| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621748
Identifier: 116621748
GI number: 116621748
Start: 3327249
End: 3328799
Strand: Direct
Name: 116621748
Synonym: Acid_2630
Alternate gene names: NA
Gene position: 3327249-3328799 (Clockwise)
Preceding gene: 116621747
Following gene: 116621751
Centisome position: 33.39
GC content: 58.28
Gene sequence:
>1551_bases ATGCCACCAGTGGTGGCCCCCGTCATCGAGCCGGAGAAGCCGAAAGCGAAGGTGAAGCCAATCGACCGCAGCCAAGGCGT TTTGCGCCCGGTGATTGTGGAGGAATTGGTCGGGCCGGATCACAAGGTAAGAGCGATCTGGGAGCTGACGGGGCAGTTGG ACCTGAGTGGCTATTACGGCAAGATCCAAAGCCAGGAAGGGAAAGCGGGGAGTTCGGCTTGGAACCCGCAGTTGTTGTTG AGCGTGTGGCTATATGCATACAGCGAACAGGTAACGTCGGCACGATACCTCTCCACCCTTATGGAATACGAACCGGGGCT GATGTGGCTGGCGGGCTTGGGCGTAGTGAACTATTGGACGCTGAATGCGTTTCGAAGTTCGCACCAGGAAGAGTTGAGCA AACTGCTTGCCGAGTTGTTGGGGGTTTTGTCACATGAAGGTCTGATCACGCTGGAGTGTGTGGCGCACGATGGCACCAAG ATTCAAGCCCAGGCGGGGAGCGACACGTTTCGGCGCGGGAAGACGTTAGAGAAAGAGATCCTCAAGGCGCAGGAACTAGT CGTGGAGTTGGAGCGGCAAGAGGCCAGTGGGGGAAGTGGGAATGCCCGGCGCGATGCGGCGCAACGGCGTGCGGCACGGG AGCGAAACGAACGGATGAAGTTGGCCGCGGAGGAGTTAGAGAAGGTGCGCGCCGCAAAGAAAAGCGAGCAGGAGCGGGCG GAAGCGCGGGTGAGCCTGACCGAACCGGAATCGCGGAATATGAAGCACGGCAACAACGCGATCGAACCGAGTTACAACGT ACAGATCAGCGTGGATGCCGAGCAAAAAATTATCGTGGGGTTCTGCTTGACGCAGTCCAGCAGCGATAGCGGATGCTTGC AGGAGGCGATGGAGCAGGTGAAGGAAACGGTGGGACGTTACCCGGAGCAGTCGGTGGCCGATGGAGGTTTCACCAATCAA GCTTCGATCCACGACATGAACCAGAGCGGGATCGATTTCTATGGATCGCTGGCGGAGCCGGAAATGAGGCAGGCGGCATC GATGAAGGCGGCGGGAATCGATCCGGCATTCGGGCCGTCAGCGTTTCAAGTCCTGACAGAAAGCAAGAGCTTGCAGTGTC CGGCGGGCAAGATATTGGAGTACGTGCGGCAGTCCAAGAAGGGCGACACGACGTACTGGCAATATCAGGCGGAGAGCAAG GATTGCGGCGGTTGTGAGTATCAAAAGCAGTGTTGCCCTCGGCCGGAAAAAGGGCGGCTGGTGTCGATCCGAATGGAAGA GAACGAGGAAGTAGCAGCGTTCCGAGAAAAGATGAAGACGGAAGCGGCGCAGCAGATATACAAGAAGCGAGGGCCAGTAG CGGAATTCCCGAATGCGTGGATCAAGGAGAAGTTGGGGATTCGGAAATTCCGGCTGCGAGGGATGGCCAAAGCGACAACG GAGGCCTTGTGGGGAGTGCTGACCTACGACGTGCAGCAATGGATCCGCCTGAGTTGGCGTCCGAAAGTGATGGCCGCGGT AGTAGGGAACGGGGCTACGCAGTTAGCGTAG
Upstream 100 bases:
>100_bases CCAGCCTAAAACATTTAAGGCATGAAATGTTTTGGCTGATAATCTAAGCATGAACTCCGAAGGGCAAGGAATTCTCCTGG AAATTCCGGAGCAACCGCCA
Downstream 100 bases:
>100_bases GTGAGCGGAAGCCGGCGGTGTGCAGCAGGCAAAGCGCGGCGATCCAGCAAGCCAGAATAAGAGGCTTGAATTCAATCAGA TTGCGGGAGCAAGGTTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; IS4 Family Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; ISPsy6 Transposase; ISCps6 Transposase; ISNCY Family Transposase; ISPpu20 Transposase; Transposase Is4 Family
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MPPVVAPVIEPEKPKAKVKPIDRSQGVLRPVIVEELVGPDHKVRAIWELTGQLDLSGYYGKIQSQEGKAGSSAWNPQLLL SVWLYAYSEQVTSARYLSTLMEYEPGLMWLAGLGVVNYWTLNAFRSSHQEELSKLLAELLGVLSHEGLITLECVAHDGTK IQAQAGSDTFRRGKTLEKEILKAQELVVELERQEASGGSGNARRDAAQRRAARERNERMKLAAEELEKVRAAKKSEQERA EARVSLTEPESRNMKHGNNAIEPSYNVQISVDAEQKIIVGFCLTQSSSDSGCLQEAMEQVKETVGRYPEQSVADGGFTNQ ASIHDMNQSGIDFYGSLAEPEMRQAASMKAAGIDPAFGPSAFQVLTESKSLQCPAGKILEYVRQSKKGDTTYWQYQAESK DCGGCEYQKQCCPRPEKGRLVSIRMEENEEVAAFREKMKTEAAQQIYKKRGPVAEFPNAWIKEKLGIRKFRLRGMAKATT EALWGVLTYDVQQWIRLSWRPKVMAAVVGNGATQLA
Sequences:
>Translated_516_residues MPPVVAPVIEPEKPKAKVKPIDRSQGVLRPVIVEELVGPDHKVRAIWELTGQLDLSGYYGKIQSQEGKAGSSAWNPQLLL SVWLYAYSEQVTSARYLSTLMEYEPGLMWLAGLGVVNYWTLNAFRSSHQEELSKLLAELLGVLSHEGLITLECVAHDGTK IQAQAGSDTFRRGKTLEKEILKAQELVVELERQEASGGSGNARRDAAQRRAARERNERMKLAAEELEKVRAAKKSEQERA EARVSLTEPESRNMKHGNNAIEPSYNVQISVDAEQKIIVGFCLTQSSSDSGCLQEAMEQVKETVGRYPEQSVADGGFTNQ ASIHDMNQSGIDFYGSLAEPEMRQAASMKAAGIDPAFGPSAFQVLTESKSLQCPAGKILEYVRQSKKGDTTYWQYQAESK DCGGCEYQKQCCPRPEKGRLVSIRMEENEEVAAFREKMKTEAAQQIYKKRGPVAEFPNAWIKEKLGIRKFRLRGMAKATT EALWGVLTYDVQQWIRLSWRPKVMAAVVGNGATQLA >Mature_515_residues PPVVAPVIEPEKPKAKVKPIDRSQGVLRPVIVEELVGPDHKVRAIWELTGQLDLSGYYGKIQSQEGKAGSSAWNPQLLLS VWLYAYSEQVTSARYLSTLMEYEPGLMWLAGLGVVNYWTLNAFRSSHQEELSKLLAELLGVLSHEGLITLECVAHDGTKI QAQAGSDTFRRGKTLEKEILKAQELVVELERQEASGGSGNARRDAAQRRAARERNERMKLAAEELEKVRAAKKSEQERAE ARVSLTEPESRNMKHGNNAIEPSYNVQISVDAEQKIIVGFCLTQSSSDSGCLQEAMEQVKETVGRYPEQSVADGGFTNQA SIHDMNQSGIDFYGSLAEPEMRQAASMKAAGIDPAFGPSAFQVLTESKSLQCPAGKILEYVRQSKKGDTTYWQYQAESKD CGGCEYQKQCCPRPEKGRLVSIRMEENEEVAAFREKMKTEAAQQIYKKRGPVAEFPNAWIKEKLGIRKFRLRGMAKATTE ALWGVLTYDVQQWIRLSWRPKVMAAVVGNGATQLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57408; Mature: 57277
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVVAPVIEPEKPKAKVKPIDRSQGVLRPVIVEELVGPDHKVRAIWELTGQLDLSGYYG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEEEECCCEEECCCCC KIQSQEGKAGSSAWNPQLLLSVWLYAYSEQVTSARYLSTLMEYEPGLMWLAGLGVVNYWT CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCHHHHHH LNAFRSSHQEELSKLLAELLGVLSHEGLITLECVAHDGTKIQAQAGSDTFRRGKTLEKEI HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCHHHHHCCHHHHHH LKAQELVVELERQEASGGSGNARRDAAQRRAARERNERMKLAAEELEKVRAAKKSEQERA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARVSLTEPESRNMKHGNNAIEPSYNVQISVDAEQKIIVGFCLTQSSSDSGCLQEAMEQV HHEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHH KETVGRYPEQSVADGGFTNQASIHDMNQSGIDFYGSLAEPEMRQAASMKAAGIDPAFGPS HHHHCCCCCCHHCCCCCCCCCHHCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCH AFQVLTESKSLQCPAGKILEYVRQSKKGDTTYWQYQAESKDCGGCEYQKQCCPRPEKGRL HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCE VSIRMEENEEVAAFREKMKTEAAQQIYKKRGPVAEFPNAWIKEKLGIRKFRLRGMAKATT EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHH EALWGVLTYDVQQWIRLSWRPKVMAAVVGNGATQLA HHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCHHCCC >Mature Secondary Structure PPVVAPVIEPEKPKAKVKPIDRSQGVLRPVIVEELVGPDHKVRAIWELTGQLDLSGYYG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEEEECCCEEECCCCC KIQSQEGKAGSSAWNPQLLLSVWLYAYSEQVTSARYLSTLMEYEPGLMWLAGLGVVNYWT CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCHHHHHH LNAFRSSHQEELSKLLAELLGVLSHEGLITLECVAHDGTKIQAQAGSDTFRRGKTLEKEI HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCHHHHHCCHHHHHH LKAQELVVELERQEASGGSGNARRDAAQRRAARERNERMKLAAEELEKVRAAKKSEQERA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARVSLTEPESRNMKHGNNAIEPSYNVQISVDAEQKIIVGFCLTQSSSDSGCLQEAMEQV HHEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHH KETVGRYPEQSVADGGFTNQASIHDMNQSGIDFYGSLAEPEMRQAASMKAAGIDPAFGPS HHHHCCCCCCHHCCCCCCCCCHHCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCH AFQVLTESKSLQCPAGKILEYVRQSKKGDTTYWQYQAESKDCGGCEYQKQCCPRPEKGRL HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCE VSIRMEENEEVAAFREKMKTEAAQQIYKKRGPVAEFPNAWIKEKLGIRKFRLRGMAKATT EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHH EALWGVLTYDVQQWIRLSWRPKVMAAVVGNGATQLA HHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA