| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621699
Identifier: 116621699
GI number: 116621699
Start: 3263339
End: 3265021
Strand: Reverse
Name: 116621699
Synonym: Acid_2581
Alternate gene names: NA
Gene position: 3265021-3263339 (Counterclockwise)
Preceding gene: 116621701
Following gene: 116621697
Centisome position: 32.76
GC content: 64.77
Gene sequence:
>1683_bases TTGTCACCAACTCCCCGCGTTTTTCTCGGACTCCTTTTGGCATCCGGGCTTTCCGCCCAGTTCCACGGACTCTCATCGAC TGCGGATGGAACGTCGGTCTACTTCGCCTCCACGCTGCGGCTCAAAGGAGCACCACCGCTGCTCAACGGCAAGATTTTCG TAGCCAGGCAGGATGGAGTGAGCCTGTATCGCGCGCGCGAACGCACCGCACCGCCCGCCAACTCGCCTGCGTGCACCGTG GGCGGGTTCTCCGATTACCTTGGCGCGGAGACGGCCGCGAATGGCGTGGTCGCGCTCGCTTATGGGAGCAGCGGGGTGGG AGGCTGCTCGTATCCGCCGAACGCGTCCTTCACGCAGATCACGACCGCCTCAGGCGACACGAGCGTGCCCGGCATCGCAC GGCTCAGTCCGAATGGCCGGTACGCGTTGGTCTATCTCGCCGCTACCTCGCGTCCGGGGAGTGCGTTTGCGCTGTCCATT CTTGATGTTCAAAGCGGCGCGCAAACTCCGATCGCGGTCCCGGCACCGCCGTTTCCGCAGTACGTTTCGATGCCGCCGGC AGACGCGCGGGTGATCGCGAACGACGGCACCGCCATCTTAGGCGTCACGGACGGCAGCACAAAGAACAGCGGCTATCTCT TGAAGCCCAGCGCGGGCGCGCAGTCCTTTCCGGTGGCAGACGGGCTGCCGCTCATCATCGACGCGGACGCTGCGAAGGTG CTTTATCAGCGGCAGGGCGGACTCTACCTGTTCGACCTTCATACCTCCGGTTCCACGCTGCTGATGTCCGCCGCGCAGTC CGCGTCCGGCTTCCGAATGAGTGACGACGCGCGCCGGCTTCTCTATATCGGCGACGGGCAGGTTCACCTGCTGGATACCA CGACGCTGGTGGATCGCGCGCTGACCAACGACGCGGCGAAGGTCGCGGAGGCGACGATTTCGGGCGACGGCAAGGTGGTT TATGCGGTCACGGTAGTAGGCCGGCTTTTGAAGATCGATGTGGCCAGCGGCGCGGCCATCGAAGTGATCGGGCGCACCCC GTACCTCAGCGCGTTCGGCAGAAGCTTCCTTCCGGGGCTGACCGCGACGGTGAGCGCCAGCGGCCTCTCCGACACGGTCA TCAATGGAACGGTGCCGCTCAATGACTGGCTGGGGAACGTAACGATGTGGATCGGCGATCGCAAAGTTCCCGTCATCCAA CTCACGCCATCGAGCGTCAGCATTCTTGTGCCGTGGAACGTGCAGCTTGGCGGCGGGCCGATTCGCATTCTGGCGGAGGC GCCGGGAGATCACACGCCGTTCTATTTTCCGGAGGCGGAGGCGACCGTCGAAGCCGACGGTCCGCGCGCCGGCGCGATCG CGCGTCAGGACTGGCAGCCGACCTACTCAGGACCCGTGAACACGGGGGAGATCATCCACGTGTACGCCGTCGGCTTCGGT CCGGTCGCGCCCGAAGTTCCCGATGGCGCGGCGGCGCCTGCGGCCGAACCGCTCGCGCGGCTCACGCAATCGCTCACCTG CTCGAACGCCGAAATCCTCTACGCGGGCTTGGCGCCATATGCCGTGGAGCGCGTTTACCAACTCGACATCCGCATCGGTC CGACGCCCGGCTATCAGAAATTCACCTGCACTCTGGGCAACGGCGCCCGGTTCGTATTTCTGACGTTGAATGTAGTGCAA TGA
Upstream 100 bases:
>100_bases GGAGGCGATATCATCGGCGAGCGGCTGCATGAGGACAGTGTCAACCATCATAGTTGATCATGTCAACTACTTTGACGTCC CCATGGTGATATCGTGAAAC
Downstream 100 bases:
>100_bases GCTGTATTGCTGTGCGTTGGGAAGGCCTTTTCCCGCAGAGGCCGCAGAGATCGCAATGTACTACCGCGCATTTGTGTGCT CGCAGACCTCGAAGATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MSPTPRVFLGLLLASGLSAQFHGLSSTADGTSVYFASTLRLKGAPPLLNGKIFVARQDGVSLYRARERTAPPANSPACTV GGFSDYLGAETAANGVVALAYGSSGVGGCSYPPNASFTQITTASGDTSVPGIARLSPNGRYALVYLAATSRPGSAFALSI LDVQSGAQTPIAVPAPPFPQYVSMPPADARVIANDGTAILGVTDGSTKNSGYLLKPSAGAQSFPVADGLPLIIDADAAKV LYQRQGGLYLFDLHTSGSTLLMSAAQSASGFRMSDDARRLLYIGDGQVHLLDTTTLVDRALTNDAAKVAEATISGDGKVV YAVTVVGRLLKIDVASGAAIEVIGRTPYLSAFGRSFLPGLTATVSASGLSDTVINGTVPLNDWLGNVTMWIGDRKVPVIQ LTPSSVSILVPWNVQLGGGPIRILAEAPGDHTPFYFPEAEATVEADGPRAGAIARQDWQPTYSGPVNTGEIIHVYAVGFG PVAPEVPDGAAAPAAEPLARLTQSLTCSNAEILYAGLAPYAVERVYQLDIRIGPTPGYQKFTCTLGNGARFVFLTLNVVQ
Sequences:
>Translated_560_residues MSPTPRVFLGLLLASGLSAQFHGLSSTADGTSVYFASTLRLKGAPPLLNGKIFVARQDGVSLYRARERTAPPANSPACTV GGFSDYLGAETAANGVVALAYGSSGVGGCSYPPNASFTQITTASGDTSVPGIARLSPNGRYALVYLAATSRPGSAFALSI LDVQSGAQTPIAVPAPPFPQYVSMPPADARVIANDGTAILGVTDGSTKNSGYLLKPSAGAQSFPVADGLPLIIDADAAKV LYQRQGGLYLFDLHTSGSTLLMSAAQSASGFRMSDDARRLLYIGDGQVHLLDTTTLVDRALTNDAAKVAEATISGDGKVV YAVTVVGRLLKIDVASGAAIEVIGRTPYLSAFGRSFLPGLTATVSASGLSDTVINGTVPLNDWLGNVTMWIGDRKVPVIQ LTPSSVSILVPWNVQLGGGPIRILAEAPGDHTPFYFPEAEATVEADGPRAGAIARQDWQPTYSGPVNTGEIIHVYAVGFG PVAPEVPDGAAAPAAEPLARLTQSLTCSNAEILYAGLAPYAVERVYQLDIRIGPTPGYQKFTCTLGNGARFVFLTLNVVQ >Mature_559_residues SPTPRVFLGLLLASGLSAQFHGLSSTADGTSVYFASTLRLKGAPPLLNGKIFVARQDGVSLYRARERTAPPANSPACTVG GFSDYLGAETAANGVVALAYGSSGVGGCSYPPNASFTQITTASGDTSVPGIARLSPNGRYALVYLAATSRPGSAFALSIL DVQSGAQTPIAVPAPPFPQYVSMPPADARVIANDGTAILGVTDGSTKNSGYLLKPSAGAQSFPVADGLPLIIDADAAKVL YQRQGGLYLFDLHTSGSTLLMSAAQSASGFRMSDDARRLLYIGDGQVHLLDTTTLVDRALTNDAAKVAEATISGDGKVVY AVTVVGRLLKIDVASGAAIEVIGRTPYLSAFGRSFLPGLTATVSASGLSDTVINGTVPLNDWLGNVTMWIGDRKVPVIQL TPSSVSILVPWNVQLGGGPIRILAEAPGDHTPFYFPEAEATVEADGPRAGAIARQDWQPTYSGPVNTGEIIHVYAVGFGP VAPEVPDGAAAPAAEPLARLTQSLTCSNAEILYAGLAPYAVERVYQLDIRIGPTPGYQKFTCTLGNGARFVFLTLNVVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57977; Mature: 57846
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTPRVFLGLLLASGLSAQFHGLSSTADGTSVYFASTLRLKGAPPLLNGKIFVARQDGV CCCCHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEEEEEECCCCCEECCEEEEEECCCC SLYRARERTAPPANSPACTVGGFSDYLGAETAANGVVALAYGSSGVGGCSYPPNASFTQI HHHHHHHHCCCCCCCCEEEECCCHHHCCCHHHCCCEEEEEECCCCCCCCCCCCCCCEEEE TTASGDTSVPGIARLSPNGRYALVYLAATSRPGSAFALSILDVQSGAQTPIAVPAPPFPQ EECCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCEECCCCCCCH YVSMPPADARVIANDGTAILGVTDGSTKNSGYLLKPSAGAQSFPVADGLPLIIDADAAKV HCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEECCHHHH LYQRQGGLYLFDLHTSGSTLLMSAAQSASGFRMSDDARRLLYIGDGQVHLLDTTTLVDRA HHCCCCCEEEEEEECCCCEEEEEECCCCCCCEECCCCCEEEEEECCEEEEEEHHHHHHHH LTNDAAKVAEATISGDGKVVYAVTVVGRLLKIDVASGAAIEVIGRTPYLSAFGRSFLPGL HCCCHHHHEEEEECCCCCEEEEEHHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHCCCC TATVSASGLSDTVINGTVPLNDWLGNVTMWIGDRKVPVIQLTPSSVSILVPWNVQLGGGP EEEEECCCCCCEEEECEEEHHHCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCE IRILAEAPGDHTPFYFPEAEATVEADGPRAGAIARQDWQPTYSGPVNTGEIIHVYAVGFG EEEEEECCCCCCCEECCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEECC PVAPEVPDGAAAPAAEPLARLTQSLTCSNAEILYAGLAPYAVERVYQLDIRIGPTPGYQK CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHEEEEEEEEEECCCCCCCE FTCTLGNGARFVFLTLNVVQ EEEEECCCCEEEEEEEEECC >Mature Secondary Structure SPTPRVFLGLLLASGLSAQFHGLSSTADGTSVYFASTLRLKGAPPLLNGKIFVARQDGV CCCHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEEEEEECCCCCEECCEEEEEECCCC SLYRARERTAPPANSPACTVGGFSDYLGAETAANGVVALAYGSSGVGGCSYPPNASFTQI HHHHHHHHCCCCCCCCEEEECCCHHHCCCHHHCCCEEEEEECCCCCCCCCCCCCCCEEEE TTASGDTSVPGIARLSPNGRYALVYLAATSRPGSAFALSILDVQSGAQTPIAVPAPPFPQ EECCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCEECCCCCCCH YVSMPPADARVIANDGTAILGVTDGSTKNSGYLLKPSAGAQSFPVADGLPLIIDADAAKV HCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEECCHHHH LYQRQGGLYLFDLHTSGSTLLMSAAQSASGFRMSDDARRLLYIGDGQVHLLDTTTLVDRA HHCCCCCEEEEEEECCCCEEEEEECCCCCCCEECCCCCEEEEEECCEEEEEEHHHHHHHH LTNDAAKVAEATISGDGKVVYAVTVVGRLLKIDVASGAAIEVIGRTPYLSAFGRSFLPGL HCCCHHHHEEEEECCCCCEEEEEHHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHCCCC TATVSASGLSDTVINGTVPLNDWLGNVTMWIGDRKVPVIQLTPSSVSILVPWNVQLGGGP EEEEECCCCCCEEEECEEEHHHCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCE IRILAEAPGDHTPFYFPEAEATVEADGPRAGAIARQDWQPTYSGPVNTGEIIHVYAVGFG EEEEEECCCCCCCEECCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEECC PVAPEVPDGAAAPAAEPLARLTQSLTCSNAEILYAGLAPYAVERVYQLDIRIGPTPGYQK CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHEEEEEEEEEECCCCCCCE FTCTLGNGARFVFLTLNVVQ EEEEECCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA