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The map label for this gene is 116622525

Identifier: 116622525

GI number: 116622525

Start: 4329694

End: 4330401

Strand: Direct

Name: 116622525

Synonym: Acid_3423

Alternate gene names: NA

Gene position: 4329694-4330401 (Clockwise)

Preceding gene: 116622524

Following gene: 116622526

Centisome position: 43.45

GC content: 68.22

Gene sequence:

>708_bases
ATGAAGCCCTGGACGCTGCTCGACCACACGGTCACGCCGGACGGAAAGAACATCACGCTGCACGAGCACGACGGCGCGTA
TGCCATCCGGGTGGATGGCAGTCCGCTGATGACGACGCGGCAGCACGCATCGGAAGAGCGGCTGGCGGAATTGGCGTGCG
CGCACGTGCGATCCGCGGCGTCGCCGCGGGTATTGATCGGCGGGCTGGGCTTCGGGTTCACGCTGCGGGCGGCGTTGGGT
GTGCTGCCGGCGGGGGCTGGAATCGTGGTCGCGGAGATCCTGGCGGCGGTGATCGCGTGGAACCGGAATCCGGCGTTTCC
GCTGGCGGCGGATGCGATGGCGGACCGGCGGGTGACGGTTCTTGAACGGGACGTCGGGGAAGTGATCCGCGAGTCGCGGG
GGGAGTTCGATGCGATCGTGCTGGATGTGGATAATGGTCCGGCGGCGATGAGCACGGCGGGGAATGAGCGGCTGTATGAC
TTCGCGGGGCTGGAAAGGACGCGGCGCGCGCTGCGTCCGGCGGGGTGCGCGGCGTTCTGGTCGGCGGCACCGGCTGCGGA
TTTTGCGAAGTTGATGGCGCGGGCGGGGTTCCGGGTGGAGATACAGCGGTCGCGGGCGCGGGGGAATGCGGGGGCGCGAC
ATACGATTTTTCTGGGTTGGGCCGCGGAAAAGCAATATGGGCCGCGGATGAACGCGGAACGCGGATAA

Upstream 100 bases:

>100_bases
AACGATCCCTTTCACGGAGTGCGGGTGGAGAAGGGTAAGTTGATATTGCCGAAGGGCCCGGGGCTCGGGTTGACGCCCGC
CTAACTCCGGGTTTTCCGCG

Downstream 100 bases:

>100_bases
CCCAGGAAGAAACCAAGTACACCGTTTCGGAAGTTCGATTACGTGTCGCGAGATCGCTTGCTGACAGGGCATGCTATCTC
CTTTTCAAACGTGCAGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKPWTLLDHTVTPDGKNITLHEHDGAYAIRVDGSPLMTTRQHASEERLAELACAHVRSAASPRVLIGGLGFGFTLRAALG
VLPAGAGIVVAEILAAVIAWNRNPAFPLAADAMADRRVTVLERDVGEVIRESRGEFDAIVLDVDNGPAAMSTAGNERLYD
FAGLERTRRALRPAGCAAFWSAAPAADFAKLMARAGFRVEIQRSRARGNAGARHTIFLGWAAEKQYGPRMNAERG

Sequences:

>Translated_235_residues
MKPWTLLDHTVTPDGKNITLHEHDGAYAIRVDGSPLMTTRQHASEERLAELACAHVRSAASPRVLIGGLGFGFTLRAALG
VLPAGAGIVVAEILAAVIAWNRNPAFPLAADAMADRRVTVLERDVGEVIRESRGEFDAIVLDVDNGPAAMSTAGNERLYD
FAGLERTRRALRPAGCAAFWSAAPAADFAKLMARAGFRVEIQRSRARGNAGARHTIFLGWAAEKQYGPRMNAERG
>Mature_235_residues
MKPWTLLDHTVTPDGKNITLHEHDGAYAIRVDGSPLMTTRQHASEERLAELACAHVRSAASPRVLIGGLGFGFTLRAALG
VLPAGAGIVVAEILAAVIAWNRNPAFPLAADAMADRRVTVLERDVGEVIRESRGEFDAIVLDVDNGPAAMSTAGNERLYD
FAGLERTRRALRPAGCAAFWSAAPAADFAKLMARAGFRVEIQRSRARGNAGARHTIFLGWAAEKQYGPRMNAERG

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25253; Mature: 25253

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPWTLLDHTVTPDGKNITLHEHDGAYAIRVDGSPLMTTRQHASEERLAELACAHVRSAA
CCCCEEECCEECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
SPRVLIGGLGFGFTLRAALGVLPAGAGIVVAEILAAVIAWNRNPAFPLAADAMADRRVTV
CCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHH
LERDVGEVIRESRGEFDAIVLDVDNGPAAMSTAGNERLYDFAGLERTRRALRPAGCAAFW
HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
SAAPAADFAKLMARAGFRVEIQRSRARGNAGARHTIFLGWAAEKQYGPRMNAERG
CCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKPWTLLDHTVTPDGKNITLHEHDGAYAIRVDGSPLMTTRQHASEERLAELACAHVRSAA
CCCCEEECCEECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
SPRVLIGGLGFGFTLRAALGVLPAGAGIVVAEILAAVIAWNRNPAFPLAADAMADRRVTV
CCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHH
LERDVGEVIRESRGEFDAIVLDVDNGPAAMSTAGNERLYDFAGLERTRRALRPAGCAAFW
HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
SAAPAADFAKLMARAGFRVEIQRSRARGNAGARHTIFLGWAAEKQYGPRMNAERG
CCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA