| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621923
Identifier: 116621923
GI number: 116621923
Start: 3558959
End: 3560494
Strand: Direct
Name: 116621923
Synonym: Acid_2808
Alternate gene names: NA
Gene position: 3558959-3560494 (Clockwise)
Preceding gene: 116621916
Following gene: 116621927
Centisome position: 35.71
GC content: 56.38
Gene sequence:
>1536_bases ATGACGAGGCTAACGACGATAAGAGAGCTCGGAGTTCTCATGATGCTTGCAGGTGCGATTGTTGTCCCGGCTCAAACGCA TGCCCCCCTGCAGTACCACGGCGGTCCGGTCCTAGGAACATTTACGATTTATCCCCTGTACTACGGCAATTGGAGCAATG CAGATATTGTGGCCCAGCAGAACTACCTGGGTGGCCTGACTGGCTACATCTCAGGCCAAAATGCACTCAATAACCAACAG CCGATGATGAAGCAATACGGTGTGAAGACAGCGAGTGTGGCTCCGGCCAGCGCAGCGAGCCCGACTGCTCTGCCTGCAAA ACTGAGTCGTGCACAGGTGTTGGACATCATTCACGTAAATCAAACGAACGGAAACCTTCCACCTTATAGCGGCTCAGCCC TGCTAATGGTGTTCCTGGCGCACGGCTTCAGCGTGGACGTCACCGGAGGCTGTGCTTATCACGGCAGTGTTTCGCCGTCA TCCTCCTATTTTGCCGCGGTGCCGTTGGATTGTGGACCTCTCTTCCTGGTGACGGCCCATGAGGTATTCGAGGCTTCAGC AGATCCCGATATCGCTAACGCTCCCGGCTGGGATGAGGCGGTGGACTCCTGCACTACAACTGTATTGCTGCCGGTGCCGG GTCTCTCCCTGCCTGGGTACCCATCCAATACGCTCCCCATCCCTGGTGCCGCGGATAATACACAAAGCGGAACCTGCTCG ACGACCGGTTACACTCACCTCGTGTCGTGGGAGCCTTGCGGAAAGGATGATTGCGGTATCAGCACTACACCAGTCGATGC TAATACGACCCGGATCGAACTCGCCAAGCCAGTCGTCACGCAAGCATCTTTCCCTTACAATTCAATCGTATTCATGTCTG GAGATCAGATTGCGATCGGCGCCAGGGGCTGCGTTCAGACCGGCGGTTCAGGCCTGACCTGGAAGCGATACGTGGACCCG AGCGGACCCAATAGCGATCGGCTGTATTTCGGCAGCATGGAGGTTCCCGGTGTCCTCATGCCGATGCGCTTCTCCAACAT CAATGGGCTGACGATAAAGGTGCCCAGCGCGGAGCCGCCGGCCAAATTAGTCCTATACTATTCGGACGACGGGTATGGCG ACAATGGATACTACGCCCACGATAATGGAACGGAGAGCCAATGCTTCTGTCCGTCCCTGGACGCCACTAACTGTGGAGTC GGAACCCCTGGCGGACCTGCCCTTGTCACCCTGACGATTACGCGTAACGTATCGTCGCCCCTGACAATTGGAACGATTTC CCTTTCCGATGGAAAGGTCGGCGCGGCGTATTCCCAATCGCTCACAGTGAACGGTGGGACGGCACCGTTTACATGGCAGC TAATCCTGGGCAGACTGCCGTTTGGTCTAGTGCTGAACACTGCTACTGGACAGATCAGCGGAGCGCCAATCAATGCCGTG GCCGGCAGTTTCCTAACTTTCAAAGTAACCGACTCCAGTTCGCCAATGCAGACTGCTACCGTCAGCTTTCCAATAACGAT TGCGCCGGCCAACTAG
Upstream 100 bases:
>100_bases CAGAAGCTATATGGGCGCCCAGGTGTGTGGCCAAACCTGACGAAAAGGAACGGCCGCATGGCCCCCTAAAACTGAATCGC AGCGTGGAGGTTACTCGGTT
Downstream 100 bases:
>100_bases ACACCGGCCGCTGGCAGCCGCGGTTAACGGACTGGCCGCCGTCGGCGCCATTCGAAGAGGACTACGCCGGCAGCGACGGA GACGTTGAGCGATGAGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MTRLTTIRELGVLMMLAGAIVVPAQTHAPLQYHGGPVLGTFTIYPLYYGNWSNADIVAQQNYLGGLTGYISGQNALNNQQ PMMKQYGVKTASVAPASAASPTALPAKLSRAQVLDIIHVNQTNGNLPPYSGSALLMVFLAHGFSVDVTGGCAYHGSVSPS SSYFAAVPLDCGPLFLVTAHEVFEASADPDIANAPGWDEAVDSCTTTVLLPVPGLSLPGYPSNTLPIPGAADNTQSGTCS TTGYTHLVSWEPCGKDDCGISTTPVDANTTRIELAKPVVTQASFPYNSIVFMSGDQIAIGARGCVQTGGSGLTWKRYVDP SGPNSDRLYFGSMEVPGVLMPMRFSNINGLTIKVPSAEPPAKLVLYYSDDGYGDNGYYAHDNGTESQCFCPSLDATNCGV GTPGGPALVTLTITRNVSSPLTIGTISLSDGKVGAAYSQSLTVNGGTAPFTWQLILGRLPFGLVLNTATGQISGAPINAV AGSFLTFKVTDSSSPMQTATVSFPITIAPAN
Sequences:
>Translated_511_residues MTRLTTIRELGVLMMLAGAIVVPAQTHAPLQYHGGPVLGTFTIYPLYYGNWSNADIVAQQNYLGGLTGYISGQNALNNQQ PMMKQYGVKTASVAPASAASPTALPAKLSRAQVLDIIHVNQTNGNLPPYSGSALLMVFLAHGFSVDVTGGCAYHGSVSPS SSYFAAVPLDCGPLFLVTAHEVFEASADPDIANAPGWDEAVDSCTTTVLLPVPGLSLPGYPSNTLPIPGAADNTQSGTCS TTGYTHLVSWEPCGKDDCGISTTPVDANTTRIELAKPVVTQASFPYNSIVFMSGDQIAIGARGCVQTGGSGLTWKRYVDP SGPNSDRLYFGSMEVPGVLMPMRFSNINGLTIKVPSAEPPAKLVLYYSDDGYGDNGYYAHDNGTESQCFCPSLDATNCGV GTPGGPALVTLTITRNVSSPLTIGTISLSDGKVGAAYSQSLTVNGGTAPFTWQLILGRLPFGLVLNTATGQISGAPINAV AGSFLTFKVTDSSSPMQTATVSFPITIAPAN >Mature_510_residues TRLTTIRELGVLMMLAGAIVVPAQTHAPLQYHGGPVLGTFTIYPLYYGNWSNADIVAQQNYLGGLTGYISGQNALNNQQP MMKQYGVKTASVAPASAASPTALPAKLSRAQVLDIIHVNQTNGNLPPYSGSALLMVFLAHGFSVDVTGGCAYHGSVSPSS SYFAAVPLDCGPLFLVTAHEVFEASADPDIANAPGWDEAVDSCTTTVLLPVPGLSLPGYPSNTLPIPGAADNTQSGTCST TGYTHLVSWEPCGKDDCGISTTPVDANTTRIELAKPVVTQASFPYNSIVFMSGDQIAIGARGCVQTGGSGLTWKRYVDPS GPNSDRLYFGSMEVPGVLMPMRFSNINGLTIKVPSAEPPAKLVLYYSDDGYGDNGYYAHDNGTESQCFCPSLDATNCGVG TPGGPALVTLTITRNVSSPLTIGTISLSDGKVGAAYSQSLTVNGGTAPFTWQLILGRLPFGLVLNTATGQISGAPINAVA GSFLTFKVTDSSSPMQTATVSFPITIAPAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53131; Mature: 52999
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLTTIRELGVLMMLAGAIVVPAQTHAPLQYHGGPVLGTFTIYPLYYGNWSNADIVAQQ CCCCHHHHHHHHHHHHHCEEEECCCCCCCEEECCCEEEEEEEEEEEEECCCCCCEEEEEC NYLGGLTGYISGQNALNNQQPMMKQYGVKTASVAPASAASPTALPAKLSRAQVLDIIHVN CCCCCEEEEECCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCHHHCCCEEEEEEEEEE QTNGNLPPYSGSALLMVFLAHGFSVDVTGGCAYHGSVSPSSSYFAAVPLDCGPLFLVTAH CCCCCCCCCCCCHHHEEEHHCCCEEEECCCEEECCCCCCCCCEEEEEECCCCCEEEEEEH EVFEASADPDIANAPGWDEAVDSCTTTVLLPVPGLSLPGYPSNTLPIPGAADNTQSGTCS HHHHCCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEE TTGYTHLVSWEPCGKDDCGISTTPVDANTTRIELAKPVVTQASFPYNSIVFMSGDQIAIG CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCEEEEECCCEEEEE ARGCVQTGGSGLTWKRYVDPSGPNSDRLYFGSMEVPGVLMPMRFSNINGLTIKVPSAEPP CCHHHHCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCC AKLVLYYSDDGYGDNGYYAHDNGTESQCFCPSLDATNCGVGTPGGPALVTLTITRNVSSP EEEEEEECCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCC LTIGTISLSDGKVGAAYSQSLTVNGGTAPFTWQLILGRLPFGLVLNTATGQISGAPINAV EEEEEEEECCCCCCEEECCEEEECCCCCCEEEEEHHHCCCCEEEEECCCCCCCCCCHHHH AGSFLTFKVTDSSSPMQTATVSFPITIAPAN CCCEEEEEEECCCCCCEEEEEEEEEEEECCC >Mature Secondary Structure TRLTTIRELGVLMMLAGAIVVPAQTHAPLQYHGGPVLGTFTIYPLYYGNWSNADIVAQQ CCCHHHHHHHHHHHHHCEEEECCCCCCCEEECCCEEEEEEEEEEEEECCCCCCEEEEEC NYLGGLTGYISGQNALNNQQPMMKQYGVKTASVAPASAASPTALPAKLSRAQVLDIIHVN CCCCCEEEEECCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCHHHCCCEEEEEEEEEE QTNGNLPPYSGSALLMVFLAHGFSVDVTGGCAYHGSVSPSSSYFAAVPLDCGPLFLVTAH CCCCCCCCCCCCHHHEEEHHCCCEEEECCCEEECCCCCCCCCEEEEEECCCCCEEEEEEH EVFEASADPDIANAPGWDEAVDSCTTTVLLPVPGLSLPGYPSNTLPIPGAADNTQSGTCS HHHHCCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEE TTGYTHLVSWEPCGKDDCGISTTPVDANTTRIELAKPVVTQASFPYNSIVFMSGDQIAIG CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCEEEEECCCEEEEE ARGCVQTGGSGLTWKRYVDPSGPNSDRLYFGSMEVPGVLMPMRFSNINGLTIKVPSAEPP CCHHHHCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCC AKLVLYYSDDGYGDNGYYAHDNGTESQCFCPSLDATNCGVGTPGGPALVTLTITRNVSSP EEEEEEECCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCC LTIGTISLSDGKVGAAYSQSLTVNGGTAPFTWQLILGRLPFGLVLNTATGQISGAPINAV EEEEEEEECCCCCCEEECCEEEECCCCCCEEEEEHHHCCCCEEEEECCCCCCCCCCHHHH AGSFLTFKVTDSSSPMQTATVSFPITIAPAN CCCEEEEEEECCCCCCEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA