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The map label for this gene is 116621184

Identifier: 116621184

GI number: 116621184

Start: 2622840

End: 2623802

Strand: Reverse

Name: 116621184

Synonym: Acid_2065

Alternate gene names: NA

Gene position: 2623802-2622840 (Counterclockwise)

Preceding gene: 116621185

Following gene: 116621183

Centisome position: 26.33

GC content: 59.92

Gene sequence:

>963_bases
ATGCATTCCAGAAGAGACTTTGCAAAGATAGCGGTGGCAGCCATTCCACTGGCGCGCAGCCTTTGGGGCGTGAACTCGAC
TATTCACGGTGTTCGCATGGGCGTGCAGTCCGCAAGCTTCACGTTCAGCGGCATCGGCATCGAGGGCATCATCAAGACCA
TGGTAGACCTGGGACTTGCGGAAATTGACGTGATGTCTGAGCATGTCGAGAACTTCCTGGGTGCGCCGGTGCCGCTCCCG
GGAGCCGGCCGGCCCGGACCGTGGGCGCGGCGCGGCGGTGCTCCTGGCGCGCCGGGCGGGGCTCCGCCTTCAGGACCCGG
AGGCAGGGCAGGCTTCGGACGCGGGGGCGATCCGGCGGTTCGCGAGGCGTTGCGCAAATGGCGCATGGATATCGACCTGG
ATAAGTTCCGCGGTGTAGGAAAGCGCTTTACCGACGCCGGACTTCGGTTCTACTCTTACAACCTCAGTTTCAACGATTCG
TTCACGGATGATGAGATCGATAAGGGATTCCTGATGACCAAGGCGCTTGGAACCAGGATCATCACGGCCTCGTCGCCAGC
CTCAATTTTCCCGCGCATCGCGCCATTTGCCGAAAAGCACGACGTGATCGTCGCGATGCACAATCACACGAATGGACCGG
CCGAATTCGAGCAGGCGATGGCGGCCTCGAAGAAGATCTGGGTCAACCTGGACGTCGGCCACTTCTTTGCATCCGGCTAC
GACCCAATCGCTTACTTGAAAGAACACCACGCCCGGATCACCAACATTCACGTGAAGGACCGCAAGAAGGACCGCGGGGC
GGAAATGCCGTTCGGTGAAGGCGACACTCCGCTCAAAGAAGTTCTCCAACTGGTCAAAAAGGAGAAGTACGATTTCCCCG
TTTGCATCGAGTACGTCGGACCCGATGGCCCGGCCGTCGAGTTGAAACGATGCTTCGACTACTGCAAGGCGGCACTCGCG
TAG

Upstream 100 bases:

>100_bases
TTCCGGCTTCGAGGCAACGTGGTACGGGCGGGTTCCACTGAGTGCTTACTGATATTGATCTCACTGCCACGTCAACCGTA
GGACTGGAGAAAATACTCGC

Downstream 100 bases:

>100_bases
GGAGCGCTCAGGAGAAGAGATGCATCAGGGTAAAACAGGTATTCTCATTTCGACTTTGTGGGCAGCCATGATTACCGGCA
CGGTAAACGCTCAGCCCCCC

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; 16S RRNA-Processing Protein; Xylose Isomerase Domain-Containing Protein TIM Barrel

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MHSRRDFAKIAVAAIPLARSLWGVNSTIHGVRMGVQSASFTFSGIGIEGIIKTMVDLGLAEIDVMSEHVENFLGAPVPLP
GAGRPGPWARRGGAPGAPGGAPPSGPGGRAGFGRGGDPAVREALRKWRMDIDLDKFRGVGKRFTDAGLRFYSYNLSFNDS
FTDDEIDKGFLMTKALGTRIITASSPASIFPRIAPFAEKHDVIVAMHNHTNGPAEFEQAMAASKKIWVNLDVGHFFASGY
DPIAYLKEHHARITNIHVKDRKKDRGAEMPFGEGDTPLKEVLQLVKKEKYDFPVCIEYVGPDGPAVELKRCFDYCKAALA

Sequences:

>Translated_320_residues
MHSRRDFAKIAVAAIPLARSLWGVNSTIHGVRMGVQSASFTFSGIGIEGIIKTMVDLGLAEIDVMSEHVENFLGAPVPLP
GAGRPGPWARRGGAPGAPGGAPPSGPGGRAGFGRGGDPAVREALRKWRMDIDLDKFRGVGKRFTDAGLRFYSYNLSFNDS
FTDDEIDKGFLMTKALGTRIITASSPASIFPRIAPFAEKHDVIVAMHNHTNGPAEFEQAMAASKKIWVNLDVGHFFASGY
DPIAYLKEHHARITNIHVKDRKKDRGAEMPFGEGDTPLKEVLQLVKKEKYDFPVCIEYVGPDGPAVELKRCFDYCKAALA
>Mature_320_residues
MHSRRDFAKIAVAAIPLARSLWGVNSTIHGVRMGVQSASFTFSGIGIEGIIKTMVDLGLAEIDVMSEHVENFLGAPVPLP
GAGRPGPWARRGGAPGAPGGAPPSGPGGRAGFGRGGDPAVREALRKWRMDIDLDKFRGVGKRFTDAGLRFYSYNLSFNDS
FTDDEIDKGFLMTKALGTRIITASSPASIFPRIAPFAEKHDVIVAMHNHTNGPAEFEQAMAASKKIWVNLDVGHFFASGY
DPIAYLKEHHARITNIHVKDRKKDRGAEMPFGEGDTPLKEVLQLVKKEKYDFPVCIEYVGPDGPAVELKRCFDYCKAALA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34766; Mature: 34766

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSRRDFAKIAVAAIPLARSLWGVNSTIHGVRMGVQSASFTFSGIGIEGIIKTMVDLGLA
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHH
EIDVMSEHVENFLGAPVPLPGAGRPGPWARRGGAPGAPGGAPPSGPGGRAGFGRGGDPAV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
REALRKWRMDIDLDKFRGVGKRFTDAGLRFYSYNLSFNDSFTDDEIDKGFLMTKALGTRI
HHHHHHHCCCCCHHHHHCCCHHHHHCCCEEEEEEEECCCCCCCCHHCCCHHHHHHHCCEE
ITASSPASIFPRIAPFAEKHDVIVAMHNHTNGPAEFEQAMAASKKIWVNLDVGHFFASGY
EECCCCHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEHHHHHHCCC
DPIAYLKEHHARITNIHVKDRKKDRGAEMPFGEGDTPLKEVLQLVKKEKYDFPVCIEYVG
CHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEC
PDGPAVELKRCFDYCKAALA
CCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHSRRDFAKIAVAAIPLARSLWGVNSTIHGVRMGVQSASFTFSGIGIEGIIKTMVDLGLA
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHH
EIDVMSEHVENFLGAPVPLPGAGRPGPWARRGGAPGAPGGAPPSGPGGRAGFGRGGDPAV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
REALRKWRMDIDLDKFRGVGKRFTDAGLRFYSYNLSFNDSFTDDEIDKGFLMTKALGTRI
HHHHHHHCCCCCHHHHHCCCHHHHHCCCEEEEEEEECCCCCCCCHHCCCHHHHHHHCCEE
ITASSPASIFPRIAPFAEKHDVIVAMHNHTNGPAEFEQAMAASKKIWVNLDVGHFFASGY
EECCCCHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEHHHHHHCCC
DPIAYLKEHHARITNIHVKDRKKDRGAEMPFGEGDTPLKEVLQLVKKEKYDFPVCIEYVG
CHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEC
PDGPAVELKRCFDYCKAALA
CCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA