Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is gnl [H]

Identifier: 116622532

GI number: 116622532

Start: 4338391

End: 4340112

Strand: Direct

Name: gnl [H]

Synonym: Acid_3430

Alternate gene names: 116622532

Gene position: 4338391-4340112 (Clockwise)

Preceding gene: 116622529

Following gene: 116622536

Centisome position: 43.53

GC content: 64.63

Gene sequence:

>1722_bases
ATGAAAACCCTGGCTTTTCTTTTGACGGCGGCGACGACTCTGTGTGCGCAACCTTACACGCCGAAGGGGCAATTGACGAA
ATCCGTCTGGGCGAAGTCCAAGATTTTCCCCGGGACTACGCGCGATGTCCAGGTGTATGTGCCGGCGCAGTACGACGGAG
CGAAGGCGGCGTGCGTGATGATCTTCCAGGACGGCAACGGGTTCGCGAGCGCGCAGGGACCGTGGCACGTGCCGGCGGTC
ATGGACACGCTGATCGAGCAGGGGGCGATGCCGGTGACGATCGCGATCTTCATCGAGCCGGGCGTGCGTCCGGCGGCGGG
CGCAGACCAGATGGCGCGTTACAACCGCAGTTATGAGTACGACGGTTTGGGCGATCGCTACGCTCGGTTCCTGATCGAAG
AAATCCTGCCGGAAGTTGGGAAGCAATACCGGCTTTCGAGCGACCCGAACGATCGCGCGCTGGCGGGGTCGAGCTCGGGC
GGGATCGCGAGCTTCACGGCGGCGTGGGAGCGGCCCGACGCGTTTCACCGCGTGATGAGCTTCATCGGCAGCTACACGAA
TTTGCGCGGGGGAGACAGCTATATCGACCTGATTCGCAAGATGGAGCCGAAGCCGCTGCGCGTGTTCCTGCAGGATGGGT
CGGCGGACCAGAATATTTATTCCGGCTGGTGGTGGCTGGCCAACCAGGGGATGGCGAAATCGCTGGAGTATGCGGGGTAC
GACGTGAAGTTCGAGCCGGGCGTGGAGGGGCACAATTCAAAGCACGGGGCGGCGATCTTCGCGGACGCGATGCGGTGGCT
GTGGCGCGATTATCCGAGGGCGATCGAGGCAGGGAAGGGCGGCGCGGGGCAGCGCCACTACATCACGGAATTCCTGGATC
CGGCGCACGATTGGGAGGTCGCCGGCGAAGGCTATCAGTTCGCGGAAGGTCCGGCGGTGGATCGCGAGGGTAACGTCTAT
TTCTGCGATGCCGGGGCGTCGCGGATCTATAAAGTGGACGGGGCGGGGAAGGTCACGGTGTTCAAAGAGAACACGGGCGG
CGCGACCGGATTGATGTTCGGCGGCGATGGGCGGCTCTACGCGGCGGAGAATCAGCGTAAGCGCGTGGTGGCTTACGCGC
CCGATGGCAAGCTATCCGTGATCGCGACTGGCGTGACGCCCAATGACCTGGCGGTGACCAGCAAGGGCGAGGTGTACTTT
ACGGACACGCCCGCGCAGCGCGTCTATCACGTGGACGCGAAGGGCGCCCGCCGCGTGGTGTTCCAGGGCGGCGCGGATGG
CAATTTGCTGATGCCCAACGGGGTGCGGCTGACGCCGGATGAAGCGCTGCTGGTGGTGGCGGATACGACGGGGCGGACAG
CGTGGAGCTTCCACATCGAGGCCGACGGATCGCTGGTTGACGGGCAGCCGTTCTACCATCTGCAGCTGCCGGACGATGTC
GCGCAAGGCCCGGTGCGGAGCGGGGCCGATGGGATGACGTTCGACGATCAGGGGCATCTGTACGTGGCGACGAAACTGGG
GATTCAGATTTGCGATCAGCCGGGGCGGACGGTGGGGATCATCCGGCGTCCGGGCACGGCGGACGTTTCGAACGTAGTGT
TCGCGGGCGCGGGGTTGCAGACACTGTACGCGACGGCGGGAGATAAGATCTACCGGCGGATACTGCGCCGGAAGGGTGTG
TTCCCGTGGGCGCCTGTGAGGCTGCCGAAGCCGGGATTGTAG

Upstream 100 bases:

>100_bases
GACCTGTTCCTCGGTGGGAGTGCGTTTTTCTTCGGGCTTGGGTTCCATGGCAAGAAGGTAGCACGCAGGGGTCCGCTGTG
GCGGTGTAACATTGCGAATA

Downstream 100 bases:

>100_bases
AAAGCTACCGCTGGAACTTCAGTTCGTCTTTGAAGGCTTCGAGCGAGTTGTAGACGATGGGGCAATAGCAGGCGCGGTCC
ACGAACTCCCACATGCGGCT

Product: gluconolactonase

Products: NA

Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]

Number of amino acids: Translated: 573; Mature: 573

Protein sequence:

>573_residues
MKTLAFLLTAATTLCAQPYTPKGQLTKSVWAKSKIFPGTTRDVQVYVPAQYDGAKAACVMIFQDGNGFASAQGPWHVPAV
MDTLIEQGAMPVTIAIFIEPGVRPAAGADQMARYNRSYEYDGLGDRYARFLIEEILPEVGKQYRLSSDPNDRALAGSSSG
GIASFTAAWERPDAFHRVMSFIGSYTNLRGGDSYIDLIRKMEPKPLRVFLQDGSADQNIYSGWWWLANQGMAKSLEYAGY
DVKFEPGVEGHNSKHGAAIFADAMRWLWRDYPRAIEAGKGGAGQRHYITEFLDPAHDWEVAGEGYQFAEGPAVDREGNVY
FCDAGASRIYKVDGAGKVTVFKENTGGATGLMFGGDGRLYAAENQRKRVVAYAPDGKLSVIATGVTPNDLAVTSKGEVYF
TDTPAQRVYHVDAKGARRVVFQGGADGNLLMPNGVRLTPDEALLVVADTTGRTAWSFHIEADGSLVDGQPFYHLQLPDDV
AQGPVRSGADGMTFDDQGHLYVATKLGIQICDQPGRTVGIIRRPGTADVSNVVFAGAGLQTLYATAGDKIYRRILRRKGV
FPWAPVRLPKPGL

Sequences:

>Translated_573_residues
MKTLAFLLTAATTLCAQPYTPKGQLTKSVWAKSKIFPGTTRDVQVYVPAQYDGAKAACVMIFQDGNGFASAQGPWHVPAV
MDTLIEQGAMPVTIAIFIEPGVRPAAGADQMARYNRSYEYDGLGDRYARFLIEEILPEVGKQYRLSSDPNDRALAGSSSG
GIASFTAAWERPDAFHRVMSFIGSYTNLRGGDSYIDLIRKMEPKPLRVFLQDGSADQNIYSGWWWLANQGMAKSLEYAGY
DVKFEPGVEGHNSKHGAAIFADAMRWLWRDYPRAIEAGKGGAGQRHYITEFLDPAHDWEVAGEGYQFAEGPAVDREGNVY
FCDAGASRIYKVDGAGKVTVFKENTGGATGLMFGGDGRLYAAENQRKRVVAYAPDGKLSVIATGVTPNDLAVTSKGEVYF
TDTPAQRVYHVDAKGARRVVFQGGADGNLLMPNGVRLTPDEALLVVADTTGRTAWSFHIEADGSLVDGQPFYHLQLPDDV
AQGPVRSGADGMTFDDQGHLYVATKLGIQICDQPGRTVGIIRRPGTADVSNVVFAGAGLQTLYATAGDKIYRRILRRKGV
FPWAPVRLPKPGL
>Mature_573_residues
MKTLAFLLTAATTLCAQPYTPKGQLTKSVWAKSKIFPGTTRDVQVYVPAQYDGAKAACVMIFQDGNGFASAQGPWHVPAV
MDTLIEQGAMPVTIAIFIEPGVRPAAGADQMARYNRSYEYDGLGDRYARFLIEEILPEVGKQYRLSSDPNDRALAGSSSG
GIASFTAAWERPDAFHRVMSFIGSYTNLRGGDSYIDLIRKMEPKPLRVFLQDGSADQNIYSGWWWLANQGMAKSLEYAGY
DVKFEPGVEGHNSKHGAAIFADAMRWLWRDYPRAIEAGKGGAGQRHYITEFLDPAHDWEVAGEGYQFAEGPAVDREGNVY
FCDAGASRIYKVDGAGKVTVFKENTGGATGLMFGGDGRLYAAENQRKRVVAYAPDGKLSVIATGVTPNDLAVTSKGEVYF
TDTPAQRVYHVDAKGARRVVFQGGADGNLLMPNGVRLTPDEALLVVADTTGRTAWSFHIEADGSLVDGQPFYHLQLPDDV
AQGPVRSGADGMTFDDQGHLYVATKLGIQICDQPGRTVGIIRRPGTADVSNVVFAGAGLQTLYATAGDKIYRRILRRKGV
FPWAPVRLPKPGL

Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511
- InterPro:   IPR006311 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: =3.1.1.17 [H]

Molecular weight: Translated: 62267; Mature: 62267

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLAFLLTAATTLCAQPYTPKGQLTKSVWAKSKIFPGTTRDVQVYVPAQYDGAKAACVM
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEE
IFQDGNGFASAQGPWHVPAVMDTLIEQGAMPVTIAIFIEPGVRPAAGADQMARYNRSYEY
EEECCCCEECCCCCEECHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCC
DGLGDRYARFLIEEILPEVGKQYRLSSDPNDRALAGSSSGGIASFTAAWERPDAFHRVMS
CCCHHHHHHHHHHHHHHHHCHHEECCCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHH
FIGSYTNLRGGDSYIDLIRKMEPKPLRVFLQDGSADQNIYSGWWWLANQGMAKSLEYAGY
HHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEECCEEEEECCCCHHHHHHCCC
DVKFEPGVEGHNSKHGAAIFADAMRWLWRDYPRAIEAGKGGAGQRHYITEFLDPAHDWEV
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEE
AGEGYQFAEGPAVDREGNVYFCDAGASRIYKVDGAGKVTVFKENTGGATGLMFGGDGRLY
CCCCCEECCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEE
AAENQRKRVVAYAPDGKLSVIATGVTPNDLAVTSKGEVYFTDTPAQRVYHVDAKGARRVV
EECCCCCEEEEECCCCCEEEEEECCCCCCEEEECCCCEEEECCCHHEEEEECCCCCEEEE
FQGGADGNLLMPNGVRLTPDEALLVVADTTGRTAWSFHIEADGSLVDGQPFYHLQLPDDV
EECCCCCCEECCCCCEECCCCEEEEEEECCCCEEEEEEEEECCCEECCCCEEEEECCHHH
AQGPVRSGADGMTFDDQGHLYVATKLGIQICDQPGRTVGIIRRPGTADVSNVVFAGAGLQ
HCCCCCCCCCCCEECCCCCEEEEEECCEEEECCCCCEEEEEECCCCCCCCCEEEECCCHH
TLYATAGDKIYRRILRRKGVFPWAPVRLPKPGL
HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTLAFLLTAATTLCAQPYTPKGQLTKSVWAKSKIFPGTTRDVQVYVPAQYDGAKAACVM
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEE
IFQDGNGFASAQGPWHVPAVMDTLIEQGAMPVTIAIFIEPGVRPAAGADQMARYNRSYEY
EEECCCCEECCCCCEECHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCC
DGLGDRYARFLIEEILPEVGKQYRLSSDPNDRALAGSSSGGIASFTAAWERPDAFHRVMS
CCCHHHHHHHHHHHHHHHHCHHEECCCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHH
FIGSYTNLRGGDSYIDLIRKMEPKPLRVFLQDGSADQNIYSGWWWLANQGMAKSLEYAGY
HHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEECCEEEEECCCCHHHHHHCCC
DVKFEPGVEGHNSKHGAAIFADAMRWLWRDYPRAIEAGKGGAGQRHYITEFLDPAHDWEV
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEE
AGEGYQFAEGPAVDREGNVYFCDAGASRIYKVDGAGKVTVFKENTGGATGLMFGGDGRLY
CCCCCEECCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEE
AAENQRKRVVAYAPDGKLSVIATGVTPNDLAVTSKGEVYFTDTPAQRVYHVDAKGARRVV
EECCCCCEEEEECCCCCEEEEEECCCCCCEEEECCCCEEEECCCHHEEEEECCCCCEEEE
FQGGADGNLLMPNGVRLTPDEALLVVADTTGRTAWSFHIEADGSLVDGQPFYHLQLPDDV
EECCCCCCEECCCCCEECCCCEEEEEEECCCCEEEEEEEEECCCEECCCCEEEEECCHHH
AQGPVRSGADGMTFDDQGHLYVATKLGIQICDQPGRTVGIIRRPGTADVSNVVFAGAGLQ
HCCCCCCCCCCCEECCCCCEEEEEECCEEEECCCCCEEEEEECCCCCCCCCEEEECCCHH
TLYATAGDKIYRRILRRKGVFPWAPVRLPKPGL
HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1482681 [H]