| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621114
Identifier: 116621114
GI number: 116621114
Start: 2522688
End: 2523836
Strand: Direct
Name: 116621114
Synonym: Acid_1995
Alternate gene names: NA
Gene position: 2522688-2523836 (Clockwise)
Preceding gene: 116621111
Following gene: 116621115
Centisome position: 25.31
GC content: 61.97
Gene sequence:
>1149_bases ATGAATCAGGAAAACAAGAGTCAACTCACCCGGGCTTGGGTGGATTGGACCGCCCGCCAGATTCACGACCCAGTCTGGCG ATTGCGCTACCTGCAATCCGTGATCCCATCCGCGCGCCGATCGCGCCTGAAGTCGCGGAAAACAATCGGACTTCTGACTC TCTTGGCAATCGGGACCGTGGCGGCCCCCTTATCGCTGCGCGTGTCCGGCGCGGCCCGCACAGCACCGCCCCCGCCGCCC CTTGTGGTGCCCCCGCCTCGCGTGCAAGCGCCGGTACAGGTGGTGGAACCGCCGTTTCCTGACGTCTGGCCCGTCGAAAA TACCAGCGGCTACGACGTATATAGCAATGGCCTGCGCATCGAAAATCAGTATGCCGTCAGCCATCGTCCGCGCGCCTATC TGGCGTATCCCATGGCGGACCCGGAGGGCGCCCACGGTGAAATACGGGCCGAACCCGCCGGCATCGTGTATCACACCACC GAAAGCCTGCAGGCGCCCTTTGAATCAAGTCAGAACAACGTTTTGAAACAGGTAGGCGAGTCCCTGATCTCTTATGTGGG CCGGCGCCGTTGTTATCACTTTCTGATCGACCGCTTCGGTCGTGTCTTCCGTATCGTCAACGAGAGCGATGCGGCCGACC ATGCCGGCCACTCGGTATGGGCCGACGACCGCTACTTATATGTCAACCTGAACGATAGCTTCATCGGCGTTTCCTTCGAG GCGCAGACCGGTCTTGGCGGGGATGCCACCAGCGCCGGCGGCGCCCAGGTGCGCTCCGCGGCCATGCTCACCGAAATGCT GCGCAGCCGCTACAAGATTCCGGCAAGGAACTGCGTCACCCACGCACAGGTCTCCGTAAACCCTTCCAACATGCAAATCG GCTACCACATCGACTGGGCGTCCAGTTTTCCCTTCGAAAAGTTGGGGCTGCCGGATAATTACGCCTGGCCCTCTCCCGCC GTCTCCCTGTTCGGCTTCGGTTTCGATGCGACCTTCGCACAGCGTGCCGGCGAGCGTATGGGCGCCTCCGCACTGGAAGC CGAACTCAGCGTTCAGCGACAGGCCCGCGTCGCGCACCTGAGTATCGCCGCCTACCGCCAGTTTCTCCGCAAGCGCTTCT TGAAGTTTTCGTCTCACCGGCCCGGATAA
Upstream 100 bases:
>100_bases AGTGAGGGCGCTTCGCCCTTTCTCTCACCGGGGCTGCGATTAATTATTTGTGCGCCAGTACTAATGGGTTCTTGGCTTCC AGCCGATTGCTCATGTAGTC
Downstream 100 bases:
>100_bases AAGTGCCTGCTCCGTGGAGGATCTGTGCACGATAATGAAAGTAATGTCCACGCAACCCGTTTGCGGAAAGTGCGGCGGCA CCGGCTGGATTATCATCGAG
Product: N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MNQENKSQLTRAWVDWTARQIHDPVWRLRYLQSVIPSARRSRLKSRKTIGLLTLLAIGTVAAPLSLRVSGAARTAPPPPP LVVPPPRVQAPVQVVEPPFPDVWPVENTSGYDVYSNGLRIENQYAVSHRPRAYLAYPMADPEGAHGEIRAEPAGIVYHTT ESLQAPFESSQNNVLKQVGESLISYVGRRRCYHFLIDRFGRVFRIVNESDAADHAGHSVWADDRYLYVNLNDSFIGVSFE AQTGLGGDATSAGGAQVRSAAMLTEMLRSRYKIPARNCVTHAQVSVNPSNMQIGYHIDWASSFPFEKLGLPDNYAWPSPA VSLFGFGFDATFAQRAGERMGASALEAELSVQRQARVAHLSIAAYRQFLRKRFLKFSSHRPG
Sequences:
>Translated_382_residues MNQENKSQLTRAWVDWTARQIHDPVWRLRYLQSVIPSARRSRLKSRKTIGLLTLLAIGTVAAPLSLRVSGAARTAPPPPP LVVPPPRVQAPVQVVEPPFPDVWPVENTSGYDVYSNGLRIENQYAVSHRPRAYLAYPMADPEGAHGEIRAEPAGIVYHTT ESLQAPFESSQNNVLKQVGESLISYVGRRRCYHFLIDRFGRVFRIVNESDAADHAGHSVWADDRYLYVNLNDSFIGVSFE AQTGLGGDATSAGGAQVRSAAMLTEMLRSRYKIPARNCVTHAQVSVNPSNMQIGYHIDWASSFPFEKLGLPDNYAWPSPA VSLFGFGFDATFAQRAGERMGASALEAELSVQRQARVAHLSIAAYRQFLRKRFLKFSSHRPG >Mature_382_residues MNQENKSQLTRAWVDWTARQIHDPVWRLRYLQSVIPSARRSRLKSRKTIGLLTLLAIGTVAAPLSLRVSGAARTAPPPPP LVVPPPRVQAPVQVVEPPFPDVWPVENTSGYDVYSNGLRIENQYAVSHRPRAYLAYPMADPEGAHGEIRAEPAGIVYHTT ESLQAPFESSQNNVLKQVGESLISYVGRRRCYHFLIDRFGRVFRIVNESDAADHAGHSVWADDRYLYVNLNDSFIGVSFE AQTGLGGDATSAGGAQVRSAAMLTEMLRSRYKIPARNCVTHAQVSVNPSNMQIGYHIDWASSFPFEKLGLPDNYAWPSPA VSLFGFGFDATFAQRAGERMGASALEAELSVQRQARVAHLSIAAYRQFLRKRFLKFSSHRPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42444; Mature: 42444
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQENKSQLTRAWVDWTARQIHDPVWRLRYLQSVIPSARRSRLKSRKTIGLLTLLAIGTV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AAPLSLRVSGAARTAPPPPPLVVPPPRVQAPVQVVEPPFPDVWPVENTSGYDVYSNGLRI HCCCEEEECCCCCCCCCCCCEECCCCCCCCCHHEECCCCCCCCCCCCCCCCCEECCCEEE ENQYAVSHRPRAYLAYPMADPEGAHGEIRAEPAGIVYHTTESLQAPFESSQNNVLKQVGE ECEEECCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEHHHHHCCHHCHHHHHHHHHHH SLISYVGRRRCYHFLIDRFGRVFRIVNESDAADHAGHSVWADDRYLYVNLNDSFIGVSFE HHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCHHCCCCEECCCEEEEEEECCCEEEEEEE AQTGLGGDATSAGGAQVRSAAMLTEMLRSRYKIPARNCVTHAQVSVNPSNMQIGYHIDWA ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCEEEEEEEECC SSFPFEKLGLPDNYAWPSPAVSLFGFGFDATFAQRAGERMGASALEAELSVQRQARVAHL CCCCHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH SIAAYRQFLRKRFLKFSSHRPG HHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNQENKSQLTRAWVDWTARQIHDPVWRLRYLQSVIPSARRSRLKSRKTIGLLTLLAIGTV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AAPLSLRVSGAARTAPPPPPLVVPPPRVQAPVQVVEPPFPDVWPVENTSGYDVYSNGLRI HCCCEEEECCCCCCCCCCCCEECCCCCCCCCHHEECCCCCCCCCCCCCCCCCEECCCEEE ENQYAVSHRPRAYLAYPMADPEGAHGEIRAEPAGIVYHTTESLQAPFESSQNNVLKQVGE ECEEECCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEHHHHHCCHHCHHHHHHHHHHH SLISYVGRRRCYHFLIDRFGRVFRIVNESDAADHAGHSVWADDRYLYVNLNDSFIGVSFE HHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCHHCCCCEECCCEEEEEEECCCEEEEEEE AQTGLGGDATSAGGAQVRSAAMLTEMLRSRYKIPARNCVTHAQVSVNPSNMQIGYHIDWA ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCEEEEEEEECC SSFPFEKLGLPDNYAWPSPAVSLFGFGFDATFAQRAGERMGASALEAELSVQRQARVAHL CCCCHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH SIAAYRQFLRKRFLKFSSHRPG HHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA