| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621938
Identifier: 116621938
GI number: 116621938
Start: 3577407
End: 3579614
Strand: Direct
Name: 116621938
Synonym: Acid_2823
Alternate gene names: NA
Gene position: 3577407-3579614 (Clockwise)
Preceding gene: 116621937
Following gene: 116621939
Centisome position: 35.9
GC content: 60.6
Gene sequence:
>2208_bases ATGCCCTCTGAGACGGAGCGATCTTCCACTGCGAAAGTGGTGGTCGCCACCACCGTAGCACTTTCTTTCATTTCGTTTTG GCGCGCCGCCGCCATCGTCTTGAGCGATTTAGCGTCCTCGGCCTTTTACGCCGGCGGCATCGCCGAGCACGCCATCGGCA AGAGCGCCCCGTGGTTCATCCTCGGCGTCATGCTGTTCAGCTTCGCGGTCCGCTCGGTCTACATGGAGTCGAGCGGCATG TTCGTGCGCGGCGGCGTGTACGTCGTGGTCCGCGATGCCATGGGACCCTTCGTCGCGCGCCTTTCGGTTTCCTCCCTGAT CTTCGACTACATCCTCACCGGGCCCATCAGTGTGGTCAGCGCCGGTCAATATCTGGGCCACCTGGTCAATGAACTCTCCG AGCTCAACCACCTGTCGGTTCACCTGGATCCCAACACCTTCGCAGCGGGTTTCGGTGTTCTGGTCACCATCTACTTCTGG TGGAGCAATACCAAGGGCATCCACGAATCCAGCGGGAAAGCGCTGCGCATCATGCAGATCACCACTGTGATGGTGGTCGC CTTCCTGATATGGTGCCCGATCACGCTGCTGCTGGCCCCGAAAGTCACTTTGCCTCCAGCTCCGATTCCCGCCAATCTCC ACTTCGCGCCCGAGGCGCTTGGCTGGCTGCAGGGCACCATCTTCCCGCAAATCGCCGCGATCGCCATGATCGTCGCCTTC GGGCACTCCCTGCTCTCGATGAGCGGCTTCGAGACCCTGGCGCAGGTCTATCGCGAGATCGCATACCCCAAACTGAAGAA TCTGCGCTACACCGGCAATTTGGTCTGCATGTACTCGGTGGTCTGCACCGGCGTCATCACCCTGTTCGCAGGCATGATCA TCCCGGACGACAAGCGCTCGCAATACGTGGACAACCTCCTGGGCGGCCTGGCTATGCACTTGGCCGGGCCGGAGATCCTG CGCCTCGGCTTCCATATCTTCGTGGTCATCGTAGGTGTGCTGATACTATCCGGCGCGGTCAATACCTCCATGATCGGCGC CAACGGCGTGATGAACCGCATCGCCGAAGACGGTGTGCTGCTCGATTGGTTCCGCAAGCCGCAGAAGCGCTTCGGCACCA CCTACCGCATCATCAATCTCATCGCCGCCCTCCAAATCGCCACCATCGTGTTGAGCCGCGGCGACGTCTACCTGCTCGGT GAAGCCTACGCATTCGGCGTGGTCTGGAGCTTCTTCCTGAAATCGCTCGGCGTGCTCGTGCTCCGCTACCACCGCCACGA TCAGGAATACAAGATGCCGCTCAATCCGCGCATCTTCGGGCGCGAATGGCCGGTCGGCCTCGCCCTCACGACGCTACTGC TTTTCTTCGTCGCCATCGCCAATCTTTTCACGAAGGAAATCGCCACCAAGAGCGGCGTTGCATTTACCATCGTCCTGTTT ATCATCTTCACGATCTCCGAACGCATTAATGCCCGCAAACGCGCCGACAAGAAGCACGGTCTCGAAGAGTTCAATCTGGA TATGCGGCCGGAGATCACCACCGAAACCGTGCACGCCCGCCCCGGTTGCGTGCTGGTGGCGGTGCGCGATTACCATCGCA TGCTCCATCTTCACAACGTGCTCGAGAAGACCAACCTGCGCCGCCACGATATCGTGGTGATGACGGTGCGTCCCGTGTCT TCCGGCGCGGCGGAATACGAGCTCTCGGACCAGCAGCTCTTCAGCGAGTACGAAAAAGAACTGCTCTCGGCCGTGGTGAC AATGGCGGAAAAAGCCGGGAAAACAGTCGATCTGCTGGTGGTGCCGGGCGTGGATCCCTTCGATGCGATGGTGCAAACCG CATCCAAACTCAAGGCCTCGCGCCTGGTGACGGGCGTCTCGCCGAAAATGGATTCGGATGAGTTGGCGCGTCGCATCGGC CTGGCGTGGGAAAAAGTGCCCGAGCCCCGGCATCCTTTTTCGCTCGAAATTATCACGCCCGACAGGCCCTCGGTTTACGT CAACCTGGGACCGCATCCCCCGCGGCTCTGGCCCGAAGATCTGGACCGCGCCCACGATATCTGGCTGCGCCTGCAGGACA ACTTCGGCTCGCGCCTGCATCATCGCGATGTGGTCGGCGTCGCCCTGCGCCGTTTGCAAAAAGATCTGGAAGGCGAGCGG CGCGACCAGGCGCTCGAAGATCTCAATAGAGAACTGCGAAAACCCTAA
Upstream 100 bases:
>100_bases TGGTCAGCCCGCTCGCATTTTCTCAGATCCGCTGAACCTGAAGTACGGTACCGCGCTATTGTAGAATACAGGCTGTCTGT AATACGTGACTGGGAAACGC
Downstream 100 bases:
>100_bases TCGCCCTCGATGGTGGCAGCGCCATTTGGCGCTATTCCGGTGCTCAGGCTACAAACTTTGTAGAAAAAGACTACTGCATC CTGTTGCGTGATGTGGTGCA
Product: amino acid transporter
Products: NA
Alternate protein names: Amino Acid Transporter; Amino Acid Permease Family Protein; Amino Acid Permease-Associated Region
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MPSETERSSTAKVVVATTVALSFISFWRAAAIVLSDLASSAFYAGGIAEHAIGKSAPWFILGVMLFSFAVRSVYMESSGM FVRGGVYVVVRDAMGPFVARLSVSSLIFDYILTGPISVVSAGQYLGHLVNELSELNHLSVHLDPNTFAAGFGVLVTIYFW WSNTKGIHESSGKALRIMQITTVMVVAFLIWCPITLLLAPKVTLPPAPIPANLHFAPEALGWLQGTIFPQIAAIAMIVAF GHSLLSMSGFETLAQVYREIAYPKLKNLRYTGNLVCMYSVVCTGVITLFAGMIIPDDKRSQYVDNLLGGLAMHLAGPEIL RLGFHIFVVIVGVLILSGAVNTSMIGANGVMNRIAEDGVLLDWFRKPQKRFGTTYRIINLIAALQIATIVLSRGDVYLLG EAYAFGVVWSFFLKSLGVLVLRYHRHDQEYKMPLNPRIFGREWPVGLALTTLLLFFVAIANLFTKEIATKSGVAFTIVLF IIFTISERINARKRADKKHGLEEFNLDMRPEITTETVHARPGCVLVAVRDYHRMLHLHNVLEKTNLRRHDIVVMTVRPVS SGAAEYELSDQQLFSEYEKELLSAVVTMAEKAGKTVDLLVVPGVDPFDAMVQTASKLKASRLVTGVSPKMDSDELARRIG LAWEKVPEPRHPFSLEIITPDRPSVYVNLGPHPPRLWPEDLDRAHDIWLRLQDNFGSRLHHRDVVGVALRRLQKDLEGER RDQALEDLNRELRKP
Sequences:
>Translated_735_residues MPSETERSSTAKVVVATTVALSFISFWRAAAIVLSDLASSAFYAGGIAEHAIGKSAPWFILGVMLFSFAVRSVYMESSGM FVRGGVYVVVRDAMGPFVARLSVSSLIFDYILTGPISVVSAGQYLGHLVNELSELNHLSVHLDPNTFAAGFGVLVTIYFW WSNTKGIHESSGKALRIMQITTVMVVAFLIWCPITLLLAPKVTLPPAPIPANLHFAPEALGWLQGTIFPQIAAIAMIVAF GHSLLSMSGFETLAQVYREIAYPKLKNLRYTGNLVCMYSVVCTGVITLFAGMIIPDDKRSQYVDNLLGGLAMHLAGPEIL RLGFHIFVVIVGVLILSGAVNTSMIGANGVMNRIAEDGVLLDWFRKPQKRFGTTYRIINLIAALQIATIVLSRGDVYLLG EAYAFGVVWSFFLKSLGVLVLRYHRHDQEYKMPLNPRIFGREWPVGLALTTLLLFFVAIANLFTKEIATKSGVAFTIVLF IIFTISERINARKRADKKHGLEEFNLDMRPEITTETVHARPGCVLVAVRDYHRMLHLHNVLEKTNLRRHDIVVMTVRPVS SGAAEYELSDQQLFSEYEKELLSAVVTMAEKAGKTVDLLVVPGVDPFDAMVQTASKLKASRLVTGVSPKMDSDELARRIG LAWEKVPEPRHPFSLEIITPDRPSVYVNLGPHPPRLWPEDLDRAHDIWLRLQDNFGSRLHHRDVVGVALRRLQKDLEGER RDQALEDLNRELRKP >Mature_734_residues PSETERSSTAKVVVATTVALSFISFWRAAAIVLSDLASSAFYAGGIAEHAIGKSAPWFILGVMLFSFAVRSVYMESSGMF VRGGVYVVVRDAMGPFVARLSVSSLIFDYILTGPISVVSAGQYLGHLVNELSELNHLSVHLDPNTFAAGFGVLVTIYFWW SNTKGIHESSGKALRIMQITTVMVVAFLIWCPITLLLAPKVTLPPAPIPANLHFAPEALGWLQGTIFPQIAAIAMIVAFG HSLLSMSGFETLAQVYREIAYPKLKNLRYTGNLVCMYSVVCTGVITLFAGMIIPDDKRSQYVDNLLGGLAMHLAGPEILR LGFHIFVVIVGVLILSGAVNTSMIGANGVMNRIAEDGVLLDWFRKPQKRFGTTYRIINLIAALQIATIVLSRGDVYLLGE AYAFGVVWSFFLKSLGVLVLRYHRHDQEYKMPLNPRIFGREWPVGLALTTLLLFFVAIANLFTKEIATKSGVAFTIVLFI IFTISERINARKRADKKHGLEEFNLDMRPEITTETVHARPGCVLVAVRDYHRMLHLHNVLEKTNLRRHDIVVMTVRPVSS GAAEYELSDQQLFSEYEKELLSAVVTMAEKAGKTVDLLVVPGVDPFDAMVQTASKLKASRLVTGVSPKMDSDELARRIGL AWEKVPEPRHPFSLEIITPDRPSVYVNLGPHPPRLWPEDLDRAHDIWLRLQDNFGSRLHHRDVVGVALRRLQKDLEGERR DQALEDLNRELRKP
Specific function: Unknown
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81699; Mature: 81567
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSETERSSTAKVVVATTVALSFISFWRAAAIVLSDLASSAFYAGGIAEHAIGKSAPWFI CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHH LGVMLFSFAVRSVYMESSGMFVRGGVYVVVRDAMGPFVARLSVSSLIFDYILTGPISVVS HHHHHHHHHHHHHHHCCCCCEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHH AGQYLGHLVNELSELNHLSVHLDPNTFAAGFGVLVTIYFWWSNTKGIHESSGKALRIMQI HHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEHHHH TTVMVVAFLIWCPITLLLAPKVTLPPAPIPANLHFAPEALGWLQGTIFPQIAAIAMIVAF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GHSLLSMSGFETLAQVYREIAYPKLKNLRYTGNLVCMYSVVCTGVITLFAGMIIPDDKRS HHHHHHHHHHHHHHHHHHHHCCCHHHCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHH QYVDNLLGGLAMHLAGPEILRLGFHIFVVIVGVLILSGAVNTSMIGANGVMNRIAEDGVL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCEE LDWFRKPQKRFGTTYRIINLIAALQIATIVLSRGDVYLLGEAYAFGVVWSFFLKSLGVLV HHHHHCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH LRYHRHDQEYKMPLNPRIFGREWPVGLALTTLLLFFVAIANLFTKEIATKSGVAFTIVLF HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IIFTISERINARKRADKKHGLEEFNLDMRPEITTETVHARPGCVLVAVRDYHRMLHLHNV HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHHHH LEKTNLRRHDIVVMTVRPVSSGAAEYELSDQQLFSEYEKELLSAVVTMAEKAGKTVDLLV HHHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE VPGVDPFDAMVQTASKLKASRLVTGVSPKMDSDELARRIGLAWEKVPEPRHPFSLEIITP ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHCCCCCCCEEEEEECC DRPSVYVNLGPHPPRLWPEDLDRAHDIWLRLQDNFGSRLHHRDVVGVALRRLQKDLEGER CCCEEEEECCCCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCH RDQALEDLNRELRKP HHHHHHHHHHHHCCC >Mature Secondary Structure PSETERSSTAKVVVATTVALSFISFWRAAAIVLSDLASSAFYAGGIAEHAIGKSAPWFI CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHH LGVMLFSFAVRSVYMESSGMFVRGGVYVVVRDAMGPFVARLSVSSLIFDYILTGPISVVS HHHHHHHHHHHHHHHCCCCCEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHH AGQYLGHLVNELSELNHLSVHLDPNTFAAGFGVLVTIYFWWSNTKGIHESSGKALRIMQI HHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEHHHH TTVMVVAFLIWCPITLLLAPKVTLPPAPIPANLHFAPEALGWLQGTIFPQIAAIAMIVAF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GHSLLSMSGFETLAQVYREIAYPKLKNLRYTGNLVCMYSVVCTGVITLFAGMIIPDDKRS HHHHHHHHHHHHHHHHHHHHCCCHHHCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHH QYVDNLLGGLAMHLAGPEILRLGFHIFVVIVGVLILSGAVNTSMIGANGVMNRIAEDGVL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCEE LDWFRKPQKRFGTTYRIINLIAALQIATIVLSRGDVYLLGEAYAFGVVWSFFLKSLGVLV HHHHHCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH LRYHRHDQEYKMPLNPRIFGREWPVGLALTTLLLFFVAIANLFTKEIATKSGVAFTIVLF HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IIFTISERINARKRADKKHGLEEFNLDMRPEITTETVHARPGCVLVAVRDYHRMLHLHNV HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHHHH LEKTNLRRHDIVVMTVRPVSSGAAEYELSDQQLFSEYEKELLSAVVTMAEKAGKTVDLLV HHHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE VPGVDPFDAMVQTASKLKASRLVTGVSPKMDSDELARRIGLAWEKVPEPRHPFSLEIITP ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHCCCCCCCEEEEEECC DRPSVYVNLGPHPPRLWPEDLDRAHDIWLRLQDNFGSRLHHRDVVGVALRRLQKDLEGER CCCEEEEECCCCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCH RDQALEDLNRELRKP HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA