Click here to switch to the map view.

The map label for this gene is 116621873

Identifier: 116621873

GI number: 116621873

Start: 3491828

End: 3493081

Strand: Direct

Name: 116621873

Synonym: Acid_2756

Alternate gene names: NA

Gene position: 3491828-3493081 (Clockwise)

Preceding gene: 116621871

Following gene: 116621877

Centisome position: 35.04

GC content: 65.95

Gene sequence:

>1254_bases
ATGAGAACCGCACTTACGTTACTCCTCGTCGTAGTCTCCGCCTGGGCGCAGCCCGCCGGCAAACACTGGGTCGCAACCTG
GACTACTGCCCAGCCGCTGATCCGCAATCCGCCGCCGGCCCCGCGATCCCCTGCGCCGGCGCCCGCCGCGCCCGCGGCGA
CTCCCCGCCCGGCCAACCCCGCCCAAGCCCTCGCCCGAGGCTTCCACGATCAGACGGTGCGCATGATCGTCCACACCAGC
ATCGGCGGCTCCGCCCTGCGCATCAAGCTCTCCAACCCATTTGGCGGAGTTCCCATCACCGTGGGCGCCGCGCACATCGC
GCTCCGCGCCAAGGAGTCCGATATCGTCGCTGCATCAGACCATGCGCTCTCCTTCAACGGCAAGCCCTCCTGCACCGTCG
GCCCCGGCATGGTGATCTTCAGCGACGCTCTCGATATGACCGTCCCTGGCCAGTCCGATCTCGCCGTGAGCCTCTACCTG
CCCGGCGAAACCGGCCCTCCCTCTGCCCACAACGGGCTGCACACCAGCTACGTCAAGGAGGGTGATCAGACCTCCGCGCC
CGCCCTCCCGGACCCCATCGCCGCGCCCAACTACTACTGGCTCGCCGGTATCGACGTCCTCGCCCCCGCCGATTCTTCCC
TTCTTGTCACCTATGGCGATTCCATCACCGAAGGCGCGCGCTCCACGCCCGATACCGACCGCATGTGGCCCGCAGTCCTC
AGTGCCCGCCTCGCGGCCAACAAGGGCACCGCCCACATAGCGGTTGCCAATATGGGCATCGGCGGCAATCGCGTCCTGCG
CGATGGCTCCGGCGCCAGTGCGCTAGCCCGCTTTGATCGCGACGTCCTCAGCCAGTCCGGCGTCAAATGGGTGATGATGC
TCGAAGGCATCAACGATATCGGCCACGGCGATACCGAACCCATTACCTCAGACGATCTGATCGGAGCCTATAGGCAGATC
ATCGAACGCGCCCACACTCACGGCATTCGCGTTATCGGCTGCACCCTGCCGCCCTACGAAGGCGCCGGCTATTCTCGGGA
GGAAGGCGAAGCCATCCGGCAGGCGCTCAATACCTGGATCCGCACCGGCAAAGCCTTCGACGCCGTCGTCGATTTCGAGG
CCGCCACTCGCGACTCCAACAATCCCCGCAAGCTCCGTGCGGATTTCGACCCCGGCGATCACCTCCACCCCAACGACGCC
GGCTACAAAGCCATGGCGGATGCCGTCGATCTCTCGATCTTCACGCGCAAGTAA

Upstream 100 bases:

>100_bases
GCGGCGAACCTCCTAAGGTCCGCGCGGAGACCGCGATCGCGAGCACCAACTCACCCAAGAGCCGCCGCCCGGATAATATA
TAGAAAACAGGAACGCGCAA

Downstream 100 bases:

>100_bases
CTACTTCCGCTTCTGTCTGGCCTCTGCCAGCGCGGCAATAAACGCGCGAACCTCCGCGGTGTCCCGTTGGGCACGCGCGA
ACCGCTCCACATCGTCGAGC

Product: GDSL family lipase

Products: NA

Alternate protein names: Lipolytic Protein G-D-S-L Family; GDSL Family Lipase; G-D-S-L Family Lipolytic Protein; Lipolytic G-D-S-L; Lipolytic; SGNH Hydrolase; GDSL-Like Lipase/Acylhydrolase Family Protein; Lipase/Acylhydrolase; GDSL-Like Lipase/Acylhydrolase; GDSL-Like Lipase/Acylhydrolase Domain Protein; Lipid Hydrolase; Lipolytic Protein; Lipolytic G-D-S-L Domain Protein; Esterase; LOW QUALITY PROTEIN Secreted Protein; Gdsl-Like Lipase/Acylhydrolase Family Protein; GDSL-Like Protein; Lipolytic GDSL Family; Lysophospholipase L1-Like Esterase; GDSL-Like Lipase/Acylhydrolase Exported Protein; Lysophospholipase L1 Or Related Esterase

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MRTALTLLLVVVSAWAQPAGKHWVATWTTAQPLIRNPPPAPRSPAPAPAAPAATPRPANPAQALARGFHDQTVRMIVHTS
IGGSALRIKLSNPFGGVPITVGAAHIALRAKESDIVAASDHALSFNGKPSCTVGPGMVIFSDALDMTVPGQSDLAVSLYL
PGETGPPSAHNGLHTSYVKEGDQTSAPALPDPIAAPNYYWLAGIDVLAPADSSLLVTYGDSITEGARSTPDTDRMWPAVL
SARLAANKGTAHIAVANMGIGGNRVLRDGSGASALARFDRDVLSQSGVKWVMMLEGINDIGHGDTEPITSDDLIGAYRQI
IERAHTHGIRVIGCTLPPYEGAGYSREEGEAIRQALNTWIRTGKAFDAVVDFEAATRDSNNPRKLRADFDPGDHLHPNDA
GYKAMADAVDLSIFTRK

Sequences:

>Translated_417_residues
MRTALTLLLVVVSAWAQPAGKHWVATWTTAQPLIRNPPPAPRSPAPAPAAPAATPRPANPAQALARGFHDQTVRMIVHTS
IGGSALRIKLSNPFGGVPITVGAAHIALRAKESDIVAASDHALSFNGKPSCTVGPGMVIFSDALDMTVPGQSDLAVSLYL
PGETGPPSAHNGLHTSYVKEGDQTSAPALPDPIAAPNYYWLAGIDVLAPADSSLLVTYGDSITEGARSTPDTDRMWPAVL
SARLAANKGTAHIAVANMGIGGNRVLRDGSGASALARFDRDVLSQSGVKWVMMLEGINDIGHGDTEPITSDDLIGAYRQI
IERAHTHGIRVIGCTLPPYEGAGYSREEGEAIRQALNTWIRTGKAFDAVVDFEAATRDSNNPRKLRADFDPGDHLHPNDA
GYKAMADAVDLSIFTRK
>Mature_417_residues
MRTALTLLLVVVSAWAQPAGKHWVATWTTAQPLIRNPPPAPRSPAPAPAAPAATPRPANPAQALARGFHDQTVRMIVHTS
IGGSALRIKLSNPFGGVPITVGAAHIALRAKESDIVAASDHALSFNGKPSCTVGPGMVIFSDALDMTVPGQSDLAVSLYL
PGETGPPSAHNGLHTSYVKEGDQTSAPALPDPIAAPNYYWLAGIDVLAPADSSLLVTYGDSITEGARSTPDTDRMWPAVL
SARLAANKGTAHIAVANMGIGGNRVLRDGSGASALARFDRDVLSQSGVKWVMMLEGINDIGHGDTEPITSDDLIGAYRQI
IERAHTHGIRVIGCTLPPYEGAGYSREEGEAIRQALNTWIRTGKAFDAVVDFEAATRDSNNPRKLRADFDPGDHLHPNDA
GYKAMADAVDLSIFTRK

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43997; Mature: 43997

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTALTLLLVVVSAWAQPAGKHWVATWTTAQPLIRNPPPAPRSPAPAPAAPAATPRPANP
CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCH
AQALARGFHDQTVRMIVHTSIGGSALRIKLSNPFGGVPITVGAAHIALRAKESDIVAASD
HHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCCCCCEEEECEEEEEEEECCCCEEEECC
HALSFNGKPSCTVGPGMVIFSDALDMTVPGQSDLAVSLYLPGETGPPSAHNGLHTSYVKE
CEEEECCCCCCEECCCEEEEECCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCC
GDQTSAPALPDPIAAPNYYWLAGIDVLAPADSSLLVTYGDSITEGARSTPDTDRMWPAVL
CCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCEEEEECCCHHCCCCCCCCCHHHHHHHH
SARLAANKGTAHIAVANMGIGGNRVLRDGSGASALARFDRDVLSQSGVKWVMMLEGINDI
HHHHHCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCC
GHGDTEPITSDDLIGAYRQIIERAHTHGIRVIGCTLPPYEGAGYSREEGEAIRQALNTWI
CCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
RTGKAFDAVVDFEAATRDSNNPRKLRADFDPGDHLHPNDAGYKAMADAVDLSIFTRK
HCCCHHHHEEECHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHEEEEEECC
>Mature Secondary Structure
MRTALTLLLVVVSAWAQPAGKHWVATWTTAQPLIRNPPPAPRSPAPAPAAPAATPRPANP
CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCH
AQALARGFHDQTVRMIVHTSIGGSALRIKLSNPFGGVPITVGAAHIALRAKESDIVAASD
HHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCCCCCEEEECEEEEEEEECCCCEEEECC
HALSFNGKPSCTVGPGMVIFSDALDMTVPGQSDLAVSLYLPGETGPPSAHNGLHTSYVKE
CEEEECCCCCCEECCCEEEEECCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCC
GDQTSAPALPDPIAAPNYYWLAGIDVLAPADSSLLVTYGDSITEGARSTPDTDRMWPAVL
CCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCEEEEECCCHHCCCCCCCCCHHHHHHHH
SARLAANKGTAHIAVANMGIGGNRVLRDGSGASALARFDRDVLSQSGVKWVMMLEGINDI
HHHHHCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCC
GHGDTEPITSDDLIGAYRQIIERAHTHGIRVIGCTLPPYEGAGYSREEGEAIRQALNTWI
CCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
RTGKAFDAVVDFEAATRDSNNPRKLRADFDPGDHLHPNDAGYKAMADAVDLSIFTRK
HCCCHHHHEEECHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA