| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622549
Identifier: 116622549
GI number: 116622549
Start: 4357770
End: 4360517
Strand: Reverse
Name: 116622549
Synonym: Acid_3447
Alternate gene names: NA
Gene position: 4360517-4357770 (Counterclockwise)
Preceding gene: 116622551
Following gene: 116622547
Centisome position: 43.76
GC content: 64.48
Gene sequence:
>2748_bases ATGGATCGCGCCTTAAATGTTCACCCAATGAAGCGATCACTCTCTCTCTTCTTTTCTGTGGCGGTGCTTTCGCTGCCCGC GCAGCGCCTGACATCGGAATTGGTGGGCGACCTGGCGATGCGCAACATCACCGGAACCTTCACCTCGGGGCGCATCGCGG ATGTGGCGGTGGACCCGCGCAATCGCAGCATCTGGTACGTGGCGACGGCGTCGGGTGGACTATGGAAGACCACCAATCAC GGCATCAGCTTTCAGCCGATCTTCGACGAGGGCGGATCGTACTCACTGGGCTGCGTTACCGTGGACCCGAAGAATCCCGA CACCGTATGGCTGGGAACCGGCGAGAACCAGGCGCAGCGCGCCATCGGCTACGGCGATGGAGTTTATAAAAGCACGGACG CCGGCAAGACGTGGAAGAACGCCGGGCTGCCGAATTCCGAGCACATCGCCAAAATCTGGGTGGACCCGCGCAACACGAAT GTGGTGTGGGTGGCGGCTCAGGGTCCGCTGTTCTCGCCGGGCGGCGATCGCGGTTTGTATAAGACGACCGATGGCGGCGC GACGTGGAAGGCCTCGCTGACGATCACGGAGAACACCGGCGTCACGGATTTCGACGTGAACCCGCGCAATCCCGACATCA TGTATGCAGCGGCGTACCAACGCCGGCGCACCACGAGCATTGTCGTGGCGGGCGGCCCGGATTCCGGCATCTTCAAGACC ACCGACGCCGGCGCGCACTGGACGCGGCTGACCGAAGGCATTCCTACGGTGGACAAGGGTCGGATCGCGCTGGCCGTGTC GCCTCAGAATCCCGAAGTCATCTACGCCACGATCACGACCAATAAGGACAACAAGCAGACCGGCATGTACCGCTCCGACG ACGCGGGCGCGCACTGGGCCAAGCTGAACGACTTCATCGTGCAGGATCCGGAATACTACGGCGAGATCTTCGCCGATCCG TTCAAGGAAGGCCGCGTATACCTCATGGACATGGCGGTGCGCGTGAGCGAGGACGCGGGCAAGACGATCACCGCCGCCGG ATGGCAGGTGCACAGCGATAACCACTCCCTGACCTTTGATCCGACCGATGCCAACCATCTGCTGGAGGGCAACGACGGCG GCCTCTACGAGACTTACGACCACGGCAAAACGTGGCGCCACTTCAATAACATTCCGGTGACGCAGTTCTACCGGGTGAGC GTGGATAATGCCCTGCCCTTCTACAACATTTACGGCGGCGCGCAGGACAACGGGTCGCAGGGCGTGCCCTCGCGAACCAT CAATCGCGCCGGGATCCGCACCAGCGACTGGTTGAATACGGGCGGCGGCGACGGCTTCCAATCGCGCGTGGATTATGCCG ACCCGAACACCGTCTACGCATGCTCGCAGAACATCGGCTGCAACCGCGTGGATCTGAAGACCGGGGTCAGCACCAACATT CACCCGCGGTTCGGCGAGGCCGATGCGAAGCTGCGGTCGCGGTGGGACCTGCCATTCATCATCAGCCCGCATTCGCACGA GCGGCTCTACATTGCCGGCAACCGCCTGATGCGCAGCGACGATCGCGGCGCGACGTGGAAGTTGGTCAGCGAGGAGTTGA CCCGCGCCATCGACCGCGACACCATCCCGGTGATGGGAAAGCTGTGGGGAGCGGACGCGGTGTGGAAGAACGCGTTTACC GATCAGTTCGGCACGGGCACCTCCATCGCCGAATCGCCGTTGAAGGAGGGCCTGCTGTTCGTGGGCACGGACGACGGGCT GGTGCAGATCTCCCAGGACGGCGGCGCGACCTGGCACAAGGTGGACAAGTTCCCCGGCGTGCCGGAGATGACTTACGTGA CCGACGTCTTCCCTTCCCCGCACGACGTGAACACGGTATTTGTGACCCTCAACGATTTTCACCGCGGCAACTTCAAGCCG TACCTGATGAAGAGCAGCGACCTCGGGAAAACGTGGGCGAGCATCTCGGGCGACCTGCCGCTGCGGGATCCGGCGTGGAC CGTCGTCCAGGATCCCGTGAACGCGAAGCTGCTCTTCGTAGGCACGGAATTCGGGCTGAGCTTCTCGGTGGACGCCGGAC TCCACTGGGTTAAAGTTAAGGGCGGCATGCCGATCACGCCGATTCGCGATCTGGAGATCCAGGCGCGGGAGAGCGACCTG ATCGCGGCGTCGTTCGGGCGCGGCTTTTTCGTATTCGACGACTTCTCGGCGCTGCGCAAGCTGACGCCGGAATTGCTCTC GCAGGATGGCGTGCTGTTCCCGCCGGGACGCAAAGCTCGGGCCTACGAGGAGATCGGCTATTACCGGGCACAGGGAGATA ACATCGCGTCGCCCAATCCTCCGGCGGGCGCGCTGTTGACCTACTACCTTCGCGACGAAACGCCCGCGGGCGGCAAGACG GTGCTCACCATCGCCGACGCGGCGGGCAAGCAGGTGCGGCAACTGGACGCATCGTCGAAGGCCGGCCTGCACCGGACCCC ATGGGACCTGCGCGAGCAGGCGCCTCCGGCGGGCGCGGCGGCGCAGAGGCCGACCCCTCCGGTGGAGGGCGGCGAGGAAG CCACGCCCCCTGCCGCCGGCCGCGGAGGACGCGGCGGTGGCGGCGGCGGTGGCGGGCGCGGGTTCGCGAGATTGGGACCG CTGGTGAAGCCCGGGAACTACACAGTCACGCTGGGAAGACTGGTCAGCGGCACCGTGACACCAATCGGACAGCCGCAGAC CGTGGAAGTCGTGGCGCTCGAGCGGTAA
Upstream 100 bases:
>100_bases TTGGTCATTTCCTCCAGTTCAAGAAGAATAACCCACGCGCGCGTGGTGATCAAGAAAAAATTTATTAATCTGCCGGACAA ACTCTGGTAACGCTTGCAGC
Downstream 100 bases:
>100_bases GGCCCAAGGGCGAGCTAGCTGGACAAAGGCGGTCTGTGAAACCTTCGGACGCGAAAGCTCAAGAAGCCTTCACAGACCCC TCCGGAAGCGTTCCACACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 915; Mature: 915
Protein sequence:
>915_residues MDRALNVHPMKRSLSLFFSVAVLSLPAQRLTSELVGDLAMRNITGTFTSGRIADVAVDPRNRSIWYVATASGGLWKTTNH GISFQPIFDEGGSYSLGCVTVDPKNPDTVWLGTGENQAQRAIGYGDGVYKSTDAGKTWKNAGLPNSEHIAKIWVDPRNTN VVWVAAQGPLFSPGGDRGLYKTTDGGATWKASLTITENTGVTDFDVNPRNPDIMYAAAYQRRRTTSIVVAGGPDSGIFKT TDAGAHWTRLTEGIPTVDKGRIALAVSPQNPEVIYATITTNKDNKQTGMYRSDDAGAHWAKLNDFIVQDPEYYGEIFADP FKEGRVYLMDMAVRVSEDAGKTITAAGWQVHSDNHSLTFDPTDANHLLEGNDGGLYETYDHGKTWRHFNNIPVTQFYRVS VDNALPFYNIYGGAQDNGSQGVPSRTINRAGIRTSDWLNTGGGDGFQSRVDYADPNTVYACSQNIGCNRVDLKTGVSTNI HPRFGEADAKLRSRWDLPFIISPHSHERLYIAGNRLMRSDDRGATWKLVSEELTRAIDRDTIPVMGKLWGADAVWKNAFT DQFGTGTSIAESPLKEGLLFVGTDDGLVQISQDGGATWHKVDKFPGVPEMTYVTDVFPSPHDVNTVFVTLNDFHRGNFKP YLMKSSDLGKTWASISGDLPLRDPAWTVVQDPVNAKLLFVGTEFGLSFSVDAGLHWVKVKGGMPITPIRDLEIQARESDL IAASFGRGFFVFDDFSALRKLTPELLSQDGVLFPPGRKARAYEEIGYYRAQGDNIASPNPPAGALLTYYLRDETPAGGKT VLTIADAAGKQVRQLDASSKAGLHRTPWDLREQAPPAGAAAQRPTPPVEGGEEATPPAAGRGGRGGGGGGGGRGFARLGP LVKPGNYTVTLGRLVSGTVTPIGQPQTVEVVALER
Sequences:
>Translated_915_residues MDRALNVHPMKRSLSLFFSVAVLSLPAQRLTSELVGDLAMRNITGTFTSGRIADVAVDPRNRSIWYVATASGGLWKTTNH GISFQPIFDEGGSYSLGCVTVDPKNPDTVWLGTGENQAQRAIGYGDGVYKSTDAGKTWKNAGLPNSEHIAKIWVDPRNTN VVWVAAQGPLFSPGGDRGLYKTTDGGATWKASLTITENTGVTDFDVNPRNPDIMYAAAYQRRRTTSIVVAGGPDSGIFKT TDAGAHWTRLTEGIPTVDKGRIALAVSPQNPEVIYATITTNKDNKQTGMYRSDDAGAHWAKLNDFIVQDPEYYGEIFADP FKEGRVYLMDMAVRVSEDAGKTITAAGWQVHSDNHSLTFDPTDANHLLEGNDGGLYETYDHGKTWRHFNNIPVTQFYRVS VDNALPFYNIYGGAQDNGSQGVPSRTINRAGIRTSDWLNTGGGDGFQSRVDYADPNTVYACSQNIGCNRVDLKTGVSTNI HPRFGEADAKLRSRWDLPFIISPHSHERLYIAGNRLMRSDDRGATWKLVSEELTRAIDRDTIPVMGKLWGADAVWKNAFT DQFGTGTSIAESPLKEGLLFVGTDDGLVQISQDGGATWHKVDKFPGVPEMTYVTDVFPSPHDVNTVFVTLNDFHRGNFKP YLMKSSDLGKTWASISGDLPLRDPAWTVVQDPVNAKLLFVGTEFGLSFSVDAGLHWVKVKGGMPITPIRDLEIQARESDL IAASFGRGFFVFDDFSALRKLTPELLSQDGVLFPPGRKARAYEEIGYYRAQGDNIASPNPPAGALLTYYLRDETPAGGKT VLTIADAAGKQVRQLDASSKAGLHRTPWDLREQAPPAGAAAQRPTPPVEGGEEATPPAAGRGGRGGGGGGGGRGFARLGP LVKPGNYTVTLGRLVSGTVTPIGQPQTVEVVALER >Mature_915_residues MDRALNVHPMKRSLSLFFSVAVLSLPAQRLTSELVGDLAMRNITGTFTSGRIADVAVDPRNRSIWYVATASGGLWKTTNH GISFQPIFDEGGSYSLGCVTVDPKNPDTVWLGTGENQAQRAIGYGDGVYKSTDAGKTWKNAGLPNSEHIAKIWVDPRNTN VVWVAAQGPLFSPGGDRGLYKTTDGGATWKASLTITENTGVTDFDVNPRNPDIMYAAAYQRRRTTSIVVAGGPDSGIFKT TDAGAHWTRLTEGIPTVDKGRIALAVSPQNPEVIYATITTNKDNKQTGMYRSDDAGAHWAKLNDFIVQDPEYYGEIFADP FKEGRVYLMDMAVRVSEDAGKTITAAGWQVHSDNHSLTFDPTDANHLLEGNDGGLYETYDHGKTWRHFNNIPVTQFYRVS VDNALPFYNIYGGAQDNGSQGVPSRTINRAGIRTSDWLNTGGGDGFQSRVDYADPNTVYACSQNIGCNRVDLKTGVSTNI HPRFGEADAKLRSRWDLPFIISPHSHERLYIAGNRLMRSDDRGATWKLVSEELTRAIDRDTIPVMGKLWGADAVWKNAFT DQFGTGTSIAESPLKEGLLFVGTDDGLVQISQDGGATWHKVDKFPGVPEMTYVTDVFPSPHDVNTVFVTLNDFHRGNFKP YLMKSSDLGKTWASISGDLPLRDPAWTVVQDPVNAKLLFVGTEFGLSFSVDAGLHWVKVKGGMPITPIRDLEIQARESDL IAASFGRGFFVFDDFSALRKLTPELLSQDGVLFPPGRKARAYEEIGYYRAQGDNIASPNPPAGALLTYYLRDETPAGGKT VLTIADAAGKQVRQLDASSKAGLHRTPWDLREQAPPAGAAAQRPTPPVEGGEEATPPAAGRGGRGGGGGGGGRGFARLGP LVKPGNYTVTLGRLVSGTVTPIGQPQTVEVVALER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99208; Mature: 99208
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRALNVHPMKRSLSLFFSVAVLSLPAQRLTSELVGDLAMRNITGTFTSGRIADVAVDPR CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC NRSIWYVATASGGLWKTTNHGISFQPIFDEGGSYSLGCVTVDPKNPDTVWLGTGENQAQR CCEEEEEEECCCCEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCEEEEECCCCHHHH AIGYGDGVYKSTDAGKTWKNAGLPNSEHIAKIWVDPRNTNVVWVAAQGPLFSPGGDRGLY HCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCEECCCCCCCCE KTTDGGATWKASLTITENTGVTDFDVNPRNPDIMYAAAYQRRRTTSIVVAGGPDSGIFKT EECCCCCEEEEEEEEECCCCCEEECCCCCCCCEEEEEHHCCCCCEEEEEECCCCCCCEEE TDAGAHWTRLTEGIPTVDKGRIALAVSPQNPEVIYATITTNKDNKQTGMYRSDDAGAHWA CCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEECCCCCCEEE KLNDFIVQDPEYYGEIFADPFKEGRVYLMDMAVRVSEDAGKTITAAGWQVHSDNHSLTFD ECCCEEEECHHHHHHHHCCHHHCCCEEEEEEEEEECCCCCCEEEECCEEEECCCCEEEEC PTDANHLLEGNDGGLYETYDHGKTWRHFNNIPVTQFYRVSVDNALPFYNIYGGAQDNGSQ CCCCCCEEECCCCCEEEECCCCCCHHCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC GVPSRTINRAGIRTSDWLNTGGGDGFQSRVDYADPNTVYACSQNIGCNRVDLKTGVSTNI CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCC HPRFGEADAKLRSRWDLPFIISPHSHERLYIAGNRLMRSDDRGATWKLVSEELTRAIDRD CCCCCCCHHHHHHCCCCCEEECCCCCCEEEEECCEEEECCCCCCEEEHHHHHHHHHHCCC TIPVMGKLWGADAVWKNAFTDQFGTGTSIAESPLKEGLLFVGTDDGLVQISQDGGATWHK CCCHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHCCEEEEECCCCEEEEECCCCCCEEE VDKFPGVPEMTYVTDVFPSPHDVNTVFVTLNDFHRGNFKPYLMKSSDLGKTWASISGDLP HHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHCCCCCC LRDPAWTVVQDPVNAKLLFVGTEFGLSFSVDAGLHWVKVKGGMPITPIRDLEIQARESDL CCCCCCEEEECCCCEEEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCEEEECCCCE IAASFGRGFFVFDDFSALRKLTPELLSQDGVLFPPGRKARAYEEIGYYRAQGDNIASPNP EEEECCCEEEEECCHHHHHHHCHHHHCCCCEEECCCCCCHHHHHHCCEEECCCCCCCCCC PAGALLTYYLRDETPAGGKTVLTIADAAGKQVRQLDASSKAGLHRTPWDLREQAPPAGAA CCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCC AQRPTPPVEGGEEATPPAAGRGGRGGGGGGGGRGFARLGPLVKPGNYTVTLGRLVSGTVT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEECCCCEEEEEEEEECCCCC PIGQPQTVEVVALER CCCCCCEEEEEEECC >Mature Secondary Structure MDRALNVHPMKRSLSLFFSVAVLSLPAQRLTSELVGDLAMRNITGTFTSGRIADVAVDPR CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC NRSIWYVATASGGLWKTTNHGISFQPIFDEGGSYSLGCVTVDPKNPDTVWLGTGENQAQR CCEEEEEEECCCCEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCEEEEECCCCHHHH AIGYGDGVYKSTDAGKTWKNAGLPNSEHIAKIWVDPRNTNVVWVAAQGPLFSPGGDRGLY HCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCEECCCCCCCCE KTTDGGATWKASLTITENTGVTDFDVNPRNPDIMYAAAYQRRRTTSIVVAGGPDSGIFKT EECCCCCEEEEEEEEECCCCCEEECCCCCCCCEEEEEHHCCCCCEEEEEECCCCCCCEEE TDAGAHWTRLTEGIPTVDKGRIALAVSPQNPEVIYATITTNKDNKQTGMYRSDDAGAHWA CCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEECCCCCCEEE KLNDFIVQDPEYYGEIFADPFKEGRVYLMDMAVRVSEDAGKTITAAGWQVHSDNHSLTFD ECCCEEEECHHHHHHHHCCHHHCCCEEEEEEEEEECCCCCCEEEECCEEEECCCCEEEEC PTDANHLLEGNDGGLYETYDHGKTWRHFNNIPVTQFYRVSVDNALPFYNIYGGAQDNGSQ CCCCCCEEECCCCCEEEECCCCCCHHCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC GVPSRTINRAGIRTSDWLNTGGGDGFQSRVDYADPNTVYACSQNIGCNRVDLKTGVSTNI CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCC HPRFGEADAKLRSRWDLPFIISPHSHERLYIAGNRLMRSDDRGATWKLVSEELTRAIDRD CCCCCCCHHHHHHCCCCCEEECCCCCCEEEEECCEEEECCCCCCEEEHHHHHHHHHHCCC TIPVMGKLWGADAVWKNAFTDQFGTGTSIAESPLKEGLLFVGTDDGLVQISQDGGATWHK CCCHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHCCEEEEECCCCEEEEECCCCCCEEE VDKFPGVPEMTYVTDVFPSPHDVNTVFVTLNDFHRGNFKPYLMKSSDLGKTWASISGDLP HHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHCCCCCC LRDPAWTVVQDPVNAKLLFVGTEFGLSFSVDAGLHWVKVKGGMPITPIRDLEIQARESDL CCCCCCEEEECCCCEEEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCEEEECCCCE IAASFGRGFFVFDDFSALRKLTPELLSQDGVLFPPGRKARAYEEIGYYRAQGDNIASPNP EEEECCCEEEEECCHHHHHHHCHHHHCCCCEEECCCCCCHHHHHHCCEEECCCCCCCCCC PAGALLTYYLRDETPAGGKTVLTIADAAGKQVRQLDASSKAGLHRTPWDLREQAPPAGAA CCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCC AQRPTPPVEGGEEATPPAAGRGGRGGGGGGGGRGFARLGPLVKPGNYTVTLGRLVSGTVT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEECCCCEEEEEEEEECCCCC PIGQPQTVEVVALER CCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA