| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621158
Identifier: 116621158
GI number: 116621158
Start: 2585642
End: 2586493
Strand: Reverse
Name: 116621158
Synonym: Acid_2039
Alternate gene names: NA
Gene position: 2586493-2585642 (Counterclockwise)
Preceding gene: 116621160
Following gene: 116621157
Centisome position: 25.95
GC content: 63.62
Gene sequence:
>852_bases ATGTCTCCTTTGAGCAAGCGGGCGCAGACCCGATTTGTTGTGCTTCCTCCGACTTCCGGCGTTGCGGCGGCCCGAGTTTT TCGCAATGTGGAACAGGATACGTTTAGCCACAGCCGGTTGCTAAACGAGATGCAGCGCTTCCGCGGCTCGATGTATCTCC GCGACGGCGCCATACAAAGATCAGACTTGACAGCCGATGGCCGCCATCACACCGAGGTGGATGATCGGAGTTGGCATGTT CTGTCGCTCGATCACCACAATCGCGTCTGCGCCTGTCTCCGTTTCGTCGATGAGACCCGCGCCGCCGGCTTCGACGATCT CTTGATCCGCCGCGCCGCCCTCGCTGACTCTCCCGAACTCGGTGACCGCTTCCGTGCCGCCGTTGAAGATCGCATGCGCG ACGCCCGCCGGATGGGAATGAATTTCGGCGAGGTCGGGGGCTGGGCTGTCGCCGAAGAGCACCGCCACACGCTCGAGCCG CTGCGGATCATTCTGGCCACCTACGCCCTGCTGGAGTTGCTCGGCGGGTCGCTCGGCGTTGCCACCGCCACTTACCGCCA CGAATCCGCACCCATGCTGCGCCGCATCGGCCTCGGCGGCATGCTCTCCGCCGGCGAAGAATTGCCCAGCTACTACGATC CGCACTACGGCTGTCACATGCAGGTGCTGCAGTTCGATTCCCGAAATCCCAATCCCAAGTACCGCGGCTGGGTCACGGAA TTGGAGAGCGATCTCACTTCCGCCCGCGTAGTCTGCCGCCAGGTTCCGGTGGTTCGGGAAAGCCCGGCGGTCGATAGTCT GCCGGCCCGCCTGTTGCGCGGGTTTGAACTCGCCCCTCCGCTTCCGGCTTAG
Upstream 100 bases:
>100_bases TTAGCTCAAGCTCGCGTCACTCGCTCTCACGCTCACGTTCACGCTGCAAAGGGCACATCCAGAAGGCGCAAATACGTCTT GGAAAAGAGCGCGAACGACC
Downstream 100 bases:
>100_bases AATGGTAGCAATGACCATCAGCGATCCGGCAGTGCGGGAATGGTGCTCGGTGGTCGGCCCCGAGCACGTACTGACCGCGC CGGAAAAGTTGCGCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSPLSKRAQTRFVVLPPTSGVAAARVFRNVEQDTFSHSRLLNEMQRFRGSMYLRDGAIQRSDLTADGRHHTEVDDRSWHV LSLDHHNRVCACLRFVDETRAAGFDDLLIRRAALADSPELGDRFRAAVEDRMRDARRMGMNFGEVGGWAVAEEHRHTLEP LRIILATYALLELLGGSLGVATATYRHESAPMLRRIGLGGMLSAGEELPSYYDPHYGCHMQVLQFDSRNPNPKYRGWVTE LESDLTSARVVCRQVPVVRESPAVDSLPARLLRGFELAPPLPA
Sequences:
>Translated_283_residues MSPLSKRAQTRFVVLPPTSGVAAARVFRNVEQDTFSHSRLLNEMQRFRGSMYLRDGAIQRSDLTADGRHHTEVDDRSWHV LSLDHHNRVCACLRFVDETRAAGFDDLLIRRAALADSPELGDRFRAAVEDRMRDARRMGMNFGEVGGWAVAEEHRHTLEP LRIILATYALLELLGGSLGVATATYRHESAPMLRRIGLGGMLSAGEELPSYYDPHYGCHMQVLQFDSRNPNPKYRGWVTE LESDLTSARVVCRQVPVVRESPAVDSLPARLLRGFELAPPLPA >Mature_282_residues SPLSKRAQTRFVVLPPTSGVAAARVFRNVEQDTFSHSRLLNEMQRFRGSMYLRDGAIQRSDLTADGRHHTEVDDRSWHVL SLDHHNRVCACLRFVDETRAAGFDDLLIRRAALADSPELGDRFRAAVEDRMRDARRMGMNFGEVGGWAVAEEHRHTLEPL RIILATYALLELLGGSLGVATATYRHESAPMLRRIGLGGMLSAGEELPSYYDPHYGCHMQVLQFDSRNPNPKYRGWVTEL ESDLTSARVVCRQVPVVRESPAVDSLPARLLRGFELAPPLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31772; Mature: 31640
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLSKRAQTRFVVLPPTSGVAAARVFRNVEQDTFSHSRLLNEMQRFRGSMYLRDGAIQR CCCHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC SDLTADGRHHTEVDDRSWHVLSLDHHNRVCACLRFVDETRAAGFDDLLIRRAALADSPEL CCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCH GDRFRAAVEDRMRDARRMGMNFGEVGGWAVAEEHRHTLEPLRIILATYALLELLGGSLGV HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ATATYRHESAPMLRRIGLGGMLSAGEELPSYYDPHYGCHMQVLQFDSRNPNPKYRGWVTE HHHHHCCCCCHHHHHHCCCCHHHCHHHCCHHCCCCCCCEEEEEEECCCCCCCCHHHHHHH LESDLTSARVVCRQVPVVRESPAVDSLPARLLRGFELAPPLPA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SPLSKRAQTRFVVLPPTSGVAAARVFRNVEQDTFSHSRLLNEMQRFRGSMYLRDGAIQR CCHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC SDLTADGRHHTEVDDRSWHVLSLDHHNRVCACLRFVDETRAAGFDDLLIRRAALADSPEL CCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCH GDRFRAAVEDRMRDARRMGMNFGEVGGWAVAEEHRHTLEPLRIILATYALLELLGGSLGV HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ATATYRHESAPMLRRIGLGGMLSAGEELPSYYDPHYGCHMQVLQFDSRNPNPKYRGWVTE HHHHHCCCCCHHHHHHCCCCHHHCHHHCCHHCCCCCCCEEEEEEECCCCCCCCHHHHHHH LESDLTSARVVCRQVPVVRESPAVDSLPARLLRGFELAPPLPA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA