| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622554
Identifier: 116622554
GI number: 116622554
Start: 4365889
End: 4367256
Strand: Reverse
Name: 116622554
Synonym: Acid_3452
Alternate gene names: NA
Gene position: 4367256-4365889 (Counterclockwise)
Preceding gene: 116622555
Following gene: 116622552
Centisome position: 43.82
GC content: 61.04
Gene sequence:
>1368_bases ATGTCACGCAGACTCCATATTTCGGTGCGAATCTCACTACTGATCGCGCTCTTTTCTTTGGGGGCTTTCGCCGAGGATCG GTTCTTAGTCAAGGTGAACGGCGATATCAACGCGCTCGCCCGGCATTACGGATTAACGGTAGTACAGTCGCTGGGCGGCA GCGCCACCGGAATGCACGTGCTTTCCTCCAAAGGCGCCAATCCCCACGACCTGGCACGCAGCCTGGCCGCCGAGTTTTCG GTCCGCAGCGTGGAGCCCGATAACGCCGTCATCCTGCCGGGAATCAAACCGGCATCCGCGGTGGTCCGTTCGCCGGCATC CACGTCCGGCTTTTCGATTTCGAGCACGCTGGTGAGGTATCACAATTCGTATGTCGCCTCGGGGTATGTGAATCAACCCG CGGTGGGCCTGATCAACATGGCCAGCGCGCAGAAAATGTCAACGGGCGGCGGAATCGTGGCCACCATCGATACGGGCGCG GATTTCACCCATCCGGGCCTGCTGGGGTCGCTAACGCCGGGCTGGGATTTCGTCAACAATCTGCCCTTTGGGCAGGAACA GGCGGACATCAATAAAGCCGGCGCCACCGTCGCCCAGGAAACCACGCCGATTCTGGACCAGGAGACCACCCCGATTCTGG ACGGGGGAACCGCAATCATCCTTACGCAGGAGACCACGCCGATTTTGGATCAGGAAACCACGCCGATTCTGGACGGGACC AAGTATCCGGCATTCGGTCACGGCACCATGGTGGCCAGCCTGATTCACCTGGTGGCTCCCGACGCGCGGATCATGCCGCT GCGCGCATTCGGCGCGAACGGCAGTTCCAGCATTTCGCAGATCGTGGCCGCGGTTCACTATGCGGTAGAGCACAACGTCG ATGTCATCAATATGAGCTTCAGTGTTTCGTCGGACTCGCCGGCTCTGAAAGACGCCATGGAATTCGCTTTCAATAGCGGG CTGGTGCTGGTGGCGGCAGCGGGGAACAGCGGACAGGCTGCGACCGTCTATCCGGCGGCATACTCCACCGTCATGGGCGT GGGCGCGACGGACAATTTCCTGCAGCGCGCCTTCTTTTCGAATTTCGGCCAACCGTTGGTTACCCTGGCCGCGCCGGGAC AGGACATCATCGCGATGTATCCGATGAATCATTACGCCAAGGTCTCCGGCACCTCCTTCAGCGCACCGCTGGTAGCGGGG GGCGCAGCCCTGCTGGTGGACCTTAATAAGAAGCTCAACGAGACGTCAGCCACGGCGGCGTTGTCGCATGCGCACGCACT TGCTCCCGGACTGGAATTGGGGGCGGGCGAATTGGACCTGTTCCAGGCCTGCATGAGTCTGCCGAGATCGGCCGGCGGTA ACTGGTAG
Upstream 100 bases:
>100_bases CGCTAAAGAAATTTACGTCGGATCAACCGGCCGTCCAGAGCCAGACCGGCGTTCGGAGTCGATCCGAAGAGCAGTAACCG GGGTCAAAAGGGAAACTCAC
Downstream 100 bases:
>100_bases TTAAGCGGGAGACTGTTCCGGTAATCCAAAGCCGGGACAGAAGGACCTTGAAATGGGGAAAGCCTAGCCTATGTCTATGA GAGCGAAGACCGCGGAACAT
Product: fervidolysin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSRRLHISVRISLLIALFSLGAFAEDRFLVKVNGDINALARHYGLTVVQSLGGSATGMHVLSSKGANPHDLARSLAAEFS VRSVEPDNAVILPGIKPASAVVRSPASTSGFSISSTLVRYHNSYVASGYVNQPAVGLINMASAQKMSTGGGIVATIDTGA DFTHPGLLGSLTPGWDFVNNLPFGQEQADINKAGATVAQETTPILDQETTPILDGGTAIILTQETTPILDQETTPILDGT KYPAFGHGTMVASLIHLVAPDARIMPLRAFGANGSSSISQIVAAVHYAVEHNVDVINMSFSVSSDSPALKDAMEFAFNSG LVLVAAAGNSGQAATVYPAAYSTVMGVGATDNFLQRAFFSNFGQPLVTLAAPGQDIIAMYPMNHYAKVSGTSFSAPLVAG GAALLVDLNKKLNETSATAALSHAHALAPGLELGAGELDLFQACMSLPRSAGGNW
Sequences:
>Translated_455_residues MSRRLHISVRISLLIALFSLGAFAEDRFLVKVNGDINALARHYGLTVVQSLGGSATGMHVLSSKGANPHDLARSLAAEFS VRSVEPDNAVILPGIKPASAVVRSPASTSGFSISSTLVRYHNSYVASGYVNQPAVGLINMASAQKMSTGGGIVATIDTGA DFTHPGLLGSLTPGWDFVNNLPFGQEQADINKAGATVAQETTPILDQETTPILDGGTAIILTQETTPILDQETTPILDGT KYPAFGHGTMVASLIHLVAPDARIMPLRAFGANGSSSISQIVAAVHYAVEHNVDVINMSFSVSSDSPALKDAMEFAFNSG LVLVAAAGNSGQAATVYPAAYSTVMGVGATDNFLQRAFFSNFGQPLVTLAAPGQDIIAMYPMNHYAKVSGTSFSAPLVAG GAALLVDLNKKLNETSATAALSHAHALAPGLELGAGELDLFQACMSLPRSAGGNW >Mature_454_residues SRRLHISVRISLLIALFSLGAFAEDRFLVKVNGDINALARHYGLTVVQSLGGSATGMHVLSSKGANPHDLARSLAAEFSV RSVEPDNAVILPGIKPASAVVRSPASTSGFSISSTLVRYHNSYVASGYVNQPAVGLINMASAQKMSTGGGIVATIDTGAD FTHPGLLGSLTPGWDFVNNLPFGQEQADINKAGATVAQETTPILDQETTPILDGGTAIILTQETTPILDQETTPILDGTK YPAFGHGTMVASLIHLVAPDARIMPLRAFGANGSSSISQIVAAVHYAVEHNVDVINMSFSVSSDSPALKDAMEFAFNSGL VLVAAAGNSGQAATVYPAAYSTVMGVGATDNFLQRAFFSNFGQPLVTLAAPGQDIIAMYPMNHYAKVSGTSFSAPLVAGG AALLVDLNKKLNETSATAALSHAHALAPGLELGAGELDLFQACMSLPRSAGGNW
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4506775, Length=228, Percent_Identity=32.0175438596491, Blast_Score=70, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319893, Length=178, Percent_Identity=35.3932584269663, Blast_Score=78, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6320775, Length=196, Percent_Identity=33.6734693877551, Blast_Score=73, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6324576, Length=174, Percent_Identity=32.183908045977, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 47136; Mature: 47005
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLHISVRISLLIALFSLGAFAEDRFLVKVNGDINALARHYGLTVVQSLGGSATGMHV CCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHH LSSKGANPHDLARSLAAEFSVRSVEPDNAVILPGIKPASAVVRSPASTSGFSISSTLVRY HHCCCCCHHHHHHHHHHHHHEEEECCCCEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHH HNSYVASGYVNQPAVGLINMASAQKMSTGGGIVATIDTGADFTHPGLLGSLTPGWDFVNN HCCEEECCCCCCCCCCEEECCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHC LPFGQEQADINKAGATVAQETTPILDQETTPILDGGTAIILTQETTPILDQETTPILDGT CCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCC KYPAFGHGTMVASLIHLVAPDARIMPLRAFGANGSSSISQIVAAVHYAVEHNVDVINMSF CCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEE SVSSDSPALKDAMEFAFNSGLVLVAAAGNSGQAATVYPAAYSTVMGVGATDNFLQRAFFS EECCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEHHHHHHHEECCCCHHHHHHHHHH NFGQPLVTLAAPGQDIIAMYPMNHYAKVSGTSFSAPLVAGGAALLVDLNKKLNETSATAA HCCCCEEEEECCCCCEEEECCCCCEEEECCCCCCCCHHCCCEEEEEECCHHCCHHHHHHH LSHAHALAPGLELGAGELDLFQACMSLPRSAGGNW HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SRRLHISVRISLLIALFSLGAFAEDRFLVKVNGDINALARHYGLTVVQSLGGSATGMHV CCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHH LSSKGANPHDLARSLAAEFSVRSVEPDNAVILPGIKPASAVVRSPASTSGFSISSTLVRY HHCCCCCHHHHHHHHHHHHHEEEECCCCEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHH HNSYVASGYVNQPAVGLINMASAQKMSTGGGIVATIDTGADFTHPGLLGSLTPGWDFVNN HCCEEECCCCCCCCCCEEECCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHC LPFGQEQADINKAGATVAQETTPILDQETTPILDGGTAIILTQETTPILDQETTPILDGT CCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCC KYPAFGHGTMVASLIHLVAPDARIMPLRAFGANGSSSISQIVAAVHYAVEHNVDVINMSF CCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEE SVSSDSPALKDAMEFAFNSGLVLVAAAGNSGQAATVYPAAYSTVMGVGATDNFLQRAFFS EECCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEHHHHHHHEECCCCHHHHHHHHHH NFGQPLVTLAAPGQDIIAMYPMNHYAKVSGTSFSAPLVAGGAALLVDLNKKLNETSATAA HCCCCEEEEECCCCCEEEECCCCCEEEECCCCCCCCHHCCCEEEEEECCHHCCHHHHHHH LSHAHALAPGLELGAGELDLFQACMSLPRSAGGNW HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]