| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621444
Identifier: 116621444
GI number: 116621444
Start: 2969682
End: 2971310
Strand: Reverse
Name: 116621444
Synonym: Acid_2326
Alternate gene names: NA
Gene position: 2971310-2969682 (Counterclockwise)
Preceding gene: 116621446
Following gene: 116621443
Centisome position: 29.82
GC content: 54.7
Gene sequence:
>1629_bases ATGCGGATTCAGCACGTGGGCGTTAGATCTTCAGCCGCCCTGGTGTTCTTCACGTCCACGACGTTGTTCGTGAGTTCCGC ACACGCCCAGGGGTCGTCGCCAACTGGCCCAGAGAGCGTGGGGCCGCCGGTCGAGAATGGTGTTGTCCGCGAGCTACTTC GGAAAATCCAGGAGCAACAGAAGAGCTTAGATGAGCAGCAAAAGAGTATCGATGAACAGCAAAAGTCCTTAGCGGCGCTC ATCGGCGAACTGCAGCGACTGCTTGGCCGGGGCACGGCAACAAATTTGGCGATCGACGGCAAGCCAATTGTACCGCCGAC AACGGCAAGTGCCTCGGCGCCAAGAGCGAATGCCGCGTTGAATACCCCACCGGCGGTGACAGGTTCAGCAAGTACTCCCG TACCGCCGGTATCCGTTGTGGCATCACAGAGAAACGATGATCATTACCGAGACGGAATGGTAATCTTGGAAACCCGCGAG GACGCTAAGGTGCCTTTTCTGCTGAAATTCAACGTCAATAGCCAAGTCCGATATCTCAACACCCAAGATAGCAAAGGGAC TTTTACGGACCACCTGGGAGTTGTCAGCGCGGTTAATACGCGCAACGATATCACGGTAAATCGCTCAATGTTCATCTTAA GCGGCTACGTTTTTGACAAGAGGGCGCTATATAGCGTAACCGTCTGGACCTCCGCCGGGGCCGCTTCGATCGTCGTAGCC GGCAACATTGGCTGGCGATTCAACAAGGCCCTCACGCTCACTGGAGGTTACACTGGCGTTCCAGGCAGCCGATCACTGGT TAACACGTTCCCATTTTTTACGGCAAGCGATAGGAGCATGGCTGACAACTTCTTCCGCCCTGGGTTCACTCAGGGAGTAT GGGCGAGCGGAGAACCCGTGAAGGGGCTGAATTATTTGGCGTTCCTCGGCAACGGTCTCAATACCCTGAATATCTCGGCA AATAAGATCGATACCTTTCTGGCGGTTTCCGGCAGCGTCTGGTGGGAACCGCTGGGGCCCTATGGGCCACTCGGCAAAGA TCGCAACATGTACGATGATTATTTCGCCTCCAAAAAAGTTCGCATTCGAATTGGTACCTCGTTTACAAGATCCCGAGAGG ACCGTTTTACAAATCTCGAACAATCAAATCCCGACAACACTTCACTGTACAATTCCGACGGCGTGCTTACCTTCTCGACC GGAGCGTTTGCGCCGAGTGTAACGCTCAGCCTGGCCACGTATAGGATGTGGGCGGTTGACGGGGGCATCAAATGGAACGG GCTTGCGGTCAACGGGCAATACTTCGCGCGTTTGCTAAACGATTTCGTGGCCGACGGACCGCTTCCGCTCAAATCCACAT TCGACCATGGCGGCGAGTTCTCGGCGAGCTATTTTGCCAAGCCGAAAAAGTTGATGCCATATATCCGCGGATCGTGGGTG ATTGGGCAGTTCGGCAATTCTTATGAGTATGGTGCTGGGGCAAAGTGGTTTCCCGTTCGGACCGACCGACTCTGGCTCGC CACAGAGGTGTTCCGGGTTAACAAATCTCCTTATAGCGGGGTATTTACTCCGTATACCTTAGGTCTGACCGGCTGGGTGC CGATGGTGCAGGCATTCCTCGCTTTTTGA
Upstream 100 bases:
>100_bases AAGCTCGAGGAACGCCACAGGATGCTGCTGCAGCTTGTGACGACGCTGCAGCGGCGATGTGATGGATCATCTGCGCTAGT CGCAGGTGCAGCAACCAACC
Downstream 100 bases:
>100_bases CCACCGTCAGTTTCTGACATTCGCCTTCTTTATGGTTCTACGAAAGAAAGATCATGGGATTCGAACACACCAAAGTCGCC GAGGCGGCACTAACGACACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MRIQHVGVRSSAALVFFTSTTLFVSSAHAQGSSPTGPESVGPPVENGVVRELLRKIQEQQKSLDEQQKSIDEQQKSLAAL IGELQRLLGRGTATNLAIDGKPIVPPTTASASAPRANAALNTPPAVTGSASTPVPPVSVVASQRNDDHYRDGMVILETRE DAKVPFLLKFNVNSQVRYLNTQDSKGTFTDHLGVVSAVNTRNDITVNRSMFILSGYVFDKRALYSVTVWTSAGAASIVVA GNIGWRFNKALTLTGGYTGVPGSRSLVNTFPFFTASDRSMADNFFRPGFTQGVWASGEPVKGLNYLAFLGNGLNTLNISA NKIDTFLAVSGSVWWEPLGPYGPLGKDRNMYDDYFASKKVRIRIGTSFTRSREDRFTNLEQSNPDNTSLYNSDGVLTFST GAFAPSVTLSLATYRMWAVDGGIKWNGLAVNGQYFARLLNDFVADGPLPLKSTFDHGGEFSASYFAKPKKLMPYIRGSWV IGQFGNSYEYGAGAKWFPVRTDRLWLATEVFRVNKSPYSGVFTPYTLGLTGWVPMVQAFLAF
Sequences:
>Translated_542_residues MRIQHVGVRSSAALVFFTSTTLFVSSAHAQGSSPTGPESVGPPVENGVVRELLRKIQEQQKSLDEQQKSIDEQQKSLAAL IGELQRLLGRGTATNLAIDGKPIVPPTTASASAPRANAALNTPPAVTGSASTPVPPVSVVASQRNDDHYRDGMVILETRE DAKVPFLLKFNVNSQVRYLNTQDSKGTFTDHLGVVSAVNTRNDITVNRSMFILSGYVFDKRALYSVTVWTSAGAASIVVA GNIGWRFNKALTLTGGYTGVPGSRSLVNTFPFFTASDRSMADNFFRPGFTQGVWASGEPVKGLNYLAFLGNGLNTLNISA NKIDTFLAVSGSVWWEPLGPYGPLGKDRNMYDDYFASKKVRIRIGTSFTRSREDRFTNLEQSNPDNTSLYNSDGVLTFST GAFAPSVTLSLATYRMWAVDGGIKWNGLAVNGQYFARLLNDFVADGPLPLKSTFDHGGEFSASYFAKPKKLMPYIRGSWV IGQFGNSYEYGAGAKWFPVRTDRLWLATEVFRVNKSPYSGVFTPYTLGLTGWVPMVQAFLAF >Mature_542_residues MRIQHVGVRSSAALVFFTSTTLFVSSAHAQGSSPTGPESVGPPVENGVVRELLRKIQEQQKSLDEQQKSIDEQQKSLAAL IGELQRLLGRGTATNLAIDGKPIVPPTTASASAPRANAALNTPPAVTGSASTPVPPVSVVASQRNDDHYRDGMVILETRE DAKVPFLLKFNVNSQVRYLNTQDSKGTFTDHLGVVSAVNTRNDITVNRSMFILSGYVFDKRALYSVTVWTSAGAASIVVA GNIGWRFNKALTLTGGYTGVPGSRSLVNTFPFFTASDRSMADNFFRPGFTQGVWASGEPVKGLNYLAFLGNGLNTLNISA NKIDTFLAVSGSVWWEPLGPYGPLGKDRNMYDDYFASKKVRIRIGTSFTRSREDRFTNLEQSNPDNTSLYNSDGVLTFST GAFAPSVTLSLATYRMWAVDGGIKWNGLAVNGQYFARLLNDFVADGPLPLKSTFDHGGEFSASYFAKPKKLMPYIRGSWV IGQFGNSYEYGAGAKWFPVRTDRLWLATEVFRVNKSPYSGVFTPYTLGLTGWVPMVQAFLAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59064; Mature: 59064
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIQHVGVRSSAALVFFTSTTLFVSSAHAQGSSPTGPESVGPPVENGVVRELLRKIQEQQ CCEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH KSLDEQQKSIDEQQKSLAALIGELQRLLGRGTATNLAIDGKPIVPPTTASASAPRANAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC NTPPAVTGSASTPVPPVSVVASQRNDDHYRDGMVILETREDAKVPFLLKFNVNSQVRYLN CCCCCCCCCCCCCCCCHHHEECCCCCCCHHCCEEEEEECCCCCCCEEEEECCCCEEEEEE TQDSKGTFTDHLGVVSAVNTRNDITVNRSMFILSGYVFDKRALYSVTVWTSAGAASIVVA CCCCCCCCHHHCCCEEEECCCCCEEECCEEEEEEEEEECCCEEEEEEEEECCCCEEEEEE GNIGWRFNKALTLTGGYTGVPGSRSLVNTFPFFTASDRSMADNFFRPGFTQGVWASGEPV CCCCEEECCEEEEECCCCCCCCCCHHHHHCCCEECCCCHHHHHHCCCCCCCCCCCCCCCC KGLNYLAFLGNGLNTLNISANKIDTFLAVSGSVWWEPLGPYGPLGKDRNMYDDYFASKKV CCCEEEEECCCCCEEEEEEHHHCEEEEEECCCEEECCCCCCCCCCCCCCCHHHHHCCCEE RIRIGTSFTRSREDRFTNLEQSNPDNTSLYNSDGVLTFSTGAFAPSVTLSLATYRMWAVD EEEECCCHHHCHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEEEEEC GGIKWNGLAVNGQYFARLLNDFVADGPLPLKSTFDHGGEFSASYFAKPKKLMPYIRGSWV CCEEECEEEECHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHCCCHHHHHHHCCCEE IGQFGNSYEYGAGAKWFPVRTDRLWLATEVFRVNKSPYSGVFTPYTLGLTGWVPMVQAFL EECCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCCCEECCHHHHHHHHHHHH AF CC >Mature Secondary Structure MRIQHVGVRSSAALVFFTSTTLFVSSAHAQGSSPTGPESVGPPVENGVVRELLRKIQEQQ CCEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH KSLDEQQKSIDEQQKSLAALIGELQRLLGRGTATNLAIDGKPIVPPTTASASAPRANAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC NTPPAVTGSASTPVPPVSVVASQRNDDHYRDGMVILETREDAKVPFLLKFNVNSQVRYLN CCCCCCCCCCCCCCCCHHHEECCCCCCCHHCCEEEEEECCCCCCCEEEEECCCCEEEEEE TQDSKGTFTDHLGVVSAVNTRNDITVNRSMFILSGYVFDKRALYSVTVWTSAGAASIVVA CCCCCCCCHHHCCCEEEECCCCCEEECCEEEEEEEEEECCCEEEEEEEEECCCCEEEEEE GNIGWRFNKALTLTGGYTGVPGSRSLVNTFPFFTASDRSMADNFFRPGFTQGVWASGEPV CCCCEEECCEEEEECCCCCCCCCCHHHHHCCCEECCCCHHHHHHCCCCCCCCCCCCCCCC KGLNYLAFLGNGLNTLNISANKIDTFLAVSGSVWWEPLGPYGPLGKDRNMYDDYFASKKV CCCEEEEECCCCCEEEEEEHHHCEEEEEECCCEEECCCCCCCCCCCCCCCHHHHHCCCEE RIRIGTSFTRSREDRFTNLEQSNPDNTSLYNSDGVLTFSTGAFAPSVTLSLATYRMWAVD EEEECCCHHHCHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEEEEEC GGIKWNGLAVNGQYFARLLNDFVADGPLPLKSTFDHGGEFSASYFAKPKKLMPYIRGSWV CCEEECEEEECHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHCCCHHHHHHHCCCEE IGQFGNSYEYGAGAKWFPVRTDRLWLATEVFRVNKSPYSGVFTPYTLGLTGWVPMVQAFL EECCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCCCEECCHHHHHHHHHHHH AF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA