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The map label for this gene is 116621227

Identifier: 116621227

GI number: 116621227

Start: 2693898

End: 2694995

Strand: Reverse

Name: 116621227

Synonym: Acid_2108

Alternate gene names: NA

Gene position: 2694995-2693898 (Counterclockwise)

Preceding gene: 116621228

Following gene: 116621226

Centisome position: 27.04

GC content: 62.57

Gene sequence:

>1098_bases
GTGTTCAGAGTATCGTTGACAGCAGCCCCCTCCCTTTTAGAAAATCGGCACAGAGCCAAGGACATGATCTCCGCTGCTAT
CCGGTTATTAAGTCTGGTGCTGCTTGCGGTACAAATCGGGGCGACAGCTCAGGATGCCGTGGCCGAAGCAGCGCGCGGTG
CGGCCTTAGCTCGTGAGGGGAAGTACGACCTCGCCATCGAACATTACAAGGCGGCCTTGCGTCTGAATACCCATTTGCCG
GGACTGCAGCTCAACCTGGGGCTCGCCTACTTCAAGTCCAACCATCTCCGCGAGGCGGCCGCGGCCCTCGAAGAAGCGGT
GCGGGCCGATCATAGCGGTTTCCAGGCCCGCGCTCTTCTGGGCATGAGCTACTACGGCTCCGGCCGGTACCGGGACGCTG
CGGCGCAGTTGAAACTCGCTTCCGAGGCACAGCCCGACAACCAGGAACTCCGCTTCACCCTGGCGCAGAGCTACTTATGG
TCGGAACAGTATTCCGAAGCCTTACGCGAATTCCAGTTCCTGCTTTCGAAAGACCCAGATTCCGCGCCGGTTCACATCCT
TCTGGGCCAGGCGTTCGATGCATCCCACCGGACGGAGGCCGCGATTGCTGAGTTCGAGGCCGCGGTAAAAGCATCGACCG
TGCCGCCTAACGCTCACTTTGGGCTGGGTTATCTCTACTGGAAACAGCGGCGGTACGAGGCGGCCGGCCGGGAGTTCGAA
ATGGAACTGGCCAGTCAGCCACAGCACTCGCAGTCACTTACTTATCTCGGTGACGCGGAAATGCACACCGACAAGGATGG
GCCCGCCGAAACGCATCTGCGACGCGCGCTGGCACTGGATGCAGGCATCCGGCTCGCCCACCTGGATCTCGGCATCCTTC
TCGCTGCAAAGAACGGTTCCGACGAAGCGGCTCGTCATTTCCGCGAGGCGATCCGGCTCGACCCGTCCAGGCCCGATGCG
CACTACCGCCTGGGCCGTCTGTGGACTTCCCTCGGGCGCGAGCACGAGGCGCAGGACGAGTTCGACAAGGTGCAGAAGTT
GGCCGCGGAGGAGCCGCCGCCACCGCTCCTCAGTCTTCCCGGGCGGCAGCTCCCGTGA

Upstream 100 bases:

>100_bases
TCAACCCTCGCACGCTACAGCTCGGGGCGAAGTTTCTGTTTTGATCGAACAGAACCCTGCGCCCGCTCGCCTACCGCTAG
GCAGGTGAGCGGGCGTTTTT

Downstream 100 bases:

>100_bases
CACTTTCTCTTAAATGTGTCGGCTGCGCGTGTGCGATAGCCATGGCAGTCGCGTGTGCCATCGTCTCCGGGCAGAATGCG
CCATCGCCGATTCACTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MFRVSLTAAPSLLENRHRAKDMISAAIRLLSLVLLAVQIGATAQDAVAEAARGAALAREGKYDLAIEHYKAALRLNTHLP
GLQLNLGLAYFKSNHLREAAAALEEAVRADHSGFQARALLGMSYYGSGRYRDAAAQLKLASEAQPDNQELRFTLAQSYLW
SEQYSEALREFQFLLSKDPDSAPVHILLGQAFDASHRTEAAIAEFEAAVKASTVPPNAHFGLGYLYWKQRRYEAAGREFE
MELASQPQHSQSLTYLGDAEMHTDKDGPAETHLRRALALDAGIRLAHLDLGILLAAKNGSDEAARHFREAIRLDPSRPDA
HYRLGRLWTSLGREHEAQDEFDKVQKLAAEEPPPPLLSLPGRQLP

Sequences:

>Translated_365_residues
MFRVSLTAAPSLLENRHRAKDMISAAIRLLSLVLLAVQIGATAQDAVAEAARGAALAREGKYDLAIEHYKAALRLNTHLP
GLQLNLGLAYFKSNHLREAAAALEEAVRADHSGFQARALLGMSYYGSGRYRDAAAQLKLASEAQPDNQELRFTLAQSYLW
SEQYSEALREFQFLLSKDPDSAPVHILLGQAFDASHRTEAAIAEFEAAVKASTVPPNAHFGLGYLYWKQRRYEAAGREFE
MELASQPQHSQSLTYLGDAEMHTDKDGPAETHLRRALALDAGIRLAHLDLGILLAAKNGSDEAARHFREAIRLDPSRPDA
HYRLGRLWTSLGREHEAQDEFDKVQKLAAEEPPPPLLSLPGRQLP
>Mature_365_residues
MFRVSLTAAPSLLENRHRAKDMISAAIRLLSLVLLAVQIGATAQDAVAEAARGAALAREGKYDLAIEHYKAALRLNTHLP
GLQLNLGLAYFKSNHLREAAAALEEAVRADHSGFQARALLGMSYYGSGRYRDAAAQLKLASEAQPDNQELRFTLAQSYLW
SEQYSEALREFQFLLSKDPDSAPVHILLGQAFDASHRTEAAIAEFEAAVKASTVPPNAHFGLGYLYWKQRRYEAAGREFE
MELASQPQHSQSLTYLGDAEMHTDKDGPAETHLRRALALDAGIRLAHLDLGILLAAKNGSDEAARHFREAIRLDPSRPDA
HYRLGRLWTSLGREHEAQDEFDKVQKLAAEEPPPPLLSLPGRQLP

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI167466177, Length=308, Percent_Identity=25.3246753246753, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI167466175, Length=308, Percent_Identity=25.3246753246753, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40330; Mature: 40330

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRVSLTAAPSLLENRHRAKDMISAAIRLLSLVLLAVQIGATAQDAVAEAARGAALAREG
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
KYDLAIEHYKAALRLNTHLPGLQLNLGLAYFKSNHLREAAAALEEAVRADHSGFQARALL
CCCHHHHHHHHHHEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GMSYYGSGRYRDAAAQLKLASEAQPDNQELRFTLAQSYLWSEQYSEALREFQFLLSKDPD
CCHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SAPVHILLGQAFDASHRTEAAIAEFEAAVKASTVPPNAHFGLGYLYWKQRRYEAAGREFE
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
MELASQPQHSQSLTYLGDAEMHTDKDGPAETHLRRALALDAGIRLAHLDLGILLAAKNGS
HHHHCCCCCCCCCEEECCCHHCCCCCCCHHHHHHHHHHHHCCCEEEEECEEEEEEECCCC
DEAARHFREAIRLDPSRPDAHYRLGRLWTSLGREHEAQDEFDKVQKLAAEEPPPPLLSLP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
GRQLP
CCCCC
>Mature Secondary Structure
MFRVSLTAAPSLLENRHRAKDMISAAIRLLSLVLLAVQIGATAQDAVAEAARGAALAREG
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
KYDLAIEHYKAALRLNTHLPGLQLNLGLAYFKSNHLREAAAALEEAVRADHSGFQARALL
CCCHHHHHHHHHHEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GMSYYGSGRYRDAAAQLKLASEAQPDNQELRFTLAQSYLWSEQYSEALREFQFLLSKDPD
CCHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SAPVHILLGQAFDASHRTEAAIAEFEAAVKASTVPPNAHFGLGYLYWKQRRYEAAGREFE
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
MELASQPQHSQSLTYLGDAEMHTDKDGPAETHLRRALALDAGIRLAHLDLGILLAAKNGS
HHHHCCCCCCCCCEEECCCHHCCCCCCCHHHHHHHHHHHHCCCEEEEECEEEEEEECCCC
DEAARHFREAIRLDPSRPDAHYRLGRLWTSLGREHEAQDEFDKVQKLAAEEPPPPLLSLP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
GRQLP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA