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The map label for this gene is ccmO [H]

Identifier: 116621376

GI number: 116621376

Start: 2884796

End: 2885410

Strand: Reverse

Name: ccmO [H]

Synonym: Acid_2257

Alternate gene names: 116621376

Gene position: 2885410-2884796 (Counterclockwise)

Preceding gene: 116621377

Following gene: 116621371

Centisome position: 28.95

GC content: 64.07

Gene sequence:

>615_bases
TTGAACGAAGGCGCGCTCGCCTTGGTCGAAATCGGCGGCTGGTCGCCCGGCATGGTGCTGCTGGACGCCATGGAGAAGGC
CGCCGGCGTCAGCATTTTGCAGACCGAGCTGAACGATAGTCCCGGTGTCTGCCTCAAGCTATACGGCGCGCTCGGCGATG
TGCAGGCCGCCGCGCAGGCCGCCGAAGCCACCGCCGCCACGATGCGTGTCGCGGTGGTCGCGCACGTGATCCCGTCGCCC
GCGCCGGATTCCGCCAAGGCCTACGAAGCGGCCGTCGATTTCAATCCGCTGATGGAGCAATCCACTGTTCACTACCCGGA
GAAGAAGATGAATAACCATTCCCAGGCCCAGTTCGCCGTCGGCCTGATCGAGACGCAAGGTTTCACGGCCGTCTTCGAGG
CCATCGACACTGCCTTAAAGACCGCCGCCGTGGAAGTGCTCGCGCGTGAAAAGCTCGGTGGAGGCTACATCACGGTGCTG
ATTAAGGGCGATGTGGCCGCCGTCACCGCCGCCATCGAGGCCGGCAAGGCGAAAGTCGAAGGCCTCGGACGATTGATCGC
GGCCCACGTAATCGCCAGCCCCAGCGAAGGCGTACTCTCGCTACTGCCCAAGTAA

Upstream 100 bases:

>100_bases
CGGCCGCCGGCTGCGCTCCCCGGACCGCCCAACCCGCTGCGGACAAGATGGAGCAGGTGGTGCTCGAGGTGCTCCATGAG
CTCGAGAAGCGGGGGATCTT

Downstream 100 bases:

>100_bases
ATTAAGATTAGTGACCGCTCCCTGACGGTCACGGCTCGGAAGGACGGCTCGCCCTTGAAGTTGTATTACACTCCATCCGA
GCCGCGACCGTCAGGGAGCG

Product: microcompartments protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNEGALALVEIGGWSPGMVLLDAMEKAAGVSILQTELNDSPGVCLKLYGALGDVQAAAQAAEATAATMRVAVVAHVIPSP
APDSAKAYEAAVDFNPLMEQSTVHYPEKKMNNHSQAQFAVGLIETQGFTAVFEAIDTALKTAAVEVLAREKLGGGYITVL
IKGDVAAVTAAIEAGKAKVEGLGRLIAAHVIASPSEGVLSLLPK

Sequences:

>Translated_204_residues
MNEGALALVEIGGWSPGMVLLDAMEKAAGVSILQTELNDSPGVCLKLYGALGDVQAAAQAAEATAATMRVAVVAHVIPSP
APDSAKAYEAAVDFNPLMEQSTVHYPEKKMNNHSQAQFAVGLIETQGFTAVFEAIDTALKTAAVEVLAREKLGGGYITVL
IKGDVAAVTAAIEAGKAKVEGLGRLIAAHVIASPSEGVLSLLPK
>Mature_204_residues
MNEGALALVEIGGWSPGMVLLDAMEKAAGVSILQTELNDSPGVCLKLYGALGDVQAAAQAAEATAATMRVAVVAHVIPSP
APDSAKAYEAAVDFNPLMEQSTVHYPEKKMNNHSQAQFAVGLIETQGFTAVFEAIDTALKTAAVEVLAREKLGGGYITVL
IKGDVAAVTAAIEAGKAKVEGLGRLIAAHVIASPSEGVLSLLPK

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 20933; Mature: 20933

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEGALALVEIGGWSPGMVLLDAMEKAAGVSILQTELNDSPGVCLKLYGALGDVQAAAQA
CCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
AEATAATMRVAVVAHVIPSPAPDSAKAYEAAVDFNPLMEQSTVHYPEKKMNNHSQAQFAV
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCHHHCCCCCCHHEEE
GLIETQGFTAVFEAIDTALKTAAVEVLAREKLGGGYITVLIKGDVAAVTAAIEAGKAKVE
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCHHHHH
GLGRLIAAHVIASPSEGVLSLLPK
HHHHHHHHHHHCCCCCCHHHCCCC
>Mature Secondary Structure
MNEGALALVEIGGWSPGMVLLDAMEKAAGVSILQTELNDSPGVCLKLYGALGDVQAAAQA
CCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
AEATAATMRVAVVAHVIPSPAPDSAKAYEAAVDFNPLMEQSTVHYPEKKMNNHSQAQFAV
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCHHHCCCCCCHHEEE
GLIETQGFTAVFEAIDTALKTAAVEVLAREKLGGGYITVLIKGDVAAVTAAIEAGKAKVE
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCHHHHH
GLGRLIAAHVIASPSEGVLSLLPK
HHHHHHHHHHHCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2509426 [H]