| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621268
Identifier: 116621268
GI number: 116621268
Start: 2749753
End: 2751135
Strand: Direct
Name: 116621268
Synonym: Acid_2149
Alternate gene names: NA
Gene position: 2749753-2751135 (Clockwise)
Preceding gene: 116621267
Following gene: 116621269
Centisome position: 27.59
GC content: 61.39
Gene sequence:
>1383_bases ATGAAACCGCTCCTATTATTGGCCTTTGCTATGTCGCTCGCCTTCGGCCAGGCCAAGCTTCCTCCGTACACGCGCGAGAC GCTGCCCAACGGCGCGGGCATCGCGTTGATGCCGCGCAAGGGCGTTCCGCTGGTGCATTTTCGAGTGCTGGTCCGGGGCG GCGTGGAATCCGACCCCGCGCAAATGGCCGGCCTTACGAGCGTCACCGCGAGCTTGCTGCGGCGCGGCACGGCCAAGCGT ACTGCCGAGCAGTTCGCCGAAGAGCTGGATTTTCTGGGGGGTACCTTTCTAGCGGGCGCGCTCGACCAACTCGGTTCCAC GACCACGATTTCCGCGGAGTTCCTACAAAAAGATTTTGACCGCGGGCTCGATCTTCTCGCCGACGCGATCTTGAATCCGG CCTTCACCGGCAGCGAAGTGCGCAAGGAACTCTCGCGCAGGGTGGATGCCGCCAAGGCGGCCAAGGACAGTCCGCAAGCC GCCATGACCTTGTATTTCCGCCCCGCATTTTTCGGACGGCAGCATCCTTACGGAAATCCTCCGGATGAGATGACGTTCGC CCGCATCCAGCGCCAGGACATCGTCGATTATCACAAGAAAATGTATTGCGGCAAGAACATGCTGGTGGTCGTCACCGGCG ATTTCGATCCGGCCGCGGCTAAGGCGAAGCTCGCTGCCACATTCGGTGCGGCCCCCGCGGGTGCCGTTTTCGAGTGGATC GCGGCGCCCGCGCCCGCCGCGCAGGGCCGCCTCCTTTTGATCGATAAGCCGGATGCCACGCAGACCTATTTCCAGATCGC GCAGCAGGGTATCGACAAAAAGAGCCGCGACCGCACCACGCTCGAGATCGTCAACACGCTGTTTGGCGGCCGCTTCACCT CTCTGCTCAACGATGCCCTCCGCGTGAATTCCGGTCTTACCTACGGTGCGTCGGCGCAGCTTCAGGAAGATCGCTTGCCG GGCGCGATCGTCATCAACACATACACCAAGACCGACACCACCACGCAGGCCATCGACATGGCGCTCGACGTGTTGAAGCG GTTCAGCGAGAAGGGCATCACCGCGGACCAGCTGGCATCGGCCAAGGCTTACGTGAAGGGCCTCTATCCCACCCGGCGCC TGGAGACTATCGATCAACTGGCCGCCGAGATCGGCGAAATCGAAATGTACGGCCTGGGCCGCGATTCAGTGGATGGATAC TTCAGCCGCATCGATGCCGTTACGCTCGAACAAGCCAACGGCGTGATCGCGAAATATTACCGTCCCGATAACCTGACGTT CGTCATTCTCGGCGCGGCCGGCAAGATCCGCGACTCCGTGAAAAAGTACAATCCGCAAATATCGGAGCTATCCATCAAAG ACCCCGGCTGGGGCGCCTACTAG
Upstream 100 bases:
>100_bases GACGGCGGGCGACGTCCAGCGCGTTGCCAGGAAATACTTCCTCGAGAAGAATCGCACGGTTGCTACGTTGATTCCCGAAT CCAAGGAGGGCAAATAGGCA
Downstream 100 bases:
>100_bases CTTTCGAACGCAACGAGCCCCCGCAATGTACTACTGTGCATTTGCCTGTTGGCAGCCCGCAAAGGGTTCGCCCCCAACGA GCCGCGACCGTGAGGGAGCG
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MKPLLLLAFAMSLAFGQAKLPPYTRETLPNGAGIALMPRKGVPLVHFRVLVRGGVESDPAQMAGLTSVTASLLRRGTAKR TAEQFAEELDFLGGTFLAGALDQLGSTTTISAEFLQKDFDRGLDLLADAILNPAFTGSEVRKELSRRVDAAKAAKDSPQA AMTLYFRPAFFGRQHPYGNPPDEMTFARIQRQDIVDYHKKMYCGKNMLVVVTGDFDPAAAKAKLAATFGAAPAGAVFEWI AAPAPAAQGRLLLIDKPDATQTYFQIAQQGIDKKSRDRTTLEIVNTLFGGRFTSLLNDALRVNSGLTYGASAQLQEDRLP GAIVINTYTKTDTTTQAIDMALDVLKRFSEKGITADQLASAKAYVKGLYPTRRLETIDQLAAEIGEIEMYGLGRDSVDGY FSRIDAVTLEQANGVIAKYYRPDNLTFVILGAAGKIRDSVKKYNPQISELSIKDPGWGAY
Sequences:
>Translated_460_residues MKPLLLLAFAMSLAFGQAKLPPYTRETLPNGAGIALMPRKGVPLVHFRVLVRGGVESDPAQMAGLTSVTASLLRRGTAKR TAEQFAEELDFLGGTFLAGALDQLGSTTTISAEFLQKDFDRGLDLLADAILNPAFTGSEVRKELSRRVDAAKAAKDSPQA AMTLYFRPAFFGRQHPYGNPPDEMTFARIQRQDIVDYHKKMYCGKNMLVVVTGDFDPAAAKAKLAATFGAAPAGAVFEWI AAPAPAAQGRLLLIDKPDATQTYFQIAQQGIDKKSRDRTTLEIVNTLFGGRFTSLLNDALRVNSGLTYGASAQLQEDRLP GAIVINTYTKTDTTTQAIDMALDVLKRFSEKGITADQLASAKAYVKGLYPTRRLETIDQLAAEIGEIEMYGLGRDSVDGY FSRIDAVTLEQANGVIAKYYRPDNLTFVILGAAGKIRDSVKKYNPQISELSIKDPGWGAY >Mature_460_residues MKPLLLLAFAMSLAFGQAKLPPYTRETLPNGAGIALMPRKGVPLVHFRVLVRGGVESDPAQMAGLTSVTASLLRRGTAKR TAEQFAEELDFLGGTFLAGALDQLGSTTTISAEFLQKDFDRGLDLLADAILNPAFTGSEVRKELSRRVDAAKAAKDSPQA AMTLYFRPAFFGRQHPYGNPPDEMTFARIQRQDIVDYHKKMYCGKNMLVVVTGDFDPAAAKAKLAATFGAAPAGAVFEWI AAPAPAAQGRLLLIDKPDATQTYFQIAQQGIDKKSRDRTTLEIVNTLFGGRFTSLLNDALRVNSGLTYGASAQLQEDRLP GAIVINTYTKTDTTTQAIDMALDVLKRFSEKGITADQLASAKAYVKGLYPTRRLETIDQLAAEIGEIEMYGLGRDSVDGY FSRIDAVTLEQANGVIAKYYRPDNLTFVILGAAGKIRDSVKKYNPQISELSIKDPGWGAY
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 49982; Mature: 49982
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLLLLAFAMSLAFGQAKLPPYTRETLPNGAGIALMPRKGVPLVHFRVLVRGGVESDPA CCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCHH QMAGLTSVTASLLRRGTAKRTAEQFAEELDFLGGTFLAGALDQLGSTTTISAEFLQKDFD HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEHHHHHHHHHH RGLDLLADAILNPAFTGSEVRKELSRRVDAAKAAKDSPQAAMTLYFRPAFFGRQHPYGNP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCCCCC PDEMTFARIQRQDIVDYHKKMYCGKNMLVVVTGDFDPAAAKAKLAATFGAAPAGAVFEWI CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHH AAPAPAAQGRLLLIDKPDATQTYFQIAQQGIDKKSRDRTTLEIVNTLFGGRFTSLLNDAL HCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHH RVNSGLTYGASAQLQEDRLPGAIVINTYTKTDTTTQAIDMALDVLKRFSEKGITADQLAS HHCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH AKAYVKGLYPTRRLETIDQLAAEIGEIEMYGLGRDSVDGYFSRIDAVTLEQANGVIAKYY HHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHEEHHCCCEEEEEE RPDNLTFVILGAAGKIRDSVKKYNPQISELSIKDPGWGAY CCCCCEEEEEECCHHHHHHHHHHCCCHHEEEECCCCCCCC >Mature Secondary Structure MKPLLLLAFAMSLAFGQAKLPPYTRETLPNGAGIALMPRKGVPLVHFRVLVRGGVESDPA CCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCHH QMAGLTSVTASLLRRGTAKRTAEQFAEELDFLGGTFLAGALDQLGSTTTISAEFLQKDFD HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEHHHHHHHHHH RGLDLLADAILNPAFTGSEVRKELSRRVDAAKAAKDSPQAAMTLYFRPAFFGRQHPYGNP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCCCCC PDEMTFARIQRQDIVDYHKKMYCGKNMLVVVTGDFDPAAAKAKLAATFGAAPAGAVFEWI CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHH AAPAPAAQGRLLLIDKPDATQTYFQIAQQGIDKKSRDRTTLEIVNTLFGGRFTSLLNDAL HCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHH RVNSGLTYGASAQLQEDRLPGAIVINTYTKTDTTTQAIDMALDVLKRFSEKGITADQLAS HHCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH AKAYVKGLYPTRRLETIDQLAAEIGEIEMYGLGRDSVDGYFSRIDAVTLEQANGVIAKYY HHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHEEHHCCCEEEEEE RPDNLTFVILGAAGKIRDSVKKYNPQISELSIKDPGWGAY CCCCCEEEEEECCHHHHHHHHHHCCCHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]