| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621226
Identifier: 116621226
GI number: 116621226
Start: 2692228
End: 2693856
Strand: Reverse
Name: 116621226
Synonym: Acid_2107
Alternate gene names: NA
Gene position: 2693856-2692228 (Counterclockwise)
Preceding gene: 116621227
Following gene: 116621223
Centisome position: 27.03
GC content: 59.91
Gene sequence:
>1629_bases ATGGCAGTCGCGTGTGCCATCGTCTCCGGGCAGAATGCGCCATCGCCGATTCACTTCACTTACCGGTCCATCGGATTCCG CCTGGATAGCTGCGAGACTCCTCGCCGCCATGCACCCGAGACTATGGCTGGAGGAGTGGCGGTGTTCGATTACAACAACG ACGGATACCTGGACATTCTCTTCACCAATGGAGCCGACATACTATCGTTGAAGAAAACCTCCCCGAAGTACTTCAACCGC CTTTTCGAGAACGACGGCAAGGGCAACTTTTCGGATGTCACCACCAAAGCCGGTCTGGCGGGAAGGGGTTTCGACAATGG GGTTGCCATCGGCGATTACGACAACGACGGCCGCGAAGATATCTTCGTTGGCGGCGTGCATGGAAATCGGCTGTACCACA ACGATGGCGGCACCTTTACTGATGTCACGGCCAAGGCCGGACTCGCCGCGTCAGACGCGCGCTACGGCCCGCTGTGGTCG GTCGGGGGTGCATGGGTGGACGTCAATAACGACGGCCGGCTCGACCTTCTGGTGGTGAACTACCTGGCATGGGACCCGAA CTCGGAGCCGTCCTGCGAAGTGGCGCCGGGCAAACTGGATTATTGCCACCCGAAACTCTATAAGCCGACCCCTAACCAGT TATTTCTAAACAACGGCGATGGGACCTTCCGCGACATTTCGGAAGAATCGGGAATCCGCGCCCATCCTGGAAAGGGGATG GGAATCGGATTGGCCGACTACGATCAGGATGGCCTGATGGACTTCTTCATTGCCAACGACAAGATGAATAACTCCCTCTT TCACAACAAGGGCGGGGCCCATTTCGAAGAAATTGCGTTTCAAGCCGGCGTGGCGTTGACGGAAGATGGAAAGTTCATCT CGGGAATGGGTGTGGACGCCCAGGACATCGACAATGACGGACTGCCGGACATTGTTTTCGTAGCACTCGAAGGTGAGACG TTCCCGCTATTTCGCAACCTTGGCAAACGCGGCTTTGCCGAGGCCACTCGAAGCAGCGGCCTGGGCCGCCTCACTCTACC CATGGCGGGGTACTCCCCGACAATCGCCGACTTCGACAACGACGGATGGAAGGACATCTTTGTCACCCGTGGACACGTGC AGGCGCTCGGATCGGGATCGACGGTGCAGATCGATCAGCCGAATACGATTTTTCGCAACCTGGGCGGCGCGAAGTTTCAG GCGCTGACAGAGGAAGGCGGGCTGTCGGCGCGGCCGCCGGCGCGGCATCGCGGATCCGCAGTGGGAGACCTGAATGCCGA TGGCCGCCTGGACGTAGTAGTAACCGCTTTGAGCGCACCTGCGGAGTTGTGGCTGAATGACAGTCCCGGGGGCGCGCATT GGTTGGAGCTGAAACTGGAAGGTACCGCCAGCAACCGCGATGGTATCGGCGCCCGAATCAAGGTGGCGGCAGGTGACCGC GTGCAGTATAACCACGTTTCGTTCGCCGCCGGATACGCGTCTTCGAGCGCCGCTCCCACGCACTTCGGACTCGGCCCGGC GGCATTCGCGAGCCTGATCGAGATTCGGTGGCCTTCGGGCGTCGTGCAGGAGCTCAAGGATGTCGCGGCTGATCGGGTAA TCCGGGTGAAGGAGCCGTCCCGGAACTGA
Upstream 100 bases:
>100_bases TGGCCGCGGAGGAGCCGCCGCCACCGCTCCTCAGTCTTCCCGGGCGGCAGCTCCCGTGACACTTTCTCTTAAATGTGTCG GCTGCGCGTGTGCGATAGCC
Downstream 100 bases:
>100_bases GAGCTTCATCGCCTCGGTCTCAGGGAGATAGCTACGCAATGACGCCGAAGATCGAATGGATGAGCGGAGCACGGCGTCTT ATGCTTTAACACAGGCCCGG
Product: ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; FG-GAP Repeat-Containing Protein; ASPIC/UnbV; FG-GAP Repeat Protein; TPR Repeat-Containing Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Aspic/Unbv; Rhs Family Protein; Aspic/Unbv Domain Protein; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein; Integrin-Like Protein; Protein Containing FG-GAP Repeats; Secreted Protein Containing FG-GAP Repeats; Fg-Gap; Fg-Gap Repeat Protein; ASPIC And UnbV Domain Protein; FG-GAP Repeat Domain-Containing Protein; RTX Family Protein Exoprotein; Protein Tyrosine Kinase Family; FG-GAP Repeat Protein/ASPIC/UnbV Domain Protein; Acid Secreted Protein ASPIC
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MAVACAIVSGQNAPSPIHFTYRSIGFRLDSCETPRRHAPETMAGGVAVFDYNNDGYLDILFTNGADILSLKKTSPKYFNR LFENDGKGNFSDVTTKAGLAGRGFDNGVAIGDYDNDGREDIFVGGVHGNRLYHNDGGTFTDVTAKAGLAASDARYGPLWS VGGAWVDVNNDGRLDLLVVNYLAWDPNSEPSCEVAPGKLDYCHPKLYKPTPNQLFLNNGDGTFRDISEESGIRAHPGKGM GIGLADYDQDGLMDFFIANDKMNNSLFHNKGGAHFEEIAFQAGVALTEDGKFISGMGVDAQDIDNDGLPDIVFVALEGET FPLFRNLGKRGFAEATRSSGLGRLTLPMAGYSPTIADFDNDGWKDIFVTRGHVQALGSGSTVQIDQPNTIFRNLGGAKFQ ALTEEGGLSARPPARHRGSAVGDLNADGRLDVVVTALSAPAELWLNDSPGGAHWLELKLEGTASNRDGIGARIKVAAGDR VQYNHVSFAAGYASSSAAPTHFGLGPAAFASLIEIRWPSGVVQELKDVAADRVIRVKEPSRN
Sequences:
>Translated_542_residues MAVACAIVSGQNAPSPIHFTYRSIGFRLDSCETPRRHAPETMAGGVAVFDYNNDGYLDILFTNGADILSLKKTSPKYFNR LFENDGKGNFSDVTTKAGLAGRGFDNGVAIGDYDNDGREDIFVGGVHGNRLYHNDGGTFTDVTAKAGLAASDARYGPLWS VGGAWVDVNNDGRLDLLVVNYLAWDPNSEPSCEVAPGKLDYCHPKLYKPTPNQLFLNNGDGTFRDISEESGIRAHPGKGM GIGLADYDQDGLMDFFIANDKMNNSLFHNKGGAHFEEIAFQAGVALTEDGKFISGMGVDAQDIDNDGLPDIVFVALEGET FPLFRNLGKRGFAEATRSSGLGRLTLPMAGYSPTIADFDNDGWKDIFVTRGHVQALGSGSTVQIDQPNTIFRNLGGAKFQ ALTEEGGLSARPPARHRGSAVGDLNADGRLDVVVTALSAPAELWLNDSPGGAHWLELKLEGTASNRDGIGARIKVAAGDR VQYNHVSFAAGYASSSAAPTHFGLGPAAFASLIEIRWPSGVVQELKDVAADRVIRVKEPSRN >Mature_541_residues AVACAIVSGQNAPSPIHFTYRSIGFRLDSCETPRRHAPETMAGGVAVFDYNNDGYLDILFTNGADILSLKKTSPKYFNRL FENDGKGNFSDVTTKAGLAGRGFDNGVAIGDYDNDGREDIFVGGVHGNRLYHNDGGTFTDVTAKAGLAASDARYGPLWSV GGAWVDVNNDGRLDLLVVNYLAWDPNSEPSCEVAPGKLDYCHPKLYKPTPNQLFLNNGDGTFRDISEESGIRAHPGKGMG IGLADYDQDGLMDFFIANDKMNNSLFHNKGGAHFEEIAFQAGVALTEDGKFISGMGVDAQDIDNDGLPDIVFVALEGETF PLFRNLGKRGFAEATRSSGLGRLTLPMAGYSPTIADFDNDGWKDIFVTRGHVQALGSGSTVQIDQPNTIFRNLGGAKFQA LTEEGGLSARPPARHRGSAVGDLNADGRLDVVVTALSAPAELWLNDSPGGAHWLELKLEGTASNRDGIGARIKVAAGDRV QYNHVSFAAGYASSSAAPTHFGLGPAAFASLIEIRWPSGVVQELKDVAADRVIRVKEPSRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47777317, Length=503, Percent_Identity=25.6461232604374, Blast_Score=93, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57954; Mature: 57823
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVACAIVSGQNAPSPIHFTYRSIGFRLDSCETPRRHAPETMAGGVAVFDYNNDGYLDIL CEEEEEEEECCCCCCCEEEEEHHHCEEECCCCCCHHCCCCHHHCCEEEEEECCCCEEEEE FTNGADILSLKKTSPKYFNRLFENDGKGNFSDVTTKAGLAGRGFDNGVAIGDYDNDGRED EECCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCE IFVGGVHGNRLYHNDGGTFTDVTAKAGLAASDARYGPLWSVGGAWVDVNNDGRLDLLVVN EEEEEECCCEEEECCCCEEEEEHHCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEEEEE YLAWDPNSEPSCEVAPGKLDYCHPKLYKPTPNQLFLNNGDGTFRDISEESGIRAHPGKGM EEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEECHHCCCCEECCCCCC GIGLADYDQDGLMDFFIANDKMNNSLFHNKGGAHFEEIAFQAGVALTEDGKFISGMGVDA EEEECCCCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHCCCEEECCCCEEEECCCCH QDIDNDGLPDIVFVALEGETFPLFRNLGKRGFAEATRSSGLGRLTLPMAGYSPTIADFDN HHCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCEECCCC DGWKDIFVTRGHVQALGSGSTVQIDQPNTIFRNLGGAKFQALTEEGGLSARPPARHRGSA CCCEEEEEECCEEEECCCCCEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCC VGDLNADGRLDVVVTALSAPAELWLNDSPGGAHWLELKLEGTASNRDGIGARIKVAAGDR CCCCCCCCEEEEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCE VQYNHVSFAAGYASSSAAPTHFGLGPAAFASLIEIRWPSGVVQELKDVAADRVIRVKEPS EEECEEEEEECCCCCCCCCCCCCCCHHHHHHHEEEECCCHHHHHHHHHHHHCEEEECCCC RN CC >Mature Secondary Structure AVACAIVSGQNAPSPIHFTYRSIGFRLDSCETPRRHAPETMAGGVAVFDYNNDGYLDIL EEEEEEEECCCCCCCEEEEEHHHCEEECCCCCCHHCCCCHHHCCEEEEEECCCCEEEEE FTNGADILSLKKTSPKYFNRLFENDGKGNFSDVTTKAGLAGRGFDNGVAIGDYDNDGRED EECCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCE IFVGGVHGNRLYHNDGGTFTDVTAKAGLAASDARYGPLWSVGGAWVDVNNDGRLDLLVVN EEEEEECCCEEEECCCCEEEEEHHCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEEEEE YLAWDPNSEPSCEVAPGKLDYCHPKLYKPTPNQLFLNNGDGTFRDISEESGIRAHPGKGM EEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEECHHCCCCEECCCCCC GIGLADYDQDGLMDFFIANDKMNNSLFHNKGGAHFEEIAFQAGVALTEDGKFISGMGVDA EEEECCCCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHCCCEEECCCCEEEECCCCH QDIDNDGLPDIVFVALEGETFPLFRNLGKRGFAEATRSSGLGRLTLPMAGYSPTIADFDN HHCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCEECCCC DGWKDIFVTRGHVQALGSGSTVQIDQPNTIFRNLGGAKFQALTEEGGLSARPPARHRGSA CCCEEEEEECCEEEECCCCCEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCC VGDLNADGRLDVVVTALSAPAELWLNDSPGGAHWLELKLEGTASNRDGIGARIKVAAGDR CCCCCCCCEEEEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCE VQYNHVSFAAGYASSSAAPTHFGLGPAAFASLIEIRWPSGVVQELKDVAADRVIRVKEPS EEECEEEEEECCCCCCCCCCCCCCCHHHHHHHEEEECCCHHHHHHHHHHHHCEEEECCCC RN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA