| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is bglX [H]
Identifier: 116621797
GI number: 116621797
Start: 3392695
End: 3394992
Strand: Direct
Name: bglX [H]
Synonym: Acid_2679
Alternate gene names: 116621797
Gene position: 3392695-3394992 (Clockwise)
Preceding gene: 116621796
Following gene: 116621798
Centisome position: 34.04
GC content: 64.36
Gene sequence:
>2298_bases ATGCCTCGGCCCGCCAAAATTGAGCCGTACCGAAACCCCGCGCTGCCGCCTGCCAAGCGCGCCAAAGACCTGCTCTCCCA CATGACGCTGGAAGAGAAAGCCGCGCAGATGATGTGCGTCTGGCAGCAAAAGGCCGACACGCTGGTGGATGCCGACGGAC GCTTCGATCCCGAGAAGGCCCGTAAGGCATTTAAAGACCGGCGCGGCCTCGGACAGGTCGGGCGTCCCAGCGATGCAGGC AAGGGCCAGGATGCGCGCGGCATGGCCGAGCTCACCAACGCCATCCAGAAGTTTTTCATCGAGAACAGCCGGCTCGGCAT CCCGGTCATCTTTCACGAGGAGTGCCTGCACGGCCACGCCGCCATCGGCGGCACCAGCTTCCCGCAGCCCATCGGCCTCG GCGCCACCTTCGATCCCGAGCTTGTGGAATCGCTCTTCGCCATGACCGCCGCCGAGGCCCGCGCCCGCGGCACGCACCAA GCCCTCACCCCCGTGGTGGATGTCGCCCGCGAGCCGCGCTGGGGACGCGTCGAGGAGACTTACGGCGAGGATCCGTTCCT GGTTTCGCGCATGGGTATCGCCGCCGTTCGCGGCTTTCAGGGCGACGCGACATTCCGCGACAAGACGCGCGTGATCGCCA CGCTCAAGCATTTCGCCGCTCACGGCCAACCCGAATCGGGCACTAACTGCGCGCCCGTCAACGTCTCCATGCGAGTGCTG CGCGAGACGTTTCTCTTCCCCTTCAAAGAAGCGCTGGACAAGGGGTGCGCGATCAGCGTCATGGCCTCCTACAACGAGAT CGATGGCGTCCCCTCGCACGCCAGCCGCTGGCTGCTGCGCGACGTCCTCCGCAAGGAGTGGGGCTTCAAAGGCTTCGTCG TTTCGGACTATTACGCGATTTACGAACTGAGCTACCGCCCCGAATCGCACGGACATTTCGTCGCCAAAGACAAGCGCGAG GCCTGCGCGCTCGCCGTGCAGGCGGGCGTGAACATCGAACTGCCCGAGCCTGATTGCTACCTCCACCTGGTGGACCTGGT GCATAAAGGCGTGCTCCAGGAATCGCAGCTCGATGAGTTGGTCGAGCCCATGCTGCGCTGGAAATTCCAGATGGGGCTCT TCGACGATCCTTATGTGGATCCCGCCGAGGCCGAGCGGATCGCCGGCTGCGACGCGCACCGCGAACTCGCCATGCAGGCT GCGCGCGAGACCATTACTCTGCTCAAGAACGATGGGCCCGTGGTCCCGCTCGATCTCTCCGCCATCAAGACCATCGCGGT CATCGGACCCAATGCGAACCGCAGCCTGCTGGGCGGCTACAGCGGCGTGCCCAAGCACGATGTCACTGTGCTCGATGGCA TCCGCGAACGCGTCGGCAGCCGCGCCAAAGTGGTTTACGCCGAAGGCTGCAAGATCACCATCGGCGGTTCGTGGGTCCAG GACGAAGTCACGCCCAGCGATCCCGCGGAAGACCGCCGCCAGATCGCCGAGGCCGTGAAAGTCGCCAAACGCGCCGACGT CATCGTGTTGGCCATCGGCGGCAACGAGCAGACGTCGCGCGAGGCCTGGTCGCCCAAGCACCTCGGCGATCGCCCCAGCC TCGACTTGGTCGGACGGCAGGAGGAACTCGTGCGCGCCATGGTGGCCACCGGCAAACCCGTGATCGCTTTCCTGTTCAAC GGCCGCCCCATCTCCATCAACTACCTGGCCCAGTCCGTACCCGCGATTTTCGAGTGCTGGTATCTCGGCCAGGAGACCGG CCGCGCCGTCGCCGAAGTCCTGTTCGGCGACACCAACCCCGGCGGCAAACTGCCGATCACCATCCCGCGCTCCGCGGGCC ACCTGCCTGCCTTCTACAATCACAAGCCTTCGGCGCGCCGCGGCTATCTCTTTGACGAGGTCGGGCCGCTTTACGCTTTC GGCTACGGCCTGAGCTACACCACCTTCGCCTTCCAGAACCTGCGCCTCGCGAAAAAGAAGATGCACCGCGAGAGCACGGC GCGCGTGCTCGTGGACGTCACCAACACCGGCGCGCGCGAGGGCAGGGAAGTAGTGCAGCTCTATATCCGCGACCTGGTAA GCTCGGTGACGCGCCCCATCAAGGAATTGAAGGGTTTCCGGAAAATCACGCTCCAGCCGGGGCAGACCCAGACCGTGGAA TTCGAGATCACGCCGGACCTGCTCGCCTTTTATAACGTCGATATGAAATTCGTCGTCGAGCCGGGCGACTTCGAAATCAT GGTGGGCAGTTCCTCGCGCGATGCCGACTTGCAGAAAGTAATCCTCCGGGTGGAATGA
Upstream 100 bases:
>100_bases GTAGCCCTGGTCCTTCAAAAACACTTCAGCGTGTAGTCTCTTCGCCGAGTCTCCCTTTGATTCGCGAGTGCCATCGGGTA TAGTTGTAATCCACAACTAT
Downstream 100 bases:
>100_bases TGCAATCCTCACAGAAACTCTCATTTTTCGAGAAGGCCGGCTATAGCCTGGGAGACGGCGCCGCCAACTTCGTCTTCATG ACGATGATCCTCTTCCAGCT
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 765; Mature: 764
Protein sequence:
>765_residues MPRPAKIEPYRNPALPPAKRAKDLLSHMTLEEKAAQMMCVWQQKADTLVDADGRFDPEKARKAFKDRRGLGQVGRPSDAG KGQDARGMAELTNAIQKFFIENSRLGIPVIFHEECLHGHAAIGGTSFPQPIGLGATFDPELVESLFAMTAAEARARGTHQ ALTPVVDVAREPRWGRVEETYGEDPFLVSRMGIAAVRGFQGDATFRDKTRVIATLKHFAAHGQPESGTNCAPVNVSMRVL RETFLFPFKEALDKGCAISVMASYNEIDGVPSHASRWLLRDVLRKEWGFKGFVVSDYYAIYELSYRPESHGHFVAKDKRE ACALAVQAGVNIELPEPDCYLHLVDLVHKGVLQESQLDELVEPMLRWKFQMGLFDDPYVDPAEAERIAGCDAHRELAMQA ARETITLLKNDGPVVPLDLSAIKTIAVIGPNANRSLLGGYSGVPKHDVTVLDGIRERVGSRAKVVYAEGCKITIGGSWVQ DEVTPSDPAEDRRQIAEAVKVAKRADVIVLAIGGNEQTSREAWSPKHLGDRPSLDLVGRQEELVRAMVATGKPVIAFLFN GRPISINYLAQSVPAIFECWYLGQETGRAVAEVLFGDTNPGGKLPITIPRSAGHLPAFYNHKPSARRGYLFDEVGPLYAF GYGLSYTTFAFQNLRLAKKKMHRESTARVLVDVTNTGAREGREVVQLYIRDLVSSVTRPIKELKGFRKITLQPGQTQTVE FEITPDLLAFYNVDMKFVVEPGDFEIMVGSSSRDADLQKVILRVE
Sequences:
>Translated_765_residues MPRPAKIEPYRNPALPPAKRAKDLLSHMTLEEKAAQMMCVWQQKADTLVDADGRFDPEKARKAFKDRRGLGQVGRPSDAG KGQDARGMAELTNAIQKFFIENSRLGIPVIFHEECLHGHAAIGGTSFPQPIGLGATFDPELVESLFAMTAAEARARGTHQ ALTPVVDVAREPRWGRVEETYGEDPFLVSRMGIAAVRGFQGDATFRDKTRVIATLKHFAAHGQPESGTNCAPVNVSMRVL RETFLFPFKEALDKGCAISVMASYNEIDGVPSHASRWLLRDVLRKEWGFKGFVVSDYYAIYELSYRPESHGHFVAKDKRE ACALAVQAGVNIELPEPDCYLHLVDLVHKGVLQESQLDELVEPMLRWKFQMGLFDDPYVDPAEAERIAGCDAHRELAMQA ARETITLLKNDGPVVPLDLSAIKTIAVIGPNANRSLLGGYSGVPKHDVTVLDGIRERVGSRAKVVYAEGCKITIGGSWVQ DEVTPSDPAEDRRQIAEAVKVAKRADVIVLAIGGNEQTSREAWSPKHLGDRPSLDLVGRQEELVRAMVATGKPVIAFLFN GRPISINYLAQSVPAIFECWYLGQETGRAVAEVLFGDTNPGGKLPITIPRSAGHLPAFYNHKPSARRGYLFDEVGPLYAF GYGLSYTTFAFQNLRLAKKKMHRESTARVLVDVTNTGAREGREVVQLYIRDLVSSVTRPIKELKGFRKITLQPGQTQTVE FEITPDLLAFYNVDMKFVVEPGDFEIMVGSSSRDADLQKVILRVE >Mature_764_residues PRPAKIEPYRNPALPPAKRAKDLLSHMTLEEKAAQMMCVWQQKADTLVDADGRFDPEKARKAFKDRRGLGQVGRPSDAGK GQDARGMAELTNAIQKFFIENSRLGIPVIFHEECLHGHAAIGGTSFPQPIGLGATFDPELVESLFAMTAAEARARGTHQA LTPVVDVAREPRWGRVEETYGEDPFLVSRMGIAAVRGFQGDATFRDKTRVIATLKHFAAHGQPESGTNCAPVNVSMRVLR ETFLFPFKEALDKGCAISVMASYNEIDGVPSHASRWLLRDVLRKEWGFKGFVVSDYYAIYELSYRPESHGHFVAKDKREA CALAVQAGVNIELPEPDCYLHLVDLVHKGVLQESQLDELVEPMLRWKFQMGLFDDPYVDPAEAERIAGCDAHRELAMQAA RETITLLKNDGPVVPLDLSAIKTIAVIGPNANRSLLGGYSGVPKHDVTVLDGIRERVGSRAKVVYAEGCKITIGGSWVQD EVTPSDPAEDRRQIAEAVKVAKRADVIVLAIGGNEQTSREAWSPKHLGDRPSLDLVGRQEELVRAMVATGKPVIAFLFNG RPISINYLAQSVPAIFECWYLGQETGRAVAEVLFGDTNPGGKLPITIPRSAGHLPAFYNHKPSARRGYLFDEVGPLYAFG YGLSYTTFAFQNLRLAKKKMHRESTARVLVDVTNTGAREGREVVQLYIRDLVSSVTRPIKELKGFRKITLQPGQTQTVEF EITPDLLAFYNVDMKFVVEPGDFEIMVGSSSRDADLQKVILRVE
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=769, Percent_Identity=37.9713914174252, Blast_Score=503, Evalue=1e-143,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 84591; Mature: 84460
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPAKIEPYRNPALPPAKRAKDLLSHMTLEEKAAQMMCVWQQKADTLVDADGRFDPEKA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHH RKAFKDRRGLGQVGRPSDAGKGQDARGMAELTNAIQKFFIENSRLGIPVIFHEECLHGHA HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCC AIGGTSFPQPIGLGATFDPELVESLFAMTAAEARARGTHQALTPVVDVAREPRWGRVEET CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHH YGEDPFLVSRMGIAAVRGFQGDATFRDKTRVIATLKHFAAHGQPESGTNCAPVNVSMRVL CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHH RETFLFPFKEALDKGCAISVMASYNEIDGVPSHASRWLLRDVLRKEWGFKGFVVSDYYAI HHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECEEEE YELSYRPESHGHFVAKDKREACALAVQAGVNIELPEPDCYLHLVDLVHKGVLQESQLDEL EEEECCCCCCCCEEECCCHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHH VEPMLRWKFQMGLFDDPYVDPAEAERIAGCDAHRELAMQAARETITLLKNDGPVVPLDLS HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCEEEEEHH AIKTIAVIGPNANRSLLGGYSGVPKHDVTVLDGIRERVGSRAKVVYAEGCKITIGGSWVQ HHCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCEEE DEVTPSDPAEDRRQIAEAVKVAKRADVIVLAIGGNEQTSREAWSPKHLGDRPSLDLVGRQ CCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCH EELVRAMVATGKPVIAFLFNGRPISINYLAQSVPAIFECWYLGQETGRAVAEVLFGDTNP HHHHHHHHHCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC GGKLPITIPRSAGHLPAFYNHKPSARRGYLFDEVGPLYAFGYGLSYTTFAFQNLRLAKKK CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCHHHHHHHHHHHHHHH MHRESTARVLVDVTNTGAREGREVVQLYIRDLVSSVTRPIKELKGFRKITLQPGQTQTVE HHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEE FEITPDLLAFYNVDMKFVVEPGDFEIMVGSSSRDADLQKVILRVE EEECHHHHHHCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHCCC >Mature Secondary Structure PRPAKIEPYRNPALPPAKRAKDLLSHMTLEEKAAQMMCVWQQKADTLVDADGRFDPEKA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHH RKAFKDRRGLGQVGRPSDAGKGQDARGMAELTNAIQKFFIENSRLGIPVIFHEECLHGHA HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCC AIGGTSFPQPIGLGATFDPELVESLFAMTAAEARARGTHQALTPVVDVAREPRWGRVEET CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHH YGEDPFLVSRMGIAAVRGFQGDATFRDKTRVIATLKHFAAHGQPESGTNCAPVNVSMRVL CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHH RETFLFPFKEALDKGCAISVMASYNEIDGVPSHASRWLLRDVLRKEWGFKGFVVSDYYAI HHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECEEEE YELSYRPESHGHFVAKDKREACALAVQAGVNIELPEPDCYLHLVDLVHKGVLQESQLDEL EEEECCCCCCCCEEECCCHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHH VEPMLRWKFQMGLFDDPYVDPAEAERIAGCDAHRELAMQAARETITLLKNDGPVVPLDLS HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCEEEEEHH AIKTIAVIGPNANRSLLGGYSGVPKHDVTVLDGIRERVGSRAKVVYAEGCKITIGGSWVQ HHCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCEEE DEVTPSDPAEDRRQIAEAVKVAKRADVIVLAIGGNEQTSREAWSPKHLGDRPSLDLVGRQ CCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCH EELVRAMVATGKPVIAFLFNGRPISINYLAQSVPAIFECWYLGQETGRAVAEVLFGDTNP HHHHHHHHHCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC GGKLPITIPRSAGHLPAFYNHKPSARRGYLFDEVGPLYAFGYGLSYTTFAFQNLRLAKKK CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCHHHHHHHHHHHHHHH MHRESTARVLVDVTNTGAREGREVVQLYIRDLVSSVTRPIKELKGFRKITLQPGQTQTVE HHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEE FEITPDLLAFYNVDMKFVVEPGDFEIMVGSSSRDADLQKVILRVE EEECHHHHHHCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]