gene names: NA
Gene position: 4502470-4501517 (Counterclockwise)
Preceding gene: 116622657
Following gene: 116622655
Centisome position: 45.18
GC content: 65.93
Gene sequence:
>954_bases ATGAGCCGATATGAACTGTTCGACCGATCCCGCCTGCTGGTAAAGCCCCTGGCGGAGCGCGCCAACGATCTGCAACTGGA TCGCTGGCTGGCGCTGACCGACGCAACGCCCCCGTTCGCCCATCCCGACCTGGCGACCGTCGCCGCACGCCTCACCGCCG CGAAAGCGAAGGGCGCCGCGCGGATTCTCATGATGGGCGCCCACGTACTCCGCGCCGGCGTCAATCGCCACCTGATCGAC CTGGTGCAGCGCGGCTTTATCGACCACATCGCGATGAATGGCGCGGGCGCGATCCACGATTACGAGCTCGCGCGCTTCGG AGCCACTACGGAAAGTGTGGACCGCTACATCCGCAGCGGCGAGTTCGGACTCTGGCGCGAGACCGGCGAGCTCAACGACT GGATCCGCGAGGCCGCCGCGAAGGAACTCGGCCTCGGCGAGAACGTAGGCCGGCGGATTGCGGAGAGCGCCTACCCGCAT CGCGACCTCAGCGTGTTCGCGGCGGGATGGCGCGCCGGAGTACCGATCACGGTGCACGCCGGCATCGGCTACGACATCAT TCACGAGCACCCCAACTGCGATGGCGCCGCGCTCGGCGACGCCAGCTATCGCGATTTTCTGATCTTCGCGCGCACCGTGG AGCGGCTGGAAGGCGGCGTCCTGCTCAACTTCGGCTCGGCCATCATGGGCCCCGAGGTCTATCTGAAGGCGCTCGCGATG TCGCGCAACGTTGCGCTGCAGGAAGGCCGCACGATCCGCAATTTCGCCACCGCGGTCTTCGACATGATTCCGATTCAGGG CGATCATCGCAAGGAGCTGCCCAAGACCGACCCTGGCTATTACTTCCGCCCCCACAAGACGATTCTGGTGCGCACAATCG CCGACGGCGGCGAGAGCTTTTACTTTTGCGGCGAGCATCGCGCCACCGTGCCCGCACTCTGGCGCCTGCTATGA
Upstream 100 bases:
>100_bases AACGAATGGAAGCGACAGAACCTGACCGCGGCCGGCGCCGACTATATCATTCCCAACTATCTCTGCCGGCAGGCACTGCT GCCGACGCTGTTTGCCAACC
Downstream 100 bases:
>100_bases CGGCCGCGCAGATCCTCGCCGAATTCCGACGCCTGCGCGTGCTGGTGGTCGGCGACGTCTGCCTGGACCGCTGGTGCCGC TACGACCCGGCGCTCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSRYELFDRSRLLVKPLAERANDLQLDRWLALTDATPPFAHPDLATVAARLTAAKAKGAARILMMGAHVLRAGVNRHLID LVQRGFIDHIAMNGAGAIHDYELARFGATTESVDRYIRSGEFGLWRETGELNDWIREAAAKELGLGENVGRRIAESAYPH RDLSVFAAGWRAGVPITVHAGIGYDIIHEHPNCDGAALGDASYRDFLIFARTVERLEGGVLLNFGSAIMGPEVYLKALAM SRNVALQEGRTIRNFATAVFDMIPIQGDHRKELPKTDPGYYFRPHKTILVRTIADGGESFYFCGEHRATVPALWRLL
Sequences:
>Translated_317_residues MSRYELFDRSRLLVKPLAERANDLQLDRWLALTDATPPFAHPDLATVAARLTAAKAKGAARILMMGAHVLRAGVNRHLID LVQRGFIDHIAMNGAGAIHDYELARFGATTESVDRYIRSGEFGLWRETGELNDWIREAAAKELGLGENVGRRIAESAYPH RDLSVFAAGWRAGVPITVHAGIGYDIIHEHPNCDGAALGDASYRDFLIFARTVERLEGGVLLNFGSAIMGPEVYLKALAM SRNVALQEGRTIRNFATAVFDMIPIQGDHRKELPKTDPGYYFRPHKTILVRTIADGGESFYFCGEHRATVPALWRLL >Mature_316_residues SRYELFDRSRLLVKPLAERANDLQLDRWLALTDATPPFAHPDLATVAARLTAAKAKGAARILMMGAHVLRAGVNRHLIDL VQRGFIDHIAMNGAGAIHDYELARFGATTESVDRYIRSGEFGLWRETGELNDWIREAAAKELGLGENVGRRIAESAYPHR DLSVFAAGWRAGVPITVHAGIGYDIIHEHPNCDGAALGDASYRDFLIFARTVERLEGGVLLNFGSAIMGPEVYLKALAMS RNVALQEGRTIRNFATAVFDMIPIQGDHRKELPKTDPGYYFRPHKTILVRTIADGGESFYFCGEHRATVPALWRLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35162; Mature: 35030
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYELFDRSRLLVKPLAERANDLQLDRWLALTDATPPFAHPDLATVAARLTAAKAKGAA CCCCHHHHCHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHH RILMMGAHVLRAGVNRHLIDLVQRGFIDHIAMNGAGAIHDYELARFGATTESVDRYIRSG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHCC EFGLWRETGELNDWIREAAAKELGLGENVGRRIAESAYPHRDLSVFAAGWRAGVPITVHA CCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHEEECCCCCCCCEEEEC GIGYDIIHEHPNCDGAALGDASYRDFLIFARTVERLEGGVLLNFGSAIMGPEVYLKALAM CCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHCHHHHHHHHHH SRNVALQEGRTIRNFATAVFDMIPIQGDHRKELPKTDPGYYFRPHKTILVRTIADGGESF HCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEECCCCEEEEEEECCCCCEE YFCGEHRATVPALWRLL EEECCCCCHHHHHHHCC >Mature Secondary Structure SRYELFDRSRLLVKPLAERANDLQLDRWLALTDATPPFAHPDLATVAARLTAAKAKGAA CCCHHHHCHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHH RILMMGAHVLRAGVNRHLIDLVQRGFIDHIAMNGAGAIHDYELARFGATTESVDRYIRSG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHCC EFGLWRETGELNDWIREAAAKELGLGENVGRRIAESAYPHRDLSVFAAGWRAGVPITVHA CCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHEEECCCCCCCCEEEEC GIGYDIIHEHPNCDGAALGDASYRDFLIFARTVERLEGGVLLNFGSAIMGPEVYLKALAM CCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHCHHHHHHHHHH SRNVALQEGRTIRNFATAVFDMIPIQGDHRKELPKTDPGYYFRPHKTILVRTIADGGESF HCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEECCCCEEEEEEECCCCCEE YFCGEHRATVPALWRLL EEECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA