| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621185
Identifier: 116621185
GI number: 116621185
Start: 2623851
End: 2625443
Strand: Reverse
Name: 116621185
Synonym: Acid_2066
Alternate gene names: NA
Gene position: 2625443-2623851 (Counterclockwise)
Preceding gene: 116621186
Following gene: 116621184
Centisome position: 26.34
GC content: 63.03
Gene sequence:
>1593_bases TTGACCACAGTGACCTCTAAGCGATACGGAACCAGAGTGAGCGCCGCGCTGGTCCTGGTGGGACTGGCCATCCCATCCAC AACGGCCTTGCTCGCGCAATCCGTGAGCGCACCCAAGTCCGATGAGTTTTTGCTGCTCGGCAATGTGAACCGGGGGGCAG GCGAGCCGATCATTTTCGTCAATCCAACAGACCCGAAGAACATGATCGTCACCGCCATGGCCACTCTGAACCGTCTGCCT ACTGGGGAGACGCCCATTCCCCGAGGCAGCCCTGGGGCCACGGAACTCCGGATCAAAGAATTATCCACGCCGGACGGATC GCGCACCGATATCGCGGTCACCAGCGACGGCGGAAAAACCTGGACCTTCAGTGAAGATAACTTCCGCAAGGTCTTCAGTA AGAACCGTTGCAGCGATTCTTTCGCGGGAGCAGGTCCTGACGGCACCTTATATATGGGGTGTCTGGCGTACCTGAACCGC GGCAGCGCGGACTACGCCGAGGGATACGCGCCGAATGGGGAAGCGAGGGACTATCACGGCGGGTCCGCGATCGCCTGGTC CACGGACAAAGGCAAGACGTGGAGCGCGCCGGTTTGGGTCCACCCCGATCACTCGCCGAAGCTCTACGCGCCAACCGTCA AGCCCGTGTTCGAGCAGGCATCTCCCTGGGATCGCCCGATCTTCGTCGCGGACGCATCTACGGGTACGATCTACCTCAGC GGCAGCGGTCCCGCTTACACGGTAGACCCCGCCACGGTCCCGCGCCCGAAGATCGACCCGAGCCTGCCGGGCAAAGGGTA TACGGGCTACCCGCCGGCTTCCGTGACGCGAAATCGCACCTTTCTCCGAGCGTCTCACGATCGCGGCCGCACCTGGGGCG TGATCTACCCGATGGATTCCGATGCTTACCCGGGCGGACGCGGCGGTTTTAGCGCCGCGCATGGCCGGCTAGTGGTCGCC TACGGCGCTGCAAGTGTTCCGGCCAGTGAAAACGCGCAGTGTCCCTGTACGGTTCTGGGCACAAGCAAGGACGATGGCCA GAACTTCACATACAGAGTCGTGCCGCCTCTGCCGGCCGCTCCGACAAGTGGACAAGCCGGAGCGGGCCGCGGTGGGCGGG GCGGCGGCTTCGGTGGCGGCGTGATGCTCGCGGCCGATCCCTCGCAAGAAGGCCGCTATGCCCTGGCGCGGCAGTCCGGC AGTTCCATCCTCGTCTCCATCACCGAGGACGAAGGTAAGACTTGGCTGGCGCCGGTGGTTGCGGCGCAAGTGCCGGAAGG CGCGAATTTCAGCCAGCGCGCGATGAAGTATTCGGCTAAGGGCGATCTGGCGCTGATCTGGAAGGCCGCCTATGGCGACA GAAGCTTCGATGTCTGGTCTGCCGCCTCGCTCGACAACGGCCGTACATTCAAGACAGTGCGGGTCAGTCACGCGGTCTCT CCCACATATATTCCGGAGCGCGGCAACTTCCTTTTTGGTGACGACCTTTCCTCAGTAGAGATCGACGGCGAATACGTCCA CGTCGTGTGGGGGGACAACCGTTCCGGCTTCGAGGCAACGTGGTACGGGCGGGTTCCACTGAGTGCTTACTGA
Upstream 100 bases:
>100_bases GGCGAACGCAGCGATTCGATTCTAGATGAAGCGGTACCGGGATGGATGTGGGAGTGTCTCTTCACTCCCACACCATTTCG GGTGAATCCGGGAGAACCCA
Downstream 100 bases:
>100_bases TATTGATCTCACTGCCACGTCAACCGTAGGACTGGAGAAAATACTCGCATGCATTCCAGAAGAGACTTTGCAAAGATAGC GGTGGCAGCCATTCCACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MTTVTSKRYGTRVSAALVLVGLAIPSTTALLAQSVSAPKSDEFLLLGNVNRGAGEPIIFVNPTDPKNMIVTAMATLNRLP TGETPIPRGSPGATELRIKELSTPDGSRTDIAVTSDGGKTWTFSEDNFRKVFSKNRCSDSFAGAGPDGTLYMGCLAYLNR GSADYAEGYAPNGEARDYHGGSAIAWSTDKGKTWSAPVWVHPDHSPKLYAPTVKPVFEQASPWDRPIFVADASTGTIYLS GSGPAYTVDPATVPRPKIDPSLPGKGYTGYPPASVTRNRTFLRASHDRGRTWGVIYPMDSDAYPGGRGGFSAAHGRLVVA YGAASVPASENAQCPCTVLGTSKDDGQNFTYRVVPPLPAAPTSGQAGAGRGGRGGGFGGGVMLAADPSQEGRYALARQSG SSILVSITEDEGKTWLAPVVAAQVPEGANFSQRAMKYSAKGDLALIWKAAYGDRSFDVWSAASLDNGRTFKTVRVSHAVS PTYIPERGNFLFGDDLSSVEIDGEYVHVVWGDNRSGFEATWYGRVPLSAY
Sequences:
>Translated_530_residues MTTVTSKRYGTRVSAALVLVGLAIPSTTALLAQSVSAPKSDEFLLLGNVNRGAGEPIIFVNPTDPKNMIVTAMATLNRLP TGETPIPRGSPGATELRIKELSTPDGSRTDIAVTSDGGKTWTFSEDNFRKVFSKNRCSDSFAGAGPDGTLYMGCLAYLNR GSADYAEGYAPNGEARDYHGGSAIAWSTDKGKTWSAPVWVHPDHSPKLYAPTVKPVFEQASPWDRPIFVADASTGTIYLS GSGPAYTVDPATVPRPKIDPSLPGKGYTGYPPASVTRNRTFLRASHDRGRTWGVIYPMDSDAYPGGRGGFSAAHGRLVVA YGAASVPASENAQCPCTVLGTSKDDGQNFTYRVVPPLPAAPTSGQAGAGRGGRGGGFGGGVMLAADPSQEGRYALARQSG SSILVSITEDEGKTWLAPVVAAQVPEGANFSQRAMKYSAKGDLALIWKAAYGDRSFDVWSAASLDNGRTFKTVRVSHAVS PTYIPERGNFLFGDDLSSVEIDGEYVHVVWGDNRSGFEATWYGRVPLSAY >Mature_529_residues TTVTSKRYGTRVSAALVLVGLAIPSTTALLAQSVSAPKSDEFLLLGNVNRGAGEPIIFVNPTDPKNMIVTAMATLNRLPT GETPIPRGSPGATELRIKELSTPDGSRTDIAVTSDGGKTWTFSEDNFRKVFSKNRCSDSFAGAGPDGTLYMGCLAYLNRG SADYAEGYAPNGEARDYHGGSAIAWSTDKGKTWSAPVWVHPDHSPKLYAPTVKPVFEQASPWDRPIFVADASTGTIYLSG SGPAYTVDPATVPRPKIDPSLPGKGYTGYPPASVTRNRTFLRASHDRGRTWGVIYPMDSDAYPGGRGGFSAAHGRLVVAY GAASVPASENAQCPCTVLGTSKDDGQNFTYRVVPPLPAAPTSGQAGAGRGGRGGGFGGGVMLAADPSQEGRYALARQSGS SILVSITEDEGKTWLAPVVAAQVPEGANFSQRAMKYSAKGDLALIWKAAYGDRSFDVWSAASLDNGRTFKTVRVSHAVSP TYIPERGNFLFGDDLSSVEIDGEYVHVVWGDNRSGFEATWYGRVPLSAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56090; Mature: 55959
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVTSKRYGTRVSAALVLVGLAIPSTTALLAQSVSAPKSDEFLLLGNVNRGAGEPIIFV CCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEE NPTDPKNMIVTAMATLNRLPTGETPIPRGSPGATELRIKELSTPDGSRTDIAVTSDGGKT CCCCCCHHEEEEEHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCE WTFSEDNFRKVFSKNRCSDSFAGAGPDGTLYMGCLAYLNRGSADYAEGYAPNGEARDYHG EEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCC GSAIAWSTDKGKTWSAPVWVHPDHSPKLYAPTVKPVFEQASPWDRPIFVADASTGTIYLS CCEEEEECCCCCEECCCEEECCCCCCCEECCCHHHHHHCCCCCCCEEEEEECCCCEEEEE GSGPAYTVDPATVPRPKIDPSLPGKGYTGYPPASVTRNRTFLRASHDRGRTWGVIYPMDS CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCC DAYPGGRGGFSAAHGRLVVAYGAASVPASENAQCPCTVLGTSKDDGQNFTYRVVPPLPAA CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCC PTSGQAGAGRGGRGGGFGGGVMLAADPSQEGRYALARQSGSSILVSITEDEGKTWLAPVV CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCEEEEEHH AAQVPEGANFSQRAMKYSAKGDLALIWKAAYGDRSFDVWSAASLDNGRTFKTVRVSHAVS HHCCCCCCCHHHHHHEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCEEEEEEEECCCC PTYIPERGNFLFGDDLSSVEIDGEYVHVVWGDNRSGFEATWYGRVPLSAY CCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCCCEEEEEECCCCCCC >Mature Secondary Structure TTVTSKRYGTRVSAALVLVGLAIPSTTALLAQSVSAPKSDEFLLLGNVNRGAGEPIIFV CCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEE NPTDPKNMIVTAMATLNRLPTGETPIPRGSPGATELRIKELSTPDGSRTDIAVTSDGGKT CCCCCCHHEEEEEHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCE WTFSEDNFRKVFSKNRCSDSFAGAGPDGTLYMGCLAYLNRGSADYAEGYAPNGEARDYHG EEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCC GSAIAWSTDKGKTWSAPVWVHPDHSPKLYAPTVKPVFEQASPWDRPIFVADASTGTIYLS CCEEEEECCCCCEECCCEEECCCCCCCEECCCHHHHHHCCCCCCCEEEEEECCCCEEEEE GSGPAYTVDPATVPRPKIDPSLPGKGYTGYPPASVTRNRTFLRASHDRGRTWGVIYPMDS CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCC DAYPGGRGGFSAAHGRLVVAYGAASVPASENAQCPCTVLGTSKDDGQNFTYRVVPPLPAA CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCC PTSGQAGAGRGGRGGGFGGGVMLAADPSQEGRYALARQSGSSILVSITEDEGKTWLAPVV CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCEEEEEHH AAQVPEGANFSQRAMKYSAKGDLALIWKAAYGDRSFDVWSAASLDNGRTFKTVRVSHAVS HHCCCCCCCHHHHHHEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCEEEEEEEECCCC PTYIPERGNFLFGDDLSSVEIDGEYVHVVWGDNRSGFEATWYGRVPLSAY CCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA