| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621718
Identifier: 116621718
GI number: 116621718
Start: 3281944
End: 3282897
Strand: Direct
Name: 116621718
Synonym: Acid_2600
Alternate gene names: NA
Gene position: 3281944-3282897 (Clockwise)
Preceding gene: 116621716
Following gene: 116621720
Centisome position: 32.93
GC content: 62.05
Gene sequence:
>954_bases ATGCGGATACGAGTGTTGTATCACGACCACTGTTTTGACGGGGCGGCGTCGGCTGCCTACTTCAGCCGTTTCATCGCGGG TGCGGTCCACCCGGATGCGGAATTTCAATACACGGGCATGGCCCACAAGGCCTCCCAGATGTTTGACCACTCGCTCTTCG ATGGCGATGAAAATGCCATCGTCGATTTCAAGTATTCCAGCGACCCCAAGCTCACCTGGTGGTTCGACCATCACCAGAGC GCCTTCCTCAATGCCGAGGACCAGGAGCACTTCCGCCGCGATACCAGCGGCCGGAAACTGTACGACCCGAGTTACAAATC CTGTACGTCATTCATCTGCCGCGTCGGGCAGGATCGCTTCGGCTTCCGCGCCCCTGATCTCGACGACCTCGTCCACTGGT CGCTCATCATCGATGGCGCGCAGTATCCCGACGCGCGCACGGCCGTCGAACTTGGCGCCCCGGCCATGAAGCTCACGCTC GTCATCGAGGCCGCCAAAGGCAGCGATGTCGTGCAGAAAATCATCGGCTGGATGCAGCACCGCCAGCTCTCGGAGATCAT CGCCGAGCCGGAAATCCAGGCCATCTACGAGCCCCTCTATCGCCGCCACGTCGAGTCCATCGATCTCATCCGCACTCGCG CCCACCAGGACGATGGCGTCATCTTCTTCGACCTCGCCGGCTACGACGTGGAGGGCTACAACAAGTTCATCCCCTACTAC CTCTTCCCGGATTCCACCTACACGGTGTCCGTGACGCCCTCCAGCTTCCGCACCAAGATCTCCGTGGGCTCCAATCCCTG GACACCCGTGGAACCCAAGCACAACCTCGCGACTATCTGTGAACGCTACGGCGGCGGCGGCCACGCCCGCGTCGGCGCCA TCAGCCTCGCCCCGGGCGAGCTATCCCGCGCCCGCGAAGTCGCCGCCGAGATCGTCGCCGAACTAAAAACCTAG
Upstream 100 bases:
>100_bases CCAGGTTGTATTGGTCCCAGGAAGGGATCGTTCGCATACCCTACAGTTGCATTTCTTCTCCCTTTCAGGCAAGCTGGTAG GTTTTCCATTCTTAAAATCC
Downstream 100 bases:
>100_bases CTCGAACTCGCCCTCGCTTTCATCAGAGCCGCGACCGCAAGGGAGCGATCCCGTAACACGTGTAAGCCGAAGCTCAGCGC CGCTGCCCGAGCGCTACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MRIRVLYHDHCFDGAASAAYFSRFIAGAVHPDAEFQYTGMAHKASQMFDHSLFDGDENAIVDFKYSSDPKLTWWFDHHQS AFLNAEDQEHFRRDTSGRKLYDPSYKSCTSFICRVGQDRFGFRAPDLDDLVHWSLIIDGAQYPDARTAVELGAPAMKLTL VIEAAKGSDVVQKIIGWMQHRQLSEIIAEPEIQAIYEPLYRRHVESIDLIRTRAHQDDGVIFFDLAGYDVEGYNKFIPYY LFPDSTYTVSVTPSSFRTKISVGSNPWTPVEPKHNLATICERYGGGGHARVGAISLAPGELSRAREVAAEIVAELKT
Sequences:
>Translated_317_residues MRIRVLYHDHCFDGAASAAYFSRFIAGAVHPDAEFQYTGMAHKASQMFDHSLFDGDENAIVDFKYSSDPKLTWWFDHHQS AFLNAEDQEHFRRDTSGRKLYDPSYKSCTSFICRVGQDRFGFRAPDLDDLVHWSLIIDGAQYPDARTAVELGAPAMKLTL VIEAAKGSDVVQKIIGWMQHRQLSEIIAEPEIQAIYEPLYRRHVESIDLIRTRAHQDDGVIFFDLAGYDVEGYNKFIPYY LFPDSTYTVSVTPSSFRTKISVGSNPWTPVEPKHNLATICERYGGGGHARVGAISLAPGELSRAREVAAEIVAELKT >Mature_317_residues MRIRVLYHDHCFDGAASAAYFSRFIAGAVHPDAEFQYTGMAHKASQMFDHSLFDGDENAIVDFKYSSDPKLTWWFDHHQS AFLNAEDQEHFRRDTSGRKLYDPSYKSCTSFICRVGQDRFGFRAPDLDDLVHWSLIIDGAQYPDARTAVELGAPAMKLTL VIEAAKGSDVVQKIIGWMQHRQLSEIIAEPEIQAIYEPLYRRHVESIDLIRTRAHQDDGVIFFDLAGYDVEGYNKFIPYY LFPDSTYTVSVTPSSFRTKISVGSNPWTPVEPKHNLATICERYGGGGHARVGAISLAPGELSRAREVAAEIVAELKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35748; Mature: 35748
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRVLYHDHCFDGAASAAYFSRFIAGAVHPDAEFQYTGMAHKASQMFDHSLFDGDENAI CEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEE VDFKYSSDPKLTWWFDHHQSAFLNAEDQEHFRRDTSGRKLYDPSYKSCTSFICRVGQDRF EEEEECCCCCEEEEEECCCCEECCCCHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCCC GFRAPDLDDLVHWSLIIDGAQYPDARTAVELGAPAMKLTLVIEAAKGSDVVQKIIGWMQH CCCCCCHHHHHEEEEEECCCCCCCHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHH RQLSEIIAEPEIQAIYEPLYRRHVESIDLIRTRAHQDDGVIFFDLAGYDVEGYNKFIPYY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEE LFPDSTYTVSVTPSSFRTKISVGSNPWTPVEPKHNLATICERYGGGGHARVGAISLAPGE ECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCH LSRAREVAAEIVAELKT HHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIRVLYHDHCFDGAASAAYFSRFIAGAVHPDAEFQYTGMAHKASQMFDHSLFDGDENAI CEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEE VDFKYSSDPKLTWWFDHHQSAFLNAEDQEHFRRDTSGRKLYDPSYKSCTSFICRVGQDRF EEEEECCCCCEEEEEECCCCEECCCCHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCCC GFRAPDLDDLVHWSLIIDGAQYPDARTAVELGAPAMKLTLVIEAAKGSDVVQKIIGWMQH CCCCCCHHHHHEEEEEECCCCCCCHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHH RQLSEIIAEPEIQAIYEPLYRRHVESIDLIRTRAHQDDGVIFFDLAGYDVEGYNKFIPYY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEE LFPDSTYTVSVTPSSFRTKISVGSNPWTPVEPKHNLATICERYGGGGHARVGAISLAPGE ECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCH LSRAREVAAEIVAELKT HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA