| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621647
Identifier: 116621647
GI number: 116621647
Start: 3208475
End: 3208834
Strand: Reverse
Name: 116621647
Synonym: Acid_2529
Alternate gene names: NA
Gene position: 3208834-3208475 (Counterclockwise)
Preceding gene: 116621650
Following gene: 116621646
Centisome position: 32.2
GC content: 63.33
Gene sequence:
>360_bases ATGTTCGGTCTCGGCCCCGCGACGAAGATCTACATCTGCCTCGATGCCGTTGACATGCGAAAAGGCTTCGACGGCTTGTA CGGACTGGTGCGTGACCACTTGGGGCAAGATCCTCAGAGCGGTCACCTGTTTCTGTTCACCAACCGCTCGCACACGCGCC TGAAGGCGCTGGCCTGGGACGGTAGTGGATTGTGGGTCTGCGCCAAGCGTCTGGAACGCGGCCGCTTTGGGTGGCCCGCC GGGAACGGGACGCGTAGCGTGTTGATGCGTCCCGAAGAGTTGGCGATGCTGATCAACGGCATGGATCTGGCGCAGGCGCG CCCGCGAAAGAACTGGCTCGGCCGCACACCGGCAGCATAG
Upstream 100 bases:
>100_bases TTCGCACTGGTGCTGCGCAACGGTCGTCGCATAGAGACCAACTGGAACTTCCGCGATGCCGACCTCGCCCGCCTGATCCG CATCGCCGACTCTCAGTAAC
Downstream 100 bases:
>100_bases CCGCCGAAACATTTTCCGCTCTGTACGTAGTGGGACGCAATACCTGCAAACATTGGCGCAAATGCTCAGAAAGTGCTGGA ATCGAGCACGGAGTTCGCGT
Product: IS66 Orf2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MFGLGPATKIYICLDAVDMRKGFDGLYGLVRDHLGQDPQSGHLFLFTNRSHTRLKALAWDGSGLWVCAKRLERGRFGWPA GNGTRSVLMRPEELAMLINGMDLAQARPRKNWLGRTPAA
Sequences:
>Translated_119_residues MFGLGPATKIYICLDAVDMRKGFDGLYGLVRDHLGQDPQSGHLFLFTNRSHTRLKALAWDGSGLWVCAKRLERGRFGWPA GNGTRSVLMRPEELAMLINGMDLAQARPRKNWLGRTPAA >Mature_119_residues MFGLGPATKIYICLDAVDMRKGFDGLYGLVRDHLGQDPQSGHLFLFTNRSHTRLKALAWDGSGLWVCAKRLERGRFGWPA GNGTRSVLMRPEELAMLINGMDLAQARPRKNWLGRTPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 34 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008878 [H]
Pfam domain/function: PF05717 Transposase_34 [H]
EC number: NA
Molecular weight: Translated: 13269; Mature: 13269
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLGPATKIYICLDAVDMRKGFDGLYGLVRDHLGQDPQSGHLFLFTNRSHTRLKALAWD CCCCCCCCEEEEEEECHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEC GSGLWVCAKRLERGRFGWPAGNGTRSVLMRPEELAMLINGMDLAQARPRKNWLGRTPAA CCCHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHCCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure MFGLGPATKIYICLDAVDMRKGFDGLYGLVRDHLGQDPQSGHLFLFTNRSHTRLKALAWD CCCCCCCCEEEEEEECHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEC GSGLWVCAKRLERGRFGWPAGNGTRSVLMRPEELAMLINGMDLAQARPRKNWLGRTPAA CCCHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHCCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]