Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116621718

Identifier: 116621718

GI number: 116621718

Start: 3281944

End: 3282897

Strand: Direct

Name: 116621718

Synonym: Acid_2600

Alternate gene names: NA

Gene position: 3281944-3282897 (Clockwise)

Preceding gene: 116621716

Following gene: 116621720

Centisome position: 32.93

GC content: 62.05

Gene sequence:

>954_bases
ATGCGGATACGAGTGTTGTATCACGACCACTGTTTTGACGGGGCGGCGTCGGCTGCCTACTTCAGCCGTTTCATCGCGGG
TGCGGTCCACCCGGATGCGGAATTTCAATACACGGGCATGGCCCACAAGGCCTCCCAGATGTTTGACCACTCGCTCTTCG
ATGGCGATGAAAATGCCATCGTCGATTTCAAGTATTCCAGCGACCCCAAGCTCACCTGGTGGTTCGACCATCACCAGAGC
GCCTTCCTCAATGCCGAGGACCAGGAGCACTTCCGCCGCGATACCAGCGGCCGGAAACTGTACGACCCGAGTTACAAATC
CTGTACGTCATTCATCTGCCGCGTCGGGCAGGATCGCTTCGGCTTCCGCGCCCCTGATCTCGACGACCTCGTCCACTGGT
CGCTCATCATCGATGGCGCGCAGTATCCCGACGCGCGCACGGCCGTCGAACTTGGCGCCCCGGCCATGAAGCTCACGCTC
GTCATCGAGGCCGCCAAAGGCAGCGATGTCGTGCAGAAAATCATCGGCTGGATGCAGCACCGCCAGCTCTCGGAGATCAT
CGCCGAGCCGGAAATCCAGGCCATCTACGAGCCCCTCTATCGCCGCCACGTCGAGTCCATCGATCTCATCCGCACTCGCG
CCCACCAGGACGATGGCGTCATCTTCTTCGACCTCGCCGGCTACGACGTGGAGGGCTACAACAAGTTCATCCCCTACTAC
CTCTTCCCGGATTCCACCTACACGGTGTCCGTGACGCCCTCCAGCTTCCGCACCAAGATCTCCGTGGGCTCCAATCCCTG
GACACCCGTGGAACCCAAGCACAACCTCGCGACTATCTGTGAACGCTACGGCGGCGGCGGCCACGCCCGCGTCGGCGCCA
TCAGCCTCGCCCCGGGCGAGCTATCCCGCGCCCGCGAAGTCGCCGCCGAGATCGTCGCCGAACTAAAAACCTAG

Upstream 100 bases:

>100_bases
CCAGGTTGTATTGGTCCCAGGAAGGGATCGTTCGCATACCCTACAGTTGCATTTCTTCTCCCTTTCAGGCAAGCTGGTAG
GTTTTCCATTCTTAAAATCC

Downstream 100 bases:

>100_bases
CTCGAACTCGCCCTCGCTTTCATCAGAGCCGCGACCGCAAGGGAGCGATCCCGTAACACGTGTAAGCCGAAGCTCAGCGC
CGCTGCCCGAGCGCTACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MRIRVLYHDHCFDGAASAAYFSRFIAGAVHPDAEFQYTGMAHKASQMFDHSLFDGDENAIVDFKYSSDPKLTWWFDHHQS
AFLNAEDQEHFRRDTSGRKLYDPSYKSCTSFICRVGQDRFGFRAPDLDDLVHWSLIIDGAQYPDARTAVELGAPAMKLTL
VIEAAKGSDVVQKIIGWMQHRQLSEIIAEPEIQAIYEPLYRRHVESIDLIRTRAHQDDGVIFFDLAGYDVEGYNKFIPYY
LFPDSTYTVSVTPSSFRTKISVGSNPWTPVEPKHNLATICERYGGGGHARVGAISLAPGELSRAREVAAEIVAELKT

Sequences:

>Translated_317_residues
MRIRVLYHDHCFDGAASAAYFSRFIAGAVHPDAEFQYTGMAHKASQMFDHSLFDGDENAIVDFKYSSDPKLTWWFDHHQS
AFLNAEDQEHFRRDTSGRKLYDPSYKSCTSFICRVGQDRFGFRAPDLDDLVHWSLIIDGAQYPDARTAVELGAPAMKLTL
VIEAAKGSDVVQKIIGWMQHRQLSEIIAEPEIQAIYEPLYRRHVESIDLIRTRAHQDDGVIFFDLAGYDVEGYNKFIPYY
LFPDSTYTVSVTPSSFRTKISVGSNPWTPVEPKHNLATICERYGGGGHARVGAISLAPGELSRAREVAAEIVAELKT
>Mature_317_residues
MRIRVLYHDHCFDGAASAAYFSRFIAGAVHPDAEFQYTGMAHKASQMFDHSLFDGDENAIVDFKYSSDPKLTWWFDHHQS
AFLNAEDQEHFRRDTSGRKLYDPSYKSCTSFICRVGQDRFGFRAPDLDDLVHWSLIIDGAQYPDARTAVELGAPAMKLTL
VIEAAKGSDVVQKIIGWMQHRQLSEIIAEPEIQAIYEPLYRRHVESIDLIRTRAHQDDGVIFFDLAGYDVEGYNKFIPYY
LFPDSTYTVSVTPSSFRTKISVGSNPWTPVEPKHNLATICERYGGGGHARVGAISLAPGELSRAREVAAEIVAELKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35748; Mature: 35748

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRVLYHDHCFDGAASAAYFSRFIAGAVHPDAEFQYTGMAHKASQMFDHSLFDGDENAI
CEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEE
VDFKYSSDPKLTWWFDHHQSAFLNAEDQEHFRRDTSGRKLYDPSYKSCTSFICRVGQDRF
EEEEECCCCCEEEEEECCCCEECCCCHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCCC
GFRAPDLDDLVHWSLIIDGAQYPDARTAVELGAPAMKLTLVIEAAKGSDVVQKIIGWMQH
CCCCCCHHHHHEEEEEECCCCCCCHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHH
RQLSEIIAEPEIQAIYEPLYRRHVESIDLIRTRAHQDDGVIFFDLAGYDVEGYNKFIPYY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEE
LFPDSTYTVSVTPSSFRTKISVGSNPWTPVEPKHNLATICERYGGGGHARVGAISLAPGE
ECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCH
LSRAREVAAEIVAELKT
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIRVLYHDHCFDGAASAAYFSRFIAGAVHPDAEFQYTGMAHKASQMFDHSLFDGDENAI
CEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEE
VDFKYSSDPKLTWWFDHHQSAFLNAEDQEHFRRDTSGRKLYDPSYKSCTSFICRVGQDRF
EEEEECCCCCEEEEEECCCCEECCCCHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCCC
GFRAPDLDDLVHWSLIIDGAQYPDARTAVELGAPAMKLTLVIEAAKGSDVVQKIIGWMQH
CCCCCCHHHHHEEEEEECCCCCCCHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHH
RQLSEIIAEPEIQAIYEPLYRRHVESIDLIRTRAHQDDGVIFFDLAGYDVEGYNKFIPYY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEE
LFPDSTYTVSVTPSSFRTKISVGSNPWTPVEPKHNLATICERYGGGGHARVGAISLAPGE
ECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCH
LSRAREVAAEIVAELKT
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA