| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621747
Identifier: 116621747
GI number: 116621747
Start: 3325443
End: 3327101
Strand: Direct
Name: 116621747
Synonym: Acid_2629
Alternate gene names: NA
Gene position: 3325443-3327101 (Clockwise)
Preceding gene: 116621745
Following gene: 116621748
Centisome position: 33.37
GC content: 65.28
Gene sequence:
>1659_bases ATGAAGGCAGTTGCGGCGGCGGTCTGGATTCTGGCGGCGGGCGGCATGGCCCAGGGGTTTCAGGCGGCGCAGGCTCCGGC CAAAGGGTCTATCGAAGGCCAGGTGGTAAATCTGAAGGGCGGCGCGCCTTTGAAAAAGGCGAACGTGCAGCTCAACATGA TCAACCCCGGCGGTCCCACACCCATGGGCGGCCGCGGCCAGGTGCAGATTCGCAAGGCGACGGAAACGGATGACCAGGGG CGCTTCTCCTTCCCCGGCCTGGACCCCGGAAAGTACCGCCTCTCTGCCGACCGCCAGGGATTCCTGCACCAGAACTACGG GGCGCGCAAGTTCTCGGGCAGCGGTACGCCGGTGCTGGTGGGCGACGGGCAGTCTGTCAAGGGCATTGTGTTCTCGATGA ACCCGCAGGCGGTGATCACGGGCAAGGTGCTGGACGAGGACGGCGAGCCGGTGGCGAACGTGCAAGTGCGGGCGATGCGG TACGTTTATCGCGGCGGCAAGAAGCAATGGTCGCAGGTGGCGAACGCCACCACCACGGACATCGGCGAATTCCGGCTGCC GAGCCTGGAGCCGGGGCGATACATCGTCTCCTCGAACGCGCGCAACACGGGTATTGGCCCGCGCAGGCCGCAAAGCGACG AGCCGCTGCCGGCGACGCCGGACCTGGTGTACGCGTCCACATATTATCCGAGCACGTTGAATGCGGGTACGGCGGTGCCG ATTGACGTGGGCGGCGGCGGCGAGATCCGCGGCATCGATATCCGGCTCGTGAAGACGCGCGTGTATCGTGTCCGCGGCAA AGTCACGGGGGCAGTGAACAACGAGCGCAATGCGCCGGTCATGGTCTCGCTGAGCCAGAAAGATCTGCCGGGTAATCCGA TCATGGGGATGGCGAACGGCCCCGAGGGGCAGTTCGAGATTCGCAACGTGCCGCCGGGATCGTACATCGCGACCGCGCAA TCCCGCGGGCGCGGGCAGGAGGCCATCGCGATCCAGCCGGTGGACGTAGTGGGCAGCCACGTGGATGGCATCGTGCTCAC GATGGAGGCGGGCAAGGATGTGCAGGGCGGCGTGAAGGTGGTGGACGCGACTACGCCTCCCGAATTCAAGAATCTGGGCG TGATGCTGCGGCCGGTGGGTTTCATGGGGATGGGCGGTCCGGGGCGCACGCGCGTGGGCGAGGACCTCAAGTTCACGTTG AAGAGCGTGCCGGCGGTGCGCTACGCCGTCAGTGTGGTGGGGCTGCCCGATACCTGCTACGTGAAATCCATTCAGTACGG CGGGCGCGACGTCACCGAGGAAGGCATCGAGATGACGAGCGGCGCCACGCTGGATGTGGTGGTGAGCGCCGCGGCGGCGC AGGTGGACGCAGTGGTGATGGATAAAGACGGCAAGGCCGCGTGGAACGCGACCGTCGCGGTGTCGGCGAAGGACGGCACC AATATTCAGGTGCGAACGGCCGATGAGAACGGGATTCTCTCGCTGCGGGGATTGAAACCTGGCGAGTACCGGCTGTACGC GTGGGAGGATGTCGAGCCGGGCGCGCCCTCCGATCCGGATTTCCTGAAGCAGTACGAGGGACAGGCGAAATCGATCAAGC TGGATGCCTCGGGCCACGAAGCGGTGCAGCTAAAGGCGATCGTGATCGATGAAAAATAA
Upstream 100 bases:
>100_bases GGTTCTCACGAAATCACGCCGGTTCATGACACACAGCATAACGCGGGGCTAACCAAGACGCCACGAAGAGCGTCATACTC ATCGTGAAGGAGACGTGTGC
Downstream 100 bases:
>100_bases GATCGCAACGAGCCGCGACCGTGAGAAGGTGTGAAAAATCTCCGCTGCCAGCCTAAAACATTTAAGGCATGAAATGTTTT GGCTGATAATCTAAGCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MKAVAAAVWILAAGGMAQGFQAAQAPAKGSIEGQVVNLKGGAPLKKANVQLNMINPGGPTPMGGRGQVQIRKATETDDQG RFSFPGLDPGKYRLSADRQGFLHQNYGARKFSGSGTPVLVGDGQSVKGIVFSMNPQAVITGKVLDEDGEPVANVQVRAMR YVYRGGKKQWSQVANATTTDIGEFRLPSLEPGRYIVSSNARNTGIGPRRPQSDEPLPATPDLVYASTYYPSTLNAGTAVP IDVGGGGEIRGIDIRLVKTRVYRVRGKVTGAVNNERNAPVMVSLSQKDLPGNPIMGMANGPEGQFEIRNVPPGSYIATAQ SRGRGQEAIAIQPVDVVGSHVDGIVLTMEAGKDVQGGVKVVDATTPPEFKNLGVMLRPVGFMGMGGPGRTRVGEDLKFTL KSVPAVRYAVSVVGLPDTCYVKSIQYGGRDVTEEGIEMTSGATLDVVVSAAAAQVDAVVMDKDGKAAWNATVAVSAKDGT NIQVRTADENGILSLRGLKPGEYRLYAWEDVEPGAPSDPDFLKQYEGQAKSIKLDASGHEAVQLKAIVIDEK
Sequences:
>Translated_552_residues MKAVAAAVWILAAGGMAQGFQAAQAPAKGSIEGQVVNLKGGAPLKKANVQLNMINPGGPTPMGGRGQVQIRKATETDDQG RFSFPGLDPGKYRLSADRQGFLHQNYGARKFSGSGTPVLVGDGQSVKGIVFSMNPQAVITGKVLDEDGEPVANVQVRAMR YVYRGGKKQWSQVANATTTDIGEFRLPSLEPGRYIVSSNARNTGIGPRRPQSDEPLPATPDLVYASTYYPSTLNAGTAVP IDVGGGGEIRGIDIRLVKTRVYRVRGKVTGAVNNERNAPVMVSLSQKDLPGNPIMGMANGPEGQFEIRNVPPGSYIATAQ SRGRGQEAIAIQPVDVVGSHVDGIVLTMEAGKDVQGGVKVVDATTPPEFKNLGVMLRPVGFMGMGGPGRTRVGEDLKFTL KSVPAVRYAVSVVGLPDTCYVKSIQYGGRDVTEEGIEMTSGATLDVVVSAAAAQVDAVVMDKDGKAAWNATVAVSAKDGT NIQVRTADENGILSLRGLKPGEYRLYAWEDVEPGAPSDPDFLKQYEGQAKSIKLDASGHEAVQLKAIVIDEK >Mature_552_residues MKAVAAAVWILAAGGMAQGFQAAQAPAKGSIEGQVVNLKGGAPLKKANVQLNMINPGGPTPMGGRGQVQIRKATETDDQG RFSFPGLDPGKYRLSADRQGFLHQNYGARKFSGSGTPVLVGDGQSVKGIVFSMNPQAVITGKVLDEDGEPVANVQVRAMR YVYRGGKKQWSQVANATTTDIGEFRLPSLEPGRYIVSSNARNTGIGPRRPQSDEPLPATPDLVYASTYYPSTLNAGTAVP IDVGGGGEIRGIDIRLVKTRVYRVRGKVTGAVNNERNAPVMVSLSQKDLPGNPIMGMANGPEGQFEIRNVPPGSYIATAQ SRGRGQEAIAIQPVDVVGSHVDGIVLTMEAGKDVQGGVKVVDATTPPEFKNLGVMLRPVGFMGMGGPGRTRVGEDLKFTL KSVPAVRYAVSVVGLPDTCYVKSIQYGGRDVTEEGIEMTSGATLDVVVSAAAAQVDAVVMDKDGKAAWNATVAVSAKDGT NIQVRTADENGILSLRGLKPGEYRLYAWEDVEPGAPSDPDFLKQYEGQAKSIKLDASGHEAVQLKAIVIDEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58243; Mature: 58243
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVAAAVWILAAGGMAQGFQAAQAPAKGSIEGQVVNLKGGAPLKKANVQLNMINPGGPT CCHHHEEEEEHCCCCHHHCCHHHCCCCCCCCCEEEEEECCCCCEEECEEEEEEECCCCCC PMGGRGQVQIRKATETDDQGRFSFPGLDPGKYRLSADRQGFLHQNYGARKFSGSGTPVLV CCCCCCEEEEEECCCCCCCCEEECCCCCCCCEEECCCCCCCEECCCCCEEECCCCCEEEE GDGQSVKGIVFSMNPQAVITGKVLDEDGEPVANVQVRAMRYVYRGGKKQWSQVANATTTD ECCCCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEHHHHHCCHHHHHHHHCCCCCC IGEFRLPSLEPGRYIVSSNARNTGIGPRRPQSDEPLPATPDLVYASTYYPSTLNAGTAVP CCCEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEE IDVGGGGEIRGIDIRLVKTRVYRVRGKVTGAVNNERNAPVMVSLSQKDLPGNPIMGMANG EEECCCCEEEEEEEEEEEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCEEECCCC PEGQFEIRNVPPGSYIATAQSRGRGQEAIAIQPVDVVGSHVDGIVLTMEAGKDVQGGVKV CCCCEEEECCCCCCEEEECHHCCCCCCEEEEECHHHHCCCCCEEEEEEECCCCCCCCEEE VDATTPPEFKNLGVMLRPVGFMGMGGPGRTRVGEDLKFTLKSVPAVRYAVSVVGLPDTCY EECCCCCCHHCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCCEE VKSIQYGGRDVTEEGIEMTSGATLDVVVSAAAAQVDAVVMDKDGKAAWNATVAVSAKDGT EEEEECCCCCCCHHCCEECCCCEEEEEEEHHHHEEEEEEEECCCCEEEEEEEEEEECCCC NIQVRTADENGILSLRGLKPGEYRLYAWEDVEPGAPSDPDFLKQYEGQAKSIKLDASGHE EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCC AVQLKAIVIDEK EEEEEEEEEECC >Mature Secondary Structure MKAVAAAVWILAAGGMAQGFQAAQAPAKGSIEGQVVNLKGGAPLKKANVQLNMINPGGPT CCHHHEEEEEHCCCCHHHCCHHHCCCCCCCCCEEEEEECCCCCEEECEEEEEEECCCCCC PMGGRGQVQIRKATETDDQGRFSFPGLDPGKYRLSADRQGFLHQNYGARKFSGSGTPVLV CCCCCCEEEEEECCCCCCCCEEECCCCCCCCEEECCCCCCCEECCCCCEEECCCCCEEEE GDGQSVKGIVFSMNPQAVITGKVLDEDGEPVANVQVRAMRYVYRGGKKQWSQVANATTTD ECCCCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEHHHHHCCHHHHHHHHCCCCCC IGEFRLPSLEPGRYIVSSNARNTGIGPRRPQSDEPLPATPDLVYASTYYPSTLNAGTAVP CCCEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEE IDVGGGGEIRGIDIRLVKTRVYRVRGKVTGAVNNERNAPVMVSLSQKDLPGNPIMGMANG EEECCCCEEEEEEEEEEEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCEEECCCC PEGQFEIRNVPPGSYIATAQSRGRGQEAIAIQPVDVVGSHVDGIVLTMEAGKDVQGGVKV CCCCEEEECCCCCCEEEECHHCCCCCCEEEEECHHHHCCCCCEEEEEEECCCCCCCCEEE VDATTPPEFKNLGVMLRPVGFMGMGGPGRTRVGEDLKFTLKSVPAVRYAVSVVGLPDTCY EECCCCCCHHCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCCEE VKSIQYGGRDVTEEGIEMTSGATLDVVVSAAAAQVDAVVMDKDGKAAWNATVAVSAKDGT EEEEECCCCCCCHHCCEECCCCEEEEEEEHHHHEEEEEEEECCCCEEEEEEEEEEECCCC NIQVRTADENGILSLRGLKPGEYRLYAWEDVEPGAPSDPDFLKQYEGQAKSIKLDASGHE EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCC AVQLKAIVIDEK EEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA