Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116621443

Identifier: 116621443

GI number: 116621443

Start: 2968871

End: 2969428

Strand: Reverse

Name: 116621443

Synonym: Acid_2325

Alternate gene names: NA

Gene position: 2969428-2968871 (Counterclockwise)

Preceding gene: 116621444

Following gene: 116621442

Centisome position: 29.8

GC content: 60.93

Gene sequence:

>558_bases
GTGTGGGAACCTGTAAGGGACGTGTCCACAACGTTTCGCATACTGTCCGGCCTGCCACCGTATGGCCCGTCAGCCGTGCA
GTTCAGCCCAGATGGTAGCGGCATACACCGAGAAGGATTGGTCATCGGGTTCAGTCCTGGAACTGGCGATTGGATCGGGA
ACTTTCAACGGGGCGGCACGGCATTCGACGCTGTGGTTCCGCACCCAGATGGAATGTCCGTCATCGTTGTCGCCGGGGGG
CAGGGCTACATCGTTGCCCCCTCTAGGGGAAACGTAACGATGATGTTCGGTGGCGATATCACCGGCGTTGTCGTCGCTGG
GCCGGAGCAGTTGGTCCTCTCAACCTTCACGGATTTCCGTGCCTTCGGCTCCGGAGGGCCGCAGTGGAGAACGCGCCGAA
TCTCGTGCGATGGGTTTCGATCACTGCGGGTGGAAGGCGGCGAATTGCGAGGAGAAGCCTGTACCTACGCGGGCGACATG
TGGGTAGGATTCGGCGTCCAGCTTGGTTCCGGCGAGACAACGGGCGGCGCGTACCCACGATCTTCAGAGGGAATGTAA

Upstream 100 bases:

>100_bases
CGGTGGTTTGCGCTTGATATGACGAAGTGAACTCGCCCAGCCTCCCGGACCGTCACTTTCTCCTAACCCCACTTTCCACT
CGGAATGCCGATTAGCGGGA

Downstream 100 bases:

>100_bases
CGCCACTTGCCGGGAGCTTATCGACTGGAACACGCCGCATCTTACAATGGGCACCGTAGGAATCAATATCGGCTCGCGCT
GGAGATTGCATGAAGACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MWEPVRDVSTTFRILSGLPPYGPSAVQFSPDGSGIHREGLVIGFSPGTGDWIGNFQRGGTAFDAVVPHPDGMSVIVVAGG
QGYIVAPSRGNVTMMFGGDITGVVVAGPEQLVLSTFTDFRAFGSGGPQWRTRRISCDGFRSLRVEGGELRGEACTYAGDM
WVGFGVQLGSGETTGGAYPRSSEGM

Sequences:

>Translated_185_residues
MWEPVRDVSTTFRILSGLPPYGPSAVQFSPDGSGIHREGLVIGFSPGTGDWIGNFQRGGTAFDAVVPHPDGMSVIVVAGG
QGYIVAPSRGNVTMMFGGDITGVVVAGPEQLVLSTFTDFRAFGSGGPQWRTRRISCDGFRSLRVEGGELRGEACTYAGDM
WVGFGVQLGSGETTGGAYPRSSEGM
>Mature_185_residues
MWEPVRDVSTTFRILSGLPPYGPSAVQFSPDGSGIHREGLVIGFSPGTGDWIGNFQRGGTAFDAVVPHPDGMSVIVVAGG
QGYIVAPSRGNVTMMFGGDITGVVVAGPEQLVLSTFTDFRAFGSGGPQWRTRRISCDGFRSLRVEGGELRGEACTYAGDM
WVGFGVQLGSGETTGGAYPRSSEGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19386; Mature: 19386

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWEPVRDVSTTFRILSGLPPYGPSAVQFSPDGSGIHREGLVIGFSPGTGDWIGNFQRGGT
CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEECCEEEEECCCCCCCCCCCCCCCE
AFDAVVPHPDGMSVIVVAGGQGYIVAPSRGNVTMMFGGDITGVVVAGPEQLVLSTFTDFR
EEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEEECCCEEEEEEECCHHEEEHHHHHHH
AFGSGGPQWRTRRISCDGFRSLRVEGGELRGEACTYAGDMWVGFGVQLGSGETTGGAYPR
HHCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCC
SSEGM
CCCCC
>Mature Secondary Structure
MWEPVRDVSTTFRILSGLPPYGPSAVQFSPDGSGIHREGLVIGFSPGTGDWIGNFQRGGT
CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEECCEEEEECCCCCCCCCCCCCCCE
AFDAVVPHPDGMSVIVVAGGQGYIVAPSRGNVTMMFGGDITGVVVAGPEQLVLSTFTDFR
EEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEEECCCEEEEEEECCHHEEEHHHHHHH
AFGSGGPQWRTRRISCDGFRSLRVEGGELRGEACTYAGDMWVGFGVQLGSGETTGGAYPR
HHCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCC
SSEGM
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA