Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116621936

Identifier: 116621936

GI number: 116621936

Start: 3575725

End: 3576507

Strand: Direct

Name: 116621936

Synonym: Acid_2821

Alternate gene names: NA

Gene position: 3575725-3576507 (Clockwise)

Preceding gene: 116621930

Following gene: 116621937

Centisome position: 35.88

GC content: 62.2

Gene sequence:

>783_bases
GTGCCCTCCGTCCATCAAGATGGATCCCGCGCGCGTCATCGTCGAGTGCGCGACCTCCGCACTCTGATCGGATATGCCTT
CGGATCCTCTCCCGGGCGGATCCAGGGACCCTCATGGCTCCTTGACGGGGGCGCCACCCGATTTCATATCGTCGCGAAAT
TTCTTCCCGGAGAGCCACTCGATTTTGTTCCCGAGATGTTCCAAACCCTGCTGGCGGAACGCTTCCAGCTCGCGCTCCAC
CGCGCCGCCAACTCGCAGGAGGTCTATGCGCTGTTGGCCCCGAATGGCGGGTTTATGCTGAGGCCCGCCGGACCCCCGGT
GACGGACCCCGGGGCGCCGTCCGATGCCCTCGACTTCTTCGGCGACGTACGGACTCGAACCACTCCTAATCCGGATGGCA
CTGGTTCTACCACCCGGATCGCCAATCCTCGCATGGGGACGGTTCTGGAAACTGAAGGCCGCAACCGGACCCGGCAATGG
CACGCTCTCAGCATCAGCTTGGAAGGCCTCGCCGATCTGCTCGACAAGGTCGCCCCTTTGTCACTGGCGGTAATCGACAC
GACGGGATTGAATGGGCGCTACGAACTAATCCTCGAAGTAGCCCCACACCGAATGACTCCGGGAGCCGACATGCAGGCAG
AAGTCCTGGACGCATTTAACCAGGGATTGCGCAGACTGGGGTTGCGCCTGGAGCGCCGTACGGCCCTGTTCGAAACGCTC
TTTCTAGATCGCGCGGAAAAGACCCCCCACGTTCAACTAGCCGTGCCTGAAAGGGCGACCTGA

Upstream 100 bases:

>100_bases
CCGGCATGAGACCCGCATTTTGGACGCTCTTTGCCTTGACGCTTGCCCCGGCGCGCTTTGAAGGCGCTTCTGTGCGGCTC
TCCCCCTGGTATGACGGAGT

Downstream 100 bases:

>100_bases
TTCCGTCAAGGTATGCCGCGTCCGCCGCGCGCAGTCTGGTACGATGCTCTTGCTATGACCAGACGGGCATTTCTTCCTGC
CGCGGCCGCAGGTGTTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MPSVHQDGSRARHRRVRDLRTLIGYAFGSSPGRIQGPSWLLDGGATRFHIVAKFLPGEPLDFVPEMFQTLLAERFQLALH
RAANSQEVYALLAPNGGFMLRPAGPPVTDPGAPSDALDFFGDVRTRTTPNPDGTGSTTRIANPRMGTVLETEGRNRTRQW
HALSISLEGLADLLDKVAPLSLAVIDTTGLNGRYELILEVAPHRMTPGADMQAEVLDAFNQGLRRLGLRLERRTALFETL
FLDRAEKTPHVQLAVPERAT

Sequences:

>Translated_260_residues
MPSVHQDGSRARHRRVRDLRTLIGYAFGSSPGRIQGPSWLLDGGATRFHIVAKFLPGEPLDFVPEMFQTLLAERFQLALH
RAANSQEVYALLAPNGGFMLRPAGPPVTDPGAPSDALDFFGDVRTRTTPNPDGTGSTTRIANPRMGTVLETEGRNRTRQW
HALSISLEGLADLLDKVAPLSLAVIDTTGLNGRYELILEVAPHRMTPGADMQAEVLDAFNQGLRRLGLRLERRTALFETL
FLDRAEKTPHVQLAVPERAT
>Mature_259_residues
PSVHQDGSRARHRRVRDLRTLIGYAFGSSPGRIQGPSWLLDGGATRFHIVAKFLPGEPLDFVPEMFQTLLAERFQLALHR
AANSQEVYALLAPNGGFMLRPAGPPVTDPGAPSDALDFFGDVRTRTTPNPDGTGSTTRIANPRMGTVLETEGRNRTRQWH
ALSISLEGLADLLDKVAPLSLAVIDTTGLNGRYELILEVAPHRMTPGADMQAEVLDAFNQGLRRLGLRLERRTALFETLF
LDRAEKTPHVQLAVPERAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28591; Mature: 28460

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVHQDGSRARHRRVRDLRTLIGYAFGSSPGRIQGPSWLLDGGATRFHIVAKFLPGEPL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCH
DFVPEMFQTLLAERFQLALHRAANSQEVYALLAPNGGFMLRPAGPPVTDPGAPSDALDFF
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHH
GDVRTRTTPNPDGTGSTTRIANPRMGTVLETEGRNRTRQWHALSISLEGLADLLDKVAPL
HCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCEEEEEEEEHHHHHHHHHHHCCC
SLAVIDTTGLNGRYELILEVAPHRMTPGADMQAEVLDAFNQGLRRLGLRLERRTALFETL
EEEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
FLDRAEKTPHVQLAVPERAT
HHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure 
PSVHQDGSRARHRRVRDLRTLIGYAFGSSPGRIQGPSWLLDGGATRFHIVAKFLPGEPL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCH
DFVPEMFQTLLAERFQLALHRAANSQEVYALLAPNGGFMLRPAGPPVTDPGAPSDALDFF
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHH
GDVRTRTTPNPDGTGSTTRIANPRMGTVLETEGRNRTRQWHALSISLEGLADLLDKVAPL
HCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCEEEEEEEEHHHHHHHHHHHCCC
SLAVIDTTGLNGRYELILEVAPHRMTPGADMQAEVLDAFNQGLRRLGLRLERRTALFETL
EEEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
FLDRAEKTPHVQLAVPERAT
HHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA