Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116621373

Identifier: 116621373

GI number: 116621373

Start: 2880583

End: 2882517

Strand: Direct

Name: 116621373

Synonym: Acid_2254

Alternate gene names: NA

Gene position: 2880583-2882517 (Clockwise)

Preceding gene: 116621372

Following gene: 116621374

Centisome position: 28.91

GC content: 61.29

Gene sequence:

>1935_bases
ATGGCTACACTACCCAGCCCGAGCTTACCCGCCCCACTGCGCCGTATCTGGTATTGGGTCGCCGGCTTTGCGTTATTGGC
CGCCGCGGGGGCTTGCATCTATTACTGGATGTTCAGCCGGTTCTCGCCGTGGGACGATGATGGCTACCTCTTAATCGGTA
TCCAATCGCTGCTCAAAGGTGATCGTTTATACGATGACATCTACTCCCAATACGGACCTTTCTACTATCTATTTCATTGG
ATCGCGTATTCACTGGCGGGACTTCCCGCATCGCACGAGGCTCAACGGTTTATCGGCACCGGCTTGTGGCTCGTTTCGGC
GGGTCTCTGGGCGCGCACTACCTACCTGTTAACCAGATCGCTGCTCTGGAGCGCCTTCGGGTTTTTCGTTGGCATTAAGC
TCCTGGAATTCTTTCCGTGGTCCGCGGGGCACCCGGAAGAGATCTGCATGGCGCTGCTGGCTGCAATCGCAATTCTGGCT
TGCGGCATCACGCCGGGCAACGCCTCGAGAAACGTCATCGGGCTCGGGTTGCTTGTCGCAGCGCTTACTTTGACCAAGGT
CAACATGGGCCTGTATGCCGGCGTAGCCGTAGCGCTGTTCCTGTTTCGCATCAGCCCGCCCACAGCCTGGAGGCGGACGG
CGGAATGGCTGTTCAGCGCTGCCGCATTGCTGCTGCCCGCCGCCCTTATGGCGACGATGTTCCACTTCGATTGGGCGCGA
AACTACGCATTTGTCGCAACCGCTGCCATCGCAACGGCCATCTATGCGGCGCACCGTGTGGAGCTCGCGGTCCTGGTGAC
AGAGCGCGCCTGGCGAACCGCGGCAGTCTCGCTCCTGGCTTCCGCGCTGGCGGTGGCGCTTCCCTTCTTCTTTCGCGGAA
CTACCCTCCAGGCACTGCTTCGGATGACGGTGTTGCAGCACGCCGGGACGGCGCGGAACTGGTTTCTGGTCGCTCCCATC
GGAGCCAAGGTTGTGCTGTGTATGCTCGTGTCGGCGGGCATGCTGGCAATCGCGTATGGGCTGGTTCGGAGGACCGCGAG
GGATGTGTCCGGATGGACCGGCCCCGCGCTTCTCGGCTTGAAAGCGGCGGTCGGACTCACAGCCCTGCTGGCATTGAGCA
CGCGAAATATCCGCGCCGATAACCCAATCATCTTCTGCTACTGCGTGCCCTTCATGTGGCTAATCCTGGTGGGGCCGGAC
GATGAAACAACACGGGCGACACGAATCGGCAGAATGGCGCTCTGCTTTCTCGCGGTGTTCACTTACCTTTACGCATTTCC
CGTAGCCGGAGCGCAAGTCCTATTCGCCAGCGTGCCGGCGGCGATTGCCGCGATCGTACTGCTGCGCGATGCGGCGTCGG
AGATCGCGCGGGCAGTTCCGGCGGCGTTGCGGGCGAACGGCCTCTATCGGCTGGCGCCGGCGCTGGGATGCGTGGTGCTG
ATCGCGCTATTTGCGGTGGATATCTACGATGGCCATCGGAAGTACGCAGGCGGAGTGTCCCTGGGAATGCCCGGGGCTGC
CAGAATCCGGGTGGAGCCGCAGGAATCGGCCGCATACCGGTGGATCGCCAATAATGTTCGGTCGTGCAGTGCGCTGTACT
CGATGCCGGGCCAGTTCAGCCTGAATTTGTGGACGGCCTTGAAATCGCCGACGGATCTCACGGCGGGCAATTGGGCCGGG
CTGCTCGACAACGGGCAGCAGCAGGCCGTGGTACGGGATCTCTCGCGGTATCCCGGATTGTGCATCGTCTATACTCCGGA
GCTGGTGAAAGAGTGGGGCCGTGGACAAGATCTTTCGAAATCCCCGCTGGCCCGGTACATCCGCGAGGAGTTTGTGACGG
TCGCCGGTTCGGACGGAAACTTCATTTTGAAAAGGAAGGACCTGGCCGCTCCGGCTGTGGCTCACGCGAGTAATTCGCAG
GCCAATGATCAGTAG

Upstream 100 bases:

>100_bases
ATCCACCAGTCGAGCTTTCGAACACGTGCGCCCGGTCCAAATTGTTGCAAAGTGAGCTTCAGTCTGCGATTCTCGTTTGA
CACCCAGAGTTGCCCAGACC

Downstream 100 bases:

>100_bases
GGGCGAGGGGCCGGCAGTTCTCCAGCGAGTACTTCTCCCGGGAGTACAATACGTGCGTGCGGCGCAGAAATTTTCTTGGC
GTAGCGGGCGGGGCAGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 643

Protein sequence:

>644_residues
MATLPSPSLPAPLRRIWYWVAGFALLAAAGACIYYWMFSRFSPWDDDGYLLIGIQSLLKGDRLYDDIYSQYGPFYYLFHW
IAYSLAGLPASHEAQRFIGTGLWLVSAGLWARTTYLLTRSLLWSAFGFFVGIKLLEFFPWSAGHPEEICMALLAAIAILA
CGITPGNASRNVIGLGLLVAALTLTKVNMGLYAGVAVALFLFRISPPTAWRRTAEWLFSAAALLLPAALMATMFHFDWAR
NYAFVATAAIATAIYAAHRVELAVLVTERAWRTAAVSLLASALAVALPFFFRGTTLQALLRMTVLQHAGTARNWFLVAPI
GAKVVLCMLVSAGMLAIAYGLVRRTARDVSGWTGPALLGLKAAVGLTALLALSTRNIRADNPIIFCYCVPFMWLILVGPD
DETTRATRIGRMALCFLAVFTYLYAFPVAGAQVLFASVPAAIAAIVLLRDAASEIARAVPAALRANGLYRLAPALGCVVL
IALFAVDIYDGHRKYAGGVSLGMPGAARIRVEPQESAAYRWIANNVRSCSALYSMPGQFSLNLWTALKSPTDLTAGNWAG
LLDNGQQQAVVRDLSRYPGLCIVYTPELVKEWGRGQDLSKSPLARYIREEFVTVAGSDGNFILKRKDLAAPAVAHASNSQ
ANDQ

Sequences:

>Translated_644_residues
MATLPSPSLPAPLRRIWYWVAGFALLAAAGACIYYWMFSRFSPWDDDGYLLIGIQSLLKGDRLYDDIYSQYGPFYYLFHW
IAYSLAGLPASHEAQRFIGTGLWLVSAGLWARTTYLLTRSLLWSAFGFFVGIKLLEFFPWSAGHPEEICMALLAAIAILA
CGITPGNASRNVIGLGLLVAALTLTKVNMGLYAGVAVALFLFRISPPTAWRRTAEWLFSAAALLLPAALMATMFHFDWAR
NYAFVATAAIATAIYAAHRVELAVLVTERAWRTAAVSLLASALAVALPFFFRGTTLQALLRMTVLQHAGTARNWFLVAPI
GAKVVLCMLVSAGMLAIAYGLVRRTARDVSGWTGPALLGLKAAVGLTALLALSTRNIRADNPIIFCYCVPFMWLILVGPD
DETTRATRIGRMALCFLAVFTYLYAFPVAGAQVLFASVPAAIAAIVLLRDAASEIARAVPAALRANGLYRLAPALGCVVL
IALFAVDIYDGHRKYAGGVSLGMPGAARIRVEPQESAAYRWIANNVRSCSALYSMPGQFSLNLWTALKSPTDLTAGNWAG
LLDNGQQQAVVRDLSRYPGLCIVYTPELVKEWGRGQDLSKSPLARYIREEFVTVAGSDGNFILKRKDLAAPAVAHASNSQ
ANDQ
>Mature_643_residues
ATLPSPSLPAPLRRIWYWVAGFALLAAAGACIYYWMFSRFSPWDDDGYLLIGIQSLLKGDRLYDDIYSQYGPFYYLFHWI
AYSLAGLPASHEAQRFIGTGLWLVSAGLWARTTYLLTRSLLWSAFGFFVGIKLLEFFPWSAGHPEEICMALLAAIAILAC
GITPGNASRNVIGLGLLVAALTLTKVNMGLYAGVAVALFLFRISPPTAWRRTAEWLFSAAALLLPAALMATMFHFDWARN
YAFVATAAIATAIYAAHRVELAVLVTERAWRTAAVSLLASALAVALPFFFRGTTLQALLRMTVLQHAGTARNWFLVAPIG
AKVVLCMLVSAGMLAIAYGLVRRTARDVSGWTGPALLGLKAAVGLTALLALSTRNIRADNPIIFCYCVPFMWLILVGPDD
ETTRATRIGRMALCFLAVFTYLYAFPVAGAQVLFASVPAAIAAIVLLRDAASEIARAVPAALRANGLYRLAPALGCVVLI
ALFAVDIYDGHRKYAGGVSLGMPGAARIRVEPQESAAYRWIANNVRSCSALYSMPGQFSLNLWTALKSPTDLTAGNWAGL
LDNGQQQAVVRDLSRYPGLCIVYTPELVKEWGRGQDLSKSPLARYIREEFVTVAGSDGNFILKRKDLAAPAVAHASNSQA
NDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69888; Mature: 69757

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLPSPSLPAPLRRIWYWVAGFALLAAAGACIYYWMFSRFSPWDDDGYLLIGIQSLLKG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCC
DRLYDDIYSQYGPFYYLFHWIAYSLAGLPASHEAQRFIGTGLWLVSAGLWARTTYLLTRS
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LLWSAFGFFVGIKLLEFFPWSAGHPEEICMALLAAIAILACGITPGNASRNVIGLGLLVA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ALTLTKVNMGLYAGVAVALFLFRISPPTAWRRTAEWLFSAAALLLPAALMATMFHFDWAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NYAFVATAAIATAIYAAHRVELAVLVTERAWRTAAVSLLASALAVALPFFFRGTTLQALL
CHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RMTVLQHAGTARNWFLVAPIGAKVVLCMLVSAGMLAIAYGLVRRTARDVSGWTGPALLGL
HHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
KAAVGLTALLALSTRNIRADNPIIFCYCVPFMWLILVGPDDETTRATRIGRMALCFLAVF
HHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHH
TYLYAFPVAGAQVLFASVPAAIAAIVLLRDAASEIARAVPAALRANGLYRLAPALGCVVL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IALFAVDIYDGHRKYAGGVSLGMPGAARIRVEPQESAAYRWIANNVRSCSALYSMPGQFS
HHHHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEE
LNLWTALKSPTDLTAGNWAGLLDNGQQQAVVRDLSRYPGLCIVYTPELVKEWGRGQDLSK
EHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCEEEEECHHHHHHCCCCCCCCC
SPLARYIREEFVTVAGSDGNFILKRKDLAAPAVAHASNSQANDQ
CHHHHHHHHHHEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
ATLPSPSLPAPLRRIWYWVAGFALLAAAGACIYYWMFSRFSPWDDDGYLLIGIQSLLKG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCC
DRLYDDIYSQYGPFYYLFHWIAYSLAGLPASHEAQRFIGTGLWLVSAGLWARTTYLLTRS
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LLWSAFGFFVGIKLLEFFPWSAGHPEEICMALLAAIAILACGITPGNASRNVIGLGLLVA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ALTLTKVNMGLYAGVAVALFLFRISPPTAWRRTAEWLFSAAALLLPAALMATMFHFDWAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NYAFVATAAIATAIYAAHRVELAVLVTERAWRTAAVSLLASALAVALPFFFRGTTLQALL
CHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RMTVLQHAGTARNWFLVAPIGAKVVLCMLVSAGMLAIAYGLVRRTARDVSGWTGPALLGL
HHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
KAAVGLTALLALSTRNIRADNPIIFCYCVPFMWLILVGPDDETTRATRIGRMALCFLAVF
HHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHH
TYLYAFPVAGAQVLFASVPAAIAAIVLLRDAASEIARAVPAALRANGLYRLAPALGCVVL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IALFAVDIYDGHRKYAGGVSLGMPGAARIRVEPQESAAYRWIANNVRSCSALYSMPGQFS
HHHHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEE
LNLWTALKSPTDLTAGNWAGLLDNGQQQAVVRDLSRYPGLCIVYTPELVKEWGRGQDLSK
EHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCEEEEECHHHHHHCCCCCCCCC
SPLARYIREEFVTVAGSDGNFILKRKDLAAPAVAHASNSQANDQ
CHHHHHHHHHHEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA