| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622603
Identifier: 116622603
GI number: 116622603
Start: 4430651
End: 4433554
Strand: Direct
Name: 116622603
Synonym: Acid_3501
Alternate gene names: NA
Gene position: 4430651-4433554 (Clockwise)
Preceding gene: 116622602
Following gene: 116622604
Centisome position: 44.46
GC content: 59.09
Gene sequence:
>2904_bases ATGATACGAGTCTCGGTGCTCTCGGCGCTCATCGCCGGATGGGCGTTATCAGCGGCGACCCCGCCGCAGACATTTCACCG TCCTTTGACATTTGAACCGAACCACGGGCAAGCCCCGGCGGAGTTCAAATGGCTCGGGCAAAGCTCCGGCTGCCAAATCC TGCTCGACGCCGAAGGCGCTACGATCGTAATTCCGGATAAATCGAAGCTGCAACCGGCCTCCCCGCAGCTGCCGGGAACA CCACACCCTCTCCACATTCCTTACAGCGCCGTCCGCATGAAGCTTGCGGGGAGCCGCCCCTGGAATGAAATATCCGGCGC CGAGCCCACGGGAGGCGTAAGCAACTATGTCAACAGCCGCGATCCCAAGCGCTCCGTCACTCGAATCCCGCAGTATGGCC GGGTGAAAGTTGCGAATGTGTACAAAGGAATCGACCTCATCTTTTATAGCAACGACGGCGATCTGGAATATGACTTCGCG GTTGCACCGGGCGCCAATCCCGAACAAATCCAGGTGGCCTTCGAGGGCACCAGGGGAATGCGCGTCGATCCCAAGTCAGG CGATCTGCTGGTGAAGCTCCCGGACGGTTCAGAACTCCGGCAGCTCAAGCCCAAGGTGTATCAGCAGGCTGGAAATAAGC GCGTAGAGATTGCCGGGGTCTATAGGCTGCTCGAGCAGGGACGCGCCGCGTTCACGTTAGCCGGCTATGACCGGAGCCAG GCGCTGGTCATCGATCCGCGACTCACCATCGCGCGCTCGATTGGCGGCGACAAAGACGATCAGCCCAACGCCATCGCCGT GGATGACCTCAGCAATAGTTTCATCATCGGATCCACGTTTTCCGTGAATTTCCCCGTAACCAACAACTCACAGTTTTTGA AACCCAAGAGTTGTGGCAGCTTTCCCTTTGATCCTGGCTTTTGCGGTGCGGCTGTAACCTCGAATATATTTATCGCCGAG GTGGCTTCAGACGGCAGCATTCCGTTCGTCACCTACGACGGGGTTGGGCTCGGGAACGGAATCGCGGTGGATTCTTCGGG CATCTATGTCACCGGAGAGGCCTTTCCGCCCGACTCGGACATCGACAACTTCCCCTTCGGCGACAATGCCGGCGACCTCT TCGTTCAGAAGCTCAGCGTAAACGGCTCACCCGGCTATTTCACGTTTGCCGATGAACCGGGCGAGGACTTCGGAAATGCG ATTGCCCTGGATGACCTGCACAATGCGTGGGCGGTAGGAGCAAGTTTCGCCGCCGGCGGAGAAGACGTGCTGGTCATCGA AGTCGCTCCAAGTGGAGAGAGAATCTATAAGCGCAGGTTCAGCAGCACTGGCAAGGATGTCGCTTTTGGTGTTGCTGTCG CCGCGCGTCAGCCCTGGATTACGGGACAGACATGCGGGAGCGGCTTCCCCACTACGGACGGAATCGTGCACAATCCCGAT CACTGTGCCGTGTTCGTGCTTCACCAGGATGAAGCGGGCAATAATCTCATGGGCATGGTATTCGGTGGCCAGGGTGCCGA CGACGGGGGAACCGCGATTGTAACCAACGGCAGCAACTCGGCCATCGTAACGGGTTTCACCAACAATTCCTTTAACTTCC CGCGAACTACCTTCGGTTTAGATGCTGCTTTCGTCTTCTCCTTACCCATGGGCTTTGTTACCGAGGTGACCGCCATCGGT GCTGCCCCCGGTTCGATCGTCCACTCCTCGACGATTACCGCTACCAACGGATTCGTGCGTCCTACCGGGATCGCGACAGA CAACAAGACCGACGGAATCTATATCTCCGGAGTCACGAATTCTCCGTCGTTTCCACGTGCCGTTACTCCCGGACCAAACA GCGCAAACATGGGCTTCGTCATGAAGGTCCCCCACGATCTCTCTCAGATTCTTTACAGCGTGTTGCTGGGCCAGACACTG ACCGCGGTTGCCGTACGGCAGTCCGCGCCCGTGTTCCCGGAGATCTATGTGACCGGTTTTGAGCACGAAGGTAACTCGCT GGAAGCCTTTATGGTGAAGATGATCGAAGATACTCCCACGAGCTTCGCGAGCAGCACGGCGGCGCAGGTGAACACGAGTT CCTTCACGGTAAGCTGGGGCGGTTCCGGTCCCGTTTCCGGCGCGTTCACCTTCGATGTGTTTGTGTCGGACAACGGCGGG CCCTTCACGAAATTCCAAACGGCAACCACGGCTCCGTCGGCCACGTTCACCGGTTTGCCCGGACATACTTACGGCTTTTT CAGCATTGCCACCGACGCCGCGGGAAACAAGGAACCGATGAAGACCAAGGCCGATTTCGTGGTAACCATCCTGGATGTCA CGCCCCCGCTGATCACACCCCAGGTCACCGGCACACTGGGCAATAACGGCTGGTATCGAAGCGCTGTCACCGTCACCTGG AACGTCTCCGACCCCGACTCCGGAATTGTGTCCTCCACAGGATGCGCGCCGACAAACCTCACGTCGGAGACAGCGGGCGT CACCCTTACCTGCTCCGCAACCAACGGCGCCGGACTGGCCGCGTCCGTTCCGATCACAATCAAAATCGACAAGACGCTAC CGGCGATCTCCGGAATGCCTTCCACCGGTTGTTCCCTTTGGCCTCCGAACCACAAGCTGGTGCAGGTTGCCACGGTGACC GCGGCCGATGCGCTCGCGGGACTGGCCCCCGGCTCCTTCCAGGTGAGCGTCACCAGCAATGAGCCGTCATCCGATCCCGG CGATCCCGAGATCGTGATCACACCCAATGGCTCGGGCGGATTCACCGTGCAACTTCAGGCGGATCGTTTGGGAAGCGGTA ACGGCAGGATCTACACGGTTAAGGCGAGCGTTATGGACAAGGCTGGCAATCCGGCTGCGGCGACCGCAACCTGCACGGTC CCTCACGATAAGGGGGAGAAATGA
Upstream 100 bases:
>100_bases CCGCATTCGATTTGAGGGCGGAGTACGCGCGCCCGATTGAGTCGCGGAAGAACTTGGCAGCCAACCAAAAACCGCTGGCT TCCACACAGGAGAGTCCACA
Downstream 100 bases:
>100_bases ACCGCTGCAGTAGCCGGAGCACAGGCCGGCTTCCCGTACCGTAAGTCGGGCTCGTCACCTGGACAGGCCTCCCGGCCAGG ACTCCCTGGCCCCGCGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 967; Mature: 967
Protein sequence:
>967_residues MIRVSVLSALIAGWALSAATPPQTFHRPLTFEPNHGQAPAEFKWLGQSSGCQILLDAEGATIVIPDKSKLQPASPQLPGT PHPLHIPYSAVRMKLAGSRPWNEISGAEPTGGVSNYVNSRDPKRSVTRIPQYGRVKVANVYKGIDLIFYSNDGDLEYDFA VAPGANPEQIQVAFEGTRGMRVDPKSGDLLVKLPDGSELRQLKPKVYQQAGNKRVEIAGVYRLLEQGRAAFTLAGYDRSQ ALVIDPRLTIARSIGGDKDDQPNAIAVDDLSNSFIIGSTFSVNFPVTNNSQFLKPKSCGSFPFDPGFCGAAVTSNIFIAE VASDGSIPFVTYDGVGLGNGIAVDSSGIYVTGEAFPPDSDIDNFPFGDNAGDLFVQKLSVNGSPGYFTFADEPGEDFGNA IALDDLHNAWAVGASFAAGGEDVLVIEVAPSGERIYKRRFSSTGKDVAFGVAVAARQPWITGQTCGSGFPTTDGIVHNPD HCAVFVLHQDEAGNNLMGMVFGGQGADDGGTAIVTNGSNSAIVTGFTNNSFNFPRTTFGLDAAFVFSLPMGFVTEVTAIG AAPGSIVHSSTITATNGFVRPTGIATDNKTDGIYISGVTNSPSFPRAVTPGPNSANMGFVMKVPHDLSQILYSVLLGQTL TAVAVRQSAPVFPEIYVTGFEHEGNSLEAFMVKMIEDTPTSFASSTAAQVNTSSFTVSWGGSGPVSGAFTFDVFVSDNGG PFTKFQTATTAPSATFTGLPGHTYGFFSIATDAAGNKEPMKTKADFVVTILDVTPPLITPQVTGTLGNNGWYRSAVTVTW NVSDPDSGIVSSTGCAPTNLTSETAGVTLTCSATNGAGLAASVPITIKIDKTLPAISGMPSTGCSLWPPNHKLVQVATVT AADALAGLAPGSFQVSVTSNEPSSDPGDPEIVITPNGSGGFTVQLQADRLGSGNGRIYTVKASVMDKAGNPAAATATCTV PHDKGEK
Sequences:
>Translated_967_residues MIRVSVLSALIAGWALSAATPPQTFHRPLTFEPNHGQAPAEFKWLGQSSGCQILLDAEGATIVIPDKSKLQPASPQLPGT PHPLHIPYSAVRMKLAGSRPWNEISGAEPTGGVSNYVNSRDPKRSVTRIPQYGRVKVANVYKGIDLIFYSNDGDLEYDFA VAPGANPEQIQVAFEGTRGMRVDPKSGDLLVKLPDGSELRQLKPKVYQQAGNKRVEIAGVYRLLEQGRAAFTLAGYDRSQ ALVIDPRLTIARSIGGDKDDQPNAIAVDDLSNSFIIGSTFSVNFPVTNNSQFLKPKSCGSFPFDPGFCGAAVTSNIFIAE VASDGSIPFVTYDGVGLGNGIAVDSSGIYVTGEAFPPDSDIDNFPFGDNAGDLFVQKLSVNGSPGYFTFADEPGEDFGNA IALDDLHNAWAVGASFAAGGEDVLVIEVAPSGERIYKRRFSSTGKDVAFGVAVAARQPWITGQTCGSGFPTTDGIVHNPD HCAVFVLHQDEAGNNLMGMVFGGQGADDGGTAIVTNGSNSAIVTGFTNNSFNFPRTTFGLDAAFVFSLPMGFVTEVTAIG AAPGSIVHSSTITATNGFVRPTGIATDNKTDGIYISGVTNSPSFPRAVTPGPNSANMGFVMKVPHDLSQILYSVLLGQTL TAVAVRQSAPVFPEIYVTGFEHEGNSLEAFMVKMIEDTPTSFASSTAAQVNTSSFTVSWGGSGPVSGAFTFDVFVSDNGG PFTKFQTATTAPSATFTGLPGHTYGFFSIATDAAGNKEPMKTKADFVVTILDVTPPLITPQVTGTLGNNGWYRSAVTVTW NVSDPDSGIVSSTGCAPTNLTSETAGVTLTCSATNGAGLAASVPITIKIDKTLPAISGMPSTGCSLWPPNHKLVQVATVT AADALAGLAPGSFQVSVTSNEPSSDPGDPEIVITPNGSGGFTVQLQADRLGSGNGRIYTVKASVMDKAGNPAAATATCTV PHDKGEK >Mature_967_residues MIRVSVLSALIAGWALSAATPPQTFHRPLTFEPNHGQAPAEFKWLGQSSGCQILLDAEGATIVIPDKSKLQPASPQLPGT PHPLHIPYSAVRMKLAGSRPWNEISGAEPTGGVSNYVNSRDPKRSVTRIPQYGRVKVANVYKGIDLIFYSNDGDLEYDFA VAPGANPEQIQVAFEGTRGMRVDPKSGDLLVKLPDGSELRQLKPKVYQQAGNKRVEIAGVYRLLEQGRAAFTLAGYDRSQ ALVIDPRLTIARSIGGDKDDQPNAIAVDDLSNSFIIGSTFSVNFPVTNNSQFLKPKSCGSFPFDPGFCGAAVTSNIFIAE VASDGSIPFVTYDGVGLGNGIAVDSSGIYVTGEAFPPDSDIDNFPFGDNAGDLFVQKLSVNGSPGYFTFADEPGEDFGNA IALDDLHNAWAVGASFAAGGEDVLVIEVAPSGERIYKRRFSSTGKDVAFGVAVAARQPWITGQTCGSGFPTTDGIVHNPD HCAVFVLHQDEAGNNLMGMVFGGQGADDGGTAIVTNGSNSAIVTGFTNNSFNFPRTTFGLDAAFVFSLPMGFVTEVTAIG AAPGSIVHSSTITATNGFVRPTGIATDNKTDGIYISGVTNSPSFPRAVTPGPNSANMGFVMKVPHDLSQILYSVLLGQTL TAVAVRQSAPVFPEIYVTGFEHEGNSLEAFMVKMIEDTPTSFASSTAAQVNTSSFTVSWGGSGPVSGAFTFDVFVSDNGG PFTKFQTATTAPSATFTGLPGHTYGFFSIATDAAGNKEPMKTKADFVVTILDVTPPLITPQVTGTLGNNGWYRSAVTVTW NVSDPDSGIVSSTGCAPTNLTSETAGVTLTCSATNGAGLAASVPITIKIDKTLPAISGMPSTGCSLWPPNHKLVQVATVT AADALAGLAPGSFQVSVTSNEPSSDPGDPEIVITPNGSGGFTVQLQADRLGSGNGRIYTVKASVMDKAGNPAAATATCTV PHDKGEK
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100836; Mature: 100836
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVSVLSALIAGWALSAATPPQTFHRPLTFEPNHGQAPAEFKWLGQSSGCQILLDAEGA CEEHHHHHHHHHHHECCCCCCHHHHCCCEEECCCCCCCCCEEEEECCCCCCEEEEECCCC TIVIPDKSKLQPASPQLPGTPHPLHIPYSAVRMKLAGSRPWNEISGAEPTGGVSNYVNSR EEEECCCCCCCCCCCCCCCCCCEEECCHHHEEEEECCCCCCHHCCCCCCCCCHHHHCCCC DPKRSVTRIPQYGRVKVANVYKGIDLIFYSNDGDLEYDFAVAPGANPEQIQVAFEGTRGM CCHHHHHHCCCCCCEEEEEEECCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCC RVDPKSGDLLVKLPDGSELRQLKPKVYQQAGNKRVEIAGVYRLLEQGRAAFTLAGYDRSQ EECCCCCCEEEECCCCCHHHHHCHHHHHHCCCCEEEEHHHHHHHHCCCEEEEEECCCCCC ALVIDPRLTIARSIGGDKDDQPNAIAVDDLSNSFIIGSTFSVNFPVTNNSQFLKPKSCGS EEEECCCEEEHHHCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCEECCCCCCC FPFDPGFCGAAVTSNIFIAEVASDGSIPFVTYDGVGLGNGIAVDSSGIYVTGEAFPPDSD CCCCCCCCCHHHHCCEEEEEECCCCCCCEEEECCCCCCCCEEECCCCEEEECCCCCCCCC IDNFPFGDNAGDLFVQKLSVNGSPGYFTFADEPGEDFGNAIALDDLHNAWAVGASFAAGG CCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHCCEEEECCCCCHHEECCEECCCC EDVLVIEVAPSGERIYKRRFSSTGKDVAFGVAVAARQPWITGQTCGSGFPTTDGIVHNPD CCEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCC HCAVFVLHQDEAGNNLMGMVFGGQGADDGGTAIVTNGSNSAIVTGFTNNSFNFPRTTFGL CEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC DAAFVFSLPMGFVTEVTAIGAAPGSIVHSSTITATNGFVRPTGIATDNKTDGIYISGVTN CEEEEECCCHHHHHHHHHHCCCCCCEEECCEEEECCCEECCCCCCCCCCCCCEEEEECCC SPSFPRAVTPGPNSANMGFVMKVPHDLSQILYSVLLGQTLTAVAVRQSAPVFPEIYVTGF CCCCCEEECCCCCCCCCEEEEECCHHHHHHHHHHHHCCHHEEHHHHCCCCCCCEEEEEEE EHEGNSLEAFMVKMIEDTPTSFASSTAAQVNTSSFTVSWGGSGPVSGAFTFDVFVSDNGG ECCCCCHHHHHHHHHHCCCCHHHCCCHHEEECCEEEEECCCCCCCCCEEEEEEEEECCCC PFTKFQTATTAPSATFTGLPGHTYGFFSIATDAAGNKEPMKTKADFVVTILDVTPPLITP CCEEEEECCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCC QVTGTLGNNGWYRSAVTVTWNVSDPDSGIVSSTGCAPTNLTSETAGVTLTCSATNGAGLA EEEEECCCCCEEEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCEE ASVPITIKIDKTLPAISGMPSTGCSLWPPNHKLVQVATVTAADALAGLAPGSFQVSVTSN EECEEEEEECCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCEEEEEECC EPSSDPGDPEIVITPNGSGGFTVQLQADRLGSGNGRIYTVKASVMDKAGNPAAATATCTV CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEHEECCCCCCCCEEEEEEC PHDKGEK CCCCCCC >Mature Secondary Structure MIRVSVLSALIAGWALSAATPPQTFHRPLTFEPNHGQAPAEFKWLGQSSGCQILLDAEGA CEEHHHHHHHHHHHECCCCCCHHHHCCCEEECCCCCCCCCEEEEECCCCCCEEEEECCCC TIVIPDKSKLQPASPQLPGTPHPLHIPYSAVRMKLAGSRPWNEISGAEPTGGVSNYVNSR EEEECCCCCCCCCCCCCCCCCCEEECCHHHEEEEECCCCCCHHCCCCCCCCCHHHHCCCC DPKRSVTRIPQYGRVKVANVYKGIDLIFYSNDGDLEYDFAVAPGANPEQIQVAFEGTRGM CCHHHHHHCCCCCCEEEEEEECCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCC RVDPKSGDLLVKLPDGSELRQLKPKVYQQAGNKRVEIAGVYRLLEQGRAAFTLAGYDRSQ EECCCCCCEEEECCCCCHHHHHCHHHHHHCCCCEEEEHHHHHHHHCCCEEEEEECCCCCC ALVIDPRLTIARSIGGDKDDQPNAIAVDDLSNSFIIGSTFSVNFPVTNNSQFLKPKSCGS EEEECCCEEEHHHCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCEECCCCCCC FPFDPGFCGAAVTSNIFIAEVASDGSIPFVTYDGVGLGNGIAVDSSGIYVTGEAFPPDSD CCCCCCCCCHHHHCCEEEEEECCCCCCCEEEECCCCCCCCEEECCCCEEEECCCCCCCCC IDNFPFGDNAGDLFVQKLSVNGSPGYFTFADEPGEDFGNAIALDDLHNAWAVGASFAAGG CCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHCCEEEECCCCCHHEECCEECCCC EDVLVIEVAPSGERIYKRRFSSTGKDVAFGVAVAARQPWITGQTCGSGFPTTDGIVHNPD CCEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCC HCAVFVLHQDEAGNNLMGMVFGGQGADDGGTAIVTNGSNSAIVTGFTNNSFNFPRTTFGL CEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC DAAFVFSLPMGFVTEVTAIGAAPGSIVHSSTITATNGFVRPTGIATDNKTDGIYISGVTN CEEEEECCCHHHHHHHHHHCCCCCCEEECCEEEECCCEECCCCCCCCCCCCCEEEEECCC SPSFPRAVTPGPNSANMGFVMKVPHDLSQILYSVLLGQTLTAVAVRQSAPVFPEIYVTGF CCCCCEEECCCCCCCCCEEEEECCHHHHHHHHHHHHCCHHEEHHHHCCCCCCCEEEEEEE EHEGNSLEAFMVKMIEDTPTSFASSTAAQVNTSSFTVSWGGSGPVSGAFTFDVFVSDNGG ECCCCCHHHHHHHHHHCCCCHHHCCCHHEEECCEEEEECCCCCCCCCEEEEEEEEECCCC PFTKFQTATTAPSATFTGLPGHTYGFFSIATDAAGNKEPMKTKADFVVTILDVTPPLITP CCEEEEECCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCC QVTGTLGNNGWYRSAVTVTWNVSDPDSGIVSSTGCAPTNLTSETAGVTLTCSATNGAGLA EEEEECCCCCEEEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCEE ASVPITIKIDKTLPAISGMPSTGCSLWPPNHKLVQVATVTAADALAGLAPGSFQVSVTSN EECEEEEEECCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCEEEEEECC EPSSDPGDPEIVITPNGSGGFTVQLQADRLGSGNGRIYTVKASVMDKAGNPAAATATCTV CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEHEECCCCCCCCEEEEEEC PHDKGEK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA