| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621047
Identifier: 116621047
GI number: 116621047
Start: 2393946
End: 2394995
Strand: Direct
Name: 116621047
Synonym: Acid_1928
Alternate gene names: NA
Gene position: 2393946-2394995 (Clockwise)
Preceding gene: 116621042
Following gene: 116621050
Centisome position: 24.02
GC content: 65.33
Gene sequence:
>1050_bases TTGGAGCAGGCTGTCCAGTTTGCGCGGGAGCGGCGTTATGCCGAAGCCCGTCGCTTGTTGGAGAGTGCGGTTGAGCCGGC GGGAACCACACAGCGCATTGCGTTCCACCGGCTGAAAGCCGCGGTTGCGTCGGGATTGGGAGACACCGCGGCCGCCGTAA ATGAAATGCGGTCGGCTCTTGCGCTCGCACCGGGAGATGCAGGTTTGCAGACGGCCACGGCTGCGGCCGAATTGCAGGCG GGCCTGCTCGATGACGCGGTGGCGCACGCGCAGGGCGGAGCCGGCACGGCAGTGGGGCAGGCGCTGCTGGGCGATATCCA GGAAAAACGCGGCCAGTATCTGGAAGCCGCCAAAAGCTACCAGGCGGCGGTTGTGCTCGCACCCGACCGCGAACAGTATC GCATCGCGCTCGCGCTGGAGTTAGTACAGCACCACACTTTTGAGGCTGCCGTTGCGGTATTGGAGCAGGCCATCCCTCGG TTCCCGAAATCGGCGCGGCTTCGTGTGTTGCTCGGCGTTGCCCAGTATGCCGCGGGCCGGTATGAGGACGCCGAAGCCGC GCTGACCGACGCTCTAGAGCTAGGACCGGAACTGGAGCCGGTGTACGGCTACCTCGCACAGGCCGCACTGGAGGCGCCCT CCGCACCTCCCGAGCGCGCACTGAAAGCGATCTGCACCCGCGAGCCCATCGTATGCAGCGTGCTCAAGGCCCGCTCGGCC CGCGCGACGGGAGACGCCGGGTTGGAAGCCCAGGCAATCGCGGAACTGAAACGCGCGCCGAAAAATAACGCGATGGCACA CTGCGAACTCGGCAGGGTCTATCAGGCCGCCGCTCAGTGGACCGAAGCACGCGTCGAATTCGAAGCGTGCGTCCAACTCG ATCCGTCGGCGCAGAATCACTACCGCCTCGGATTGGTGTACAACCGTTTGGGCCTGGCCGAACTCGCGGTGAAGCAGATG GAACTCCGCAAGGCCGCCGAGGAGCGCGGGGCCGAAGATACCGCCCGCCGGCAAAGCGCCGTCCGGGCATTTCAATATCT CATCAAGTAA
Upstream 100 bases:
>100_bases CAGTCTGGGTCAATTTGCCCAAGTTATCATAGTTGGTACGATCCGCTCGACTCTCATTTTCGCGCTGGCGACGGCGATCG GAGCACTGGCCCAATCGCCG
Downstream 100 bases:
>100_bases TCAGCGCTGCGGATTCTTGGGCAGGCTGATCAGGTTTGCGAAAATGCGGTAGGCGCCGGCTACGCCTTCGGGCAACTGGC GGTAGAATGCGTAGGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MEQAVQFARERRYAEARRLLESAVEPAGTTQRIAFHRLKAAVASGLGDTAAAVNEMRSALALAPGDAGLQTATAAAELQA GLLDDAVAHAQGGAGTAVGQALLGDIQEKRGQYLEAAKSYQAAVVLAPDREQYRIALALELVQHHTFEAAVAVLEQAIPR FPKSARLRVLLGVAQYAAGRYEDAEAALTDALELGPELEPVYGYLAQAALEAPSAPPERALKAICTREPIVCSVLKARSA RATGDAGLEAQAIAELKRAPKNNAMAHCELGRVYQAAAQWTEARVEFEACVQLDPSAQNHYRLGLVYNRLGLAELAVKQM ELRKAAEERGAEDTARRQSAVRAFQYLIK
Sequences:
>Translated_349_residues MEQAVQFARERRYAEARRLLESAVEPAGTTQRIAFHRLKAAVASGLGDTAAAVNEMRSALALAPGDAGLQTATAAAELQA GLLDDAVAHAQGGAGTAVGQALLGDIQEKRGQYLEAAKSYQAAVVLAPDREQYRIALALELVQHHTFEAAVAVLEQAIPR FPKSARLRVLLGVAQYAAGRYEDAEAALTDALELGPELEPVYGYLAQAALEAPSAPPERALKAICTREPIVCSVLKARSA RATGDAGLEAQAIAELKRAPKNNAMAHCELGRVYQAAAQWTEARVEFEACVQLDPSAQNHYRLGLVYNRLGLAELAVKQM ELRKAAEERGAEDTARRQSAVRAFQYLIK >Mature_349_residues MEQAVQFARERRYAEARRLLESAVEPAGTTQRIAFHRLKAAVASGLGDTAAAVNEMRSALALAPGDAGLQTATAAAELQA GLLDDAVAHAQGGAGTAVGQALLGDIQEKRGQYLEAAKSYQAAVVLAPDREQYRIALALELVQHHTFEAAVAVLEQAIPR FPKSARLRVLLGVAQYAAGRYEDAEAALTDALELGPELEPVYGYLAQAALEAPSAPPERALKAICTREPIVCSVLKARSA RATGDAGLEAQAIAELKRAPKNNAMAHCELGRVYQAAAQWTEARVEFEACVQLDPSAQNHYRLGLVYNRLGLAELAVKQM ELRKAAEERGAEDTARRQSAVRAFQYLIK
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37419; Mature: 37419
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQAVQFARERRYAEARRLLESAVEPAGTTQRIAFHRLKAAVASGLGDTAAAVNEMRSAL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ALAPGDAGLQTATAAAELQAGLLDDAVAHAQGGAGTAVGQALLGDIQEKRGQYLEAAKSY HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC QAAVVLAPDREQYRIALALELVQHHTFEAAVAVLEQAIPRFPKSARLRVLLGVAQYAAGR CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC YEDAEAALTDALELGPELEPVYGYLAQAALEAPSAPPERALKAICTREPIVCSVLKARSA CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCC RATGDAGLEAQAIAELKRAPKNNAMAHCELGRVYQAAAQWTEARVEFEACVQLDPSAQNH CCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YRLGLVYNRLGLAELAVKQMELRKAAEERGAEDTARRQSAVRAFQYLIK EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MEQAVQFARERRYAEARRLLESAVEPAGTTQRIAFHRLKAAVASGLGDTAAAVNEMRSAL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ALAPGDAGLQTATAAAELQAGLLDDAVAHAQGGAGTAVGQALLGDIQEKRGQYLEAAKSY HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC QAAVVLAPDREQYRIALALELVQHHTFEAAVAVLEQAIPRFPKSARLRVLLGVAQYAAGR CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC YEDAEAALTDALELGPELEPVYGYLAQAALEAPSAPPERALKAICTREPIVCSVLKARSA CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCC RATGDAGLEAQAIAELKRAPKNNAMAHCELGRVYQAAAQWTEARVEFEACVQLDPSAQNH CCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YRLGLVYNRLGLAELAVKQMELRKAAEERGAEDTARRQSAVRAFQYLIK EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA