| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is gnl [H]
Identifier: 116622532
GI number: 116622532
Start: 4338391
End: 4340112
Strand: Direct
Name: gnl [H]
Synonym: Acid_3430
Alternate gene names: 116622532
Gene position: 4338391-4340112 (Clockwise)
Preceding gene: 116622529
Following gene: 116622536
Centisome position: 43.53
GC content: 64.63
Gene sequence:
>1722_bases ATGAAAACCCTGGCTTTTCTTTTGACGGCGGCGACGACTCTGTGTGCGCAACCTTACACGCCGAAGGGGCAATTGACGAA ATCCGTCTGGGCGAAGTCCAAGATTTTCCCCGGGACTACGCGCGATGTCCAGGTGTATGTGCCGGCGCAGTACGACGGAG CGAAGGCGGCGTGCGTGATGATCTTCCAGGACGGCAACGGGTTCGCGAGCGCGCAGGGACCGTGGCACGTGCCGGCGGTC ATGGACACGCTGATCGAGCAGGGGGCGATGCCGGTGACGATCGCGATCTTCATCGAGCCGGGCGTGCGTCCGGCGGCGGG CGCAGACCAGATGGCGCGTTACAACCGCAGTTATGAGTACGACGGTTTGGGCGATCGCTACGCTCGGTTCCTGATCGAAG AAATCCTGCCGGAAGTTGGGAAGCAATACCGGCTTTCGAGCGACCCGAACGATCGCGCGCTGGCGGGGTCGAGCTCGGGC GGGATCGCGAGCTTCACGGCGGCGTGGGAGCGGCCCGACGCGTTTCACCGCGTGATGAGCTTCATCGGCAGCTACACGAA TTTGCGCGGGGGAGACAGCTATATCGACCTGATTCGCAAGATGGAGCCGAAGCCGCTGCGCGTGTTCCTGCAGGATGGGT CGGCGGACCAGAATATTTATTCCGGCTGGTGGTGGCTGGCCAACCAGGGGATGGCGAAATCGCTGGAGTATGCGGGGTAC GACGTGAAGTTCGAGCCGGGCGTGGAGGGGCACAATTCAAAGCACGGGGCGGCGATCTTCGCGGACGCGATGCGGTGGCT GTGGCGCGATTATCCGAGGGCGATCGAGGCAGGGAAGGGCGGCGCGGGGCAGCGCCACTACATCACGGAATTCCTGGATC CGGCGCACGATTGGGAGGTCGCCGGCGAAGGCTATCAGTTCGCGGAAGGTCCGGCGGTGGATCGCGAGGGTAACGTCTAT TTCTGCGATGCCGGGGCGTCGCGGATCTATAAAGTGGACGGGGCGGGGAAGGTCACGGTGTTCAAAGAGAACACGGGCGG CGCGACCGGATTGATGTTCGGCGGCGATGGGCGGCTCTACGCGGCGGAGAATCAGCGTAAGCGCGTGGTGGCTTACGCGC CCGATGGCAAGCTATCCGTGATCGCGACTGGCGTGACGCCCAATGACCTGGCGGTGACCAGCAAGGGCGAGGTGTACTTT ACGGACACGCCCGCGCAGCGCGTCTATCACGTGGACGCGAAGGGCGCCCGCCGCGTGGTGTTCCAGGGCGGCGCGGATGG CAATTTGCTGATGCCCAACGGGGTGCGGCTGACGCCGGATGAAGCGCTGCTGGTGGTGGCGGATACGACGGGGCGGACAG CGTGGAGCTTCCACATCGAGGCCGACGGATCGCTGGTTGACGGGCAGCCGTTCTACCATCTGCAGCTGCCGGACGATGTC GCGCAAGGCCCGGTGCGGAGCGGGGCCGATGGGATGACGTTCGACGATCAGGGGCATCTGTACGTGGCGACGAAACTGGG GATTCAGATTTGCGATCAGCCGGGGCGGACGGTGGGGATCATCCGGCGTCCGGGCACGGCGGACGTTTCGAACGTAGTGT TCGCGGGCGCGGGGTTGCAGACACTGTACGCGACGGCGGGAGATAAGATCTACCGGCGGATACTGCGCCGGAAGGGTGTG TTCCCGTGGGCGCCTGTGAGGCTGCCGAAGCCGGGATTGTAG
Upstream 100 bases:
>100_bases GACCTGTTCCTCGGTGGGAGTGCGTTTTTCTTCGGGCTTGGGTTCCATGGCAAGAAGGTAGCACGCAGGGGTCCGCTGTG GCGGTGTAACATTGCGAATA
Downstream 100 bases:
>100_bases AAAGCTACCGCTGGAACTTCAGTTCGTCTTTGAAGGCTTCGAGCGAGTTGTAGACGATGGGGCAATAGCAGGCGCGGTCC ACGAACTCCCACATGCGGCT
Product: gluconolactonase
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MKTLAFLLTAATTLCAQPYTPKGQLTKSVWAKSKIFPGTTRDVQVYVPAQYDGAKAACVMIFQDGNGFASAQGPWHVPAV MDTLIEQGAMPVTIAIFIEPGVRPAAGADQMARYNRSYEYDGLGDRYARFLIEEILPEVGKQYRLSSDPNDRALAGSSSG GIASFTAAWERPDAFHRVMSFIGSYTNLRGGDSYIDLIRKMEPKPLRVFLQDGSADQNIYSGWWWLANQGMAKSLEYAGY DVKFEPGVEGHNSKHGAAIFADAMRWLWRDYPRAIEAGKGGAGQRHYITEFLDPAHDWEVAGEGYQFAEGPAVDREGNVY FCDAGASRIYKVDGAGKVTVFKENTGGATGLMFGGDGRLYAAENQRKRVVAYAPDGKLSVIATGVTPNDLAVTSKGEVYF TDTPAQRVYHVDAKGARRVVFQGGADGNLLMPNGVRLTPDEALLVVADTTGRTAWSFHIEADGSLVDGQPFYHLQLPDDV AQGPVRSGADGMTFDDQGHLYVATKLGIQICDQPGRTVGIIRRPGTADVSNVVFAGAGLQTLYATAGDKIYRRILRRKGV FPWAPVRLPKPGL
Sequences:
>Translated_573_residues MKTLAFLLTAATTLCAQPYTPKGQLTKSVWAKSKIFPGTTRDVQVYVPAQYDGAKAACVMIFQDGNGFASAQGPWHVPAV MDTLIEQGAMPVTIAIFIEPGVRPAAGADQMARYNRSYEYDGLGDRYARFLIEEILPEVGKQYRLSSDPNDRALAGSSSG GIASFTAAWERPDAFHRVMSFIGSYTNLRGGDSYIDLIRKMEPKPLRVFLQDGSADQNIYSGWWWLANQGMAKSLEYAGY DVKFEPGVEGHNSKHGAAIFADAMRWLWRDYPRAIEAGKGGAGQRHYITEFLDPAHDWEVAGEGYQFAEGPAVDREGNVY FCDAGASRIYKVDGAGKVTVFKENTGGATGLMFGGDGRLYAAENQRKRVVAYAPDGKLSVIATGVTPNDLAVTSKGEVYF TDTPAQRVYHVDAKGARRVVFQGGADGNLLMPNGVRLTPDEALLVVADTTGRTAWSFHIEADGSLVDGQPFYHLQLPDDV AQGPVRSGADGMTFDDQGHLYVATKLGIQICDQPGRTVGIIRRPGTADVSNVVFAGAGLQTLYATAGDKIYRRILRRKGV FPWAPVRLPKPGL >Mature_573_residues MKTLAFLLTAATTLCAQPYTPKGQLTKSVWAKSKIFPGTTRDVQVYVPAQYDGAKAACVMIFQDGNGFASAQGPWHVPAV MDTLIEQGAMPVTIAIFIEPGVRPAAGADQMARYNRSYEYDGLGDRYARFLIEEILPEVGKQYRLSSDPNDRALAGSSSG GIASFTAAWERPDAFHRVMSFIGSYTNLRGGDSYIDLIRKMEPKPLRVFLQDGSADQNIYSGWWWLANQGMAKSLEYAGY DVKFEPGVEGHNSKHGAAIFADAMRWLWRDYPRAIEAGKGGAGQRHYITEFLDPAHDWEVAGEGYQFAEGPAVDREGNVY FCDAGASRIYKVDGAGKVTVFKENTGGATGLMFGGDGRLYAAENQRKRVVAYAPDGKLSVIATGVTPNDLAVTSKGEVYF TDTPAQRVYHVDAKGARRVVFQGGADGNLLMPNGVRLTPDEALLVVADTTGRTAWSFHIEADGSLVDGQPFYHLQLPDDV AQGPVRSGADGMTFDDQGHLYVATKLGIQICDQPGRTVGIIRRPGTADVSNVVFAGAGLQTLYATAGDKIYRRILRRKGV FPWAPVRLPKPGL
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 62267; Mature: 62267
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLAFLLTAATTLCAQPYTPKGQLTKSVWAKSKIFPGTTRDVQVYVPAQYDGAKAACVM CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEE IFQDGNGFASAQGPWHVPAVMDTLIEQGAMPVTIAIFIEPGVRPAAGADQMARYNRSYEY EEECCCCEECCCCCEECHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCC DGLGDRYARFLIEEILPEVGKQYRLSSDPNDRALAGSSSGGIASFTAAWERPDAFHRVMS CCCHHHHHHHHHHHHHHHHCHHEECCCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHH FIGSYTNLRGGDSYIDLIRKMEPKPLRVFLQDGSADQNIYSGWWWLANQGMAKSLEYAGY HHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEECCEEEEECCCCHHHHHHCCC DVKFEPGVEGHNSKHGAAIFADAMRWLWRDYPRAIEAGKGGAGQRHYITEFLDPAHDWEV EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEE AGEGYQFAEGPAVDREGNVYFCDAGASRIYKVDGAGKVTVFKENTGGATGLMFGGDGRLY CCCCCEECCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEE AAENQRKRVVAYAPDGKLSVIATGVTPNDLAVTSKGEVYFTDTPAQRVYHVDAKGARRVV EECCCCCEEEEECCCCCEEEEEECCCCCCEEEECCCCEEEECCCHHEEEEECCCCCEEEE FQGGADGNLLMPNGVRLTPDEALLVVADTTGRTAWSFHIEADGSLVDGQPFYHLQLPDDV EECCCCCCEECCCCCEECCCCEEEEEEECCCCEEEEEEEEECCCEECCCCEEEEECCHHH AQGPVRSGADGMTFDDQGHLYVATKLGIQICDQPGRTVGIIRRPGTADVSNVVFAGAGLQ HCCCCCCCCCCCEECCCCCEEEEEECCEEEECCCCCEEEEEECCCCCCCCCEEEECCCHH TLYATAGDKIYRRILRRKGVFPWAPVRLPKPGL HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTLAFLLTAATTLCAQPYTPKGQLTKSVWAKSKIFPGTTRDVQVYVPAQYDGAKAACVM CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEE IFQDGNGFASAQGPWHVPAVMDTLIEQGAMPVTIAIFIEPGVRPAAGADQMARYNRSYEY EEECCCCEECCCCCEECHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCC DGLGDRYARFLIEEILPEVGKQYRLSSDPNDRALAGSSSGGIASFTAAWERPDAFHRVMS CCCHHHHHHHHHHHHHHHHCHHEECCCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHH FIGSYTNLRGGDSYIDLIRKMEPKPLRVFLQDGSADQNIYSGWWWLANQGMAKSLEYAGY HHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEECCEEEEECCCCHHHHHHCCC DVKFEPGVEGHNSKHGAAIFADAMRWLWRDYPRAIEAGKGGAGQRHYITEFLDPAHDWEV EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEE AGEGYQFAEGPAVDREGNVYFCDAGASRIYKVDGAGKVTVFKENTGGATGLMFGGDGRLY CCCCCEECCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEE AAENQRKRVVAYAPDGKLSVIATGVTPNDLAVTSKGEVYFTDTPAQRVYHVDAKGARRVV EECCCCCEEEEECCCCCEEEEEECCCCCCEEEECCCCEEEECCCHHEEEEECCCCCEEEE FQGGADGNLLMPNGVRLTPDEALLVVADTTGRTAWSFHIEADGSLVDGQPFYHLQLPDDV EECCCCCCEECCCCCEECCCCEEEEEEECCCCEEEEEEEEECCCEECCCCEEEEECCHHH AQGPVRSGADGMTFDDQGHLYVATKLGIQICDQPGRTVGIIRRPGTADVSNVVFAGAGLQ HCCCCCCCCCCCEECCCCCEEEEEECCEEEECCCCCEEEEEECCCCCCCCCEEEECCCHH TLYATAGDKIYRRILRRKGVFPWAPVRLPKPGL HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]