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The map label for this gene is yihM [C]

Identifier: 116622388

GI number: 116622388

Start: 4154713

End: 4155729

Strand: Direct

Name: yihM [C]

Synonym: Acid_3282

Alternate gene names: 116622388

Gene position: 4154713-4155729 (Clockwise)

Preceding gene: 116622387

Following gene: 116622389

Centisome position: 41.69

GC content: 65.09

Gene sequence:

>1017_bases
ATGATCGACCGTTTCCCGCTGGGCTACAACACGTACTCGATTCGCGCGCTGAAGTGGCACGACCTGCCCCTGATCGATTA
CGCGGCGCAATTGAAACTGGACGCGATCTTCCTGCAGGATTCGATCGACCCGGGAATCAACGATCCGGCTCACTGGAAGG
AAGTCAAGGAGGCGGCCAAACGGCACGGCCTGTGGCTGGGGACCGGCGGCAGCGCCGTGCTGCCGCGCTCGGACGAGAGC
GCGGAGTTCGACCGGTCAGTGAAGGCGCTGCGCGACGGCGTGAAGCGTGCCGTAGGTATGGGCTCGCCGCTGGTGCGCAT
GCTGCTGGCGGGCGATCGCGACCACCTGCCGCCGGGTCCCGTGGAGAAGCATATCGCCATCATGATCAAGGTGCTGCGCG
TGGTGCGCACGGAGGCGATGGACGCGGGCGTGAAGTTCGCCGTGGAGAATCACAAGGAACTGCTGTGCTGGCAGACGCGG
CAGGTGATCGACGGCGCGGGCAAGGAGTTCGTCGGGTCGTACCTGGACACGGGCAATCCGGTGTTCGTGATGGAAGATCC
GATGCAGACGGTGGAGACCCTGGGTCCAGTGGCGGTGATGCTGCACCTGCGCGATTCGGTGGTCTACGAGACGCGCGGCG
GAATCGCGGTGCAGTGGGTGCCGCTCGGCGAAGGCGTGGTCGATTTCAAGGCGATCCTCGCCAAGGCGAAGGAGATCTGC
CCGCCGATCGCGGTCTTCAACAAGCCGATCACGGGGCGTCCGCCGGCGATCCAGCCGGTGTGGGACAAGGAGTTCATGAA
GAAGTTCGCCGATGTGCGGGCCGCGGATTTCGCGCGCTTCCTGGCGCTGGCGAAAAAAGGCGGGCCTTACGAGCGTCACA
TGGTCATCGAGGACGTGCCGGGCAAGACGCCGGAAGCGCTCGCCGCCGCGCTCACGTACCAGCAGAAGGAGCACATGGAG
CGCGGCGTGGAATATGCGAAGAAGGTGCTGGATCTCGGCCTGAGGTGGCGGGGGTAA

Upstream 100 bases:

>100_bases
GCGGCATGCGTTTCGTGGGCGTGGCGGCGGAGCACGTCTTCCTGATGGAGAAGTGCAAGGAAGCCATGGCGGCGCTGCGC
CCGGCTAAGGCGGCGAAATC

Downstream 100 bases:

>100_bases
GGAAATATGTTCACTCCGACTCAAGAAGATGTCGATCGCGATTGCCGCTTGCGGGCGGCCAGCAGGGCGCTGAACAGCAA
GTTGGTGAAAACCATTCCGC

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase Domain Protein

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MIDRFPLGYNTYSIRALKWHDLPLIDYAAQLKLDAIFLQDSIDPGINDPAHWKEVKEAAKRHGLWLGTGGSAVLPRSDES
AEFDRSVKALRDGVKRAVGMGSPLVRMLLAGDRDHLPPGPVEKHIAIMIKVLRVVRTEAMDAGVKFAVENHKELLCWQTR
QVIDGAGKEFVGSYLDTGNPVFVMEDPMQTVETLGPVAVMLHLRDSVVYETRGGIAVQWVPLGEGVVDFKAILAKAKEIC
PPIAVFNKPITGRPPAIQPVWDKEFMKKFADVRAADFARFLALAKKGGPYERHMVIEDVPGKTPEALAAALTYQQKEHME
RGVEYAKKVLDLGLRWRG

Sequences:

>Translated_338_residues
MIDRFPLGYNTYSIRALKWHDLPLIDYAAQLKLDAIFLQDSIDPGINDPAHWKEVKEAAKRHGLWLGTGGSAVLPRSDES
AEFDRSVKALRDGVKRAVGMGSPLVRMLLAGDRDHLPPGPVEKHIAIMIKVLRVVRTEAMDAGVKFAVENHKELLCWQTR
QVIDGAGKEFVGSYLDTGNPVFVMEDPMQTVETLGPVAVMLHLRDSVVYETRGGIAVQWVPLGEGVVDFKAILAKAKEIC
PPIAVFNKPITGRPPAIQPVWDKEFMKKFADVRAADFARFLALAKKGGPYERHMVIEDVPGKTPEALAAALTYQQKEHME
RGVEYAKKVLDLGLRWRG
>Mature_338_residues
MIDRFPLGYNTYSIRALKWHDLPLIDYAAQLKLDAIFLQDSIDPGINDPAHWKEVKEAAKRHGLWLGTGGSAVLPRSDES
AEFDRSVKALRDGVKRAVGMGSPLVRMLLAGDRDHLPPGPVEKHIAIMIKVLRVVRTEAMDAGVKFAVENHKELLCWQTR
QVIDGAGKEFVGSYLDTGNPVFVMEDPMQTVETLGPVAVMLHLRDSVVYETRGGIAVQWVPLGEGVVDFKAILAKAKEIC
PPIAVFNKPITGRPPAIQPVWDKEFMKKFADVRAADFARFLALAKKGGPYERHMVIEDVPGKTPEALAAALTYQQKEHME
RGVEYAKKVLDLGLRWRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37565; Mature: 37565

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRFPLGYNTYSIRALKWHDLPLIDYAAQLKLDAIFLQDSIDPGINDPAHWKEVKEAAK
CCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHH
RHGLWLGTGGSAVLPRSDESAEFDRSVKALRDGVKRAVGMGSPLVRMLLAGDRDHLPPGP
HCCEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC
VEKHIAIMIKVLRVVRTEAMDAGVKFAVENHKELLCWQTRQVIDGAGKEFVGSYLDTGNP
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
VFVMEDPMQTVETLGPVAVMLHLRDSVVYETRGGIAVQWVPLGEGVVDFKAILAKAKEIC
EEEECCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHC
PPIAVFNKPITGRPPAIQPVWDKEFMKKFADVRAADFARFLALAKKGGPYERHMVIEDVP
CCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCC
GKTPEALAAALTYQQKEHMERGVEYAKKVLDLGLRWRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIDRFPLGYNTYSIRALKWHDLPLIDYAAQLKLDAIFLQDSIDPGINDPAHWKEVKEAAK
CCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHH
RHGLWLGTGGSAVLPRSDESAEFDRSVKALRDGVKRAVGMGSPLVRMLLAGDRDHLPPGP
HCCEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC
VEKHIAIMIKVLRVVRTEAMDAGVKFAVENHKELLCWQTRQVIDGAGKEFVGSYLDTGNP
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
VFVMEDPMQTVETLGPVAVMLHLRDSVVYETRGGIAVQWVPLGEGVVDFKAILAKAKEIC
EEEECCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHC
PPIAVFNKPITGRPPAIQPVWDKEFMKKFADVRAADFARFLALAKKGGPYERHMVIEDVP
CCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCC
GKTPEALAAALTYQQKEHMERGVEYAKKVLDLGLRWRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA