Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116621047

Identifier: 116621047

GI number: 116621047

Start: 2393946

End: 2394995

Strand: Direct

Name: 116621047

Synonym: Acid_1928

Alternate gene names: NA

Gene position: 2393946-2394995 (Clockwise)

Preceding gene: 116621042

Following gene: 116621050

Centisome position: 24.02

GC content: 65.33

Gene sequence:

>1050_bases
TTGGAGCAGGCTGTCCAGTTTGCGCGGGAGCGGCGTTATGCCGAAGCCCGTCGCTTGTTGGAGAGTGCGGTTGAGCCGGC
GGGAACCACACAGCGCATTGCGTTCCACCGGCTGAAAGCCGCGGTTGCGTCGGGATTGGGAGACACCGCGGCCGCCGTAA
ATGAAATGCGGTCGGCTCTTGCGCTCGCACCGGGAGATGCAGGTTTGCAGACGGCCACGGCTGCGGCCGAATTGCAGGCG
GGCCTGCTCGATGACGCGGTGGCGCACGCGCAGGGCGGAGCCGGCACGGCAGTGGGGCAGGCGCTGCTGGGCGATATCCA
GGAAAAACGCGGCCAGTATCTGGAAGCCGCCAAAAGCTACCAGGCGGCGGTTGTGCTCGCACCCGACCGCGAACAGTATC
GCATCGCGCTCGCGCTGGAGTTAGTACAGCACCACACTTTTGAGGCTGCCGTTGCGGTATTGGAGCAGGCCATCCCTCGG
TTCCCGAAATCGGCGCGGCTTCGTGTGTTGCTCGGCGTTGCCCAGTATGCCGCGGGCCGGTATGAGGACGCCGAAGCCGC
GCTGACCGACGCTCTAGAGCTAGGACCGGAACTGGAGCCGGTGTACGGCTACCTCGCACAGGCCGCACTGGAGGCGCCCT
CCGCACCTCCCGAGCGCGCACTGAAAGCGATCTGCACCCGCGAGCCCATCGTATGCAGCGTGCTCAAGGCCCGCTCGGCC
CGCGCGACGGGAGACGCCGGGTTGGAAGCCCAGGCAATCGCGGAACTGAAACGCGCGCCGAAAAATAACGCGATGGCACA
CTGCGAACTCGGCAGGGTCTATCAGGCCGCCGCTCAGTGGACCGAAGCACGCGTCGAATTCGAAGCGTGCGTCCAACTCG
ATCCGTCGGCGCAGAATCACTACCGCCTCGGATTGGTGTACAACCGTTTGGGCCTGGCCGAACTCGCGGTGAAGCAGATG
GAACTCCGCAAGGCCGCCGAGGAGCGCGGGGCCGAAGATACCGCCCGCCGGCAAAGCGCCGTCCGGGCATTTCAATATCT
CATCAAGTAA

Upstream 100 bases:

>100_bases
CAGTCTGGGTCAATTTGCCCAAGTTATCATAGTTGGTACGATCCGCTCGACTCTCATTTTCGCGCTGGCGACGGCGATCG
GAGCACTGGCCCAATCGCCG

Downstream 100 bases:

>100_bases
TCAGCGCTGCGGATTCTTGGGCAGGCTGATCAGGTTTGCGAAAATGCGGTAGGCGCCGGCTACGCCTTCGGGCAACTGGC
GGTAGAATGCGTAGGCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MEQAVQFARERRYAEARRLLESAVEPAGTTQRIAFHRLKAAVASGLGDTAAAVNEMRSALALAPGDAGLQTATAAAELQA
GLLDDAVAHAQGGAGTAVGQALLGDIQEKRGQYLEAAKSYQAAVVLAPDREQYRIALALELVQHHTFEAAVAVLEQAIPR
FPKSARLRVLLGVAQYAAGRYEDAEAALTDALELGPELEPVYGYLAQAALEAPSAPPERALKAICTREPIVCSVLKARSA
RATGDAGLEAQAIAELKRAPKNNAMAHCELGRVYQAAAQWTEARVEFEACVQLDPSAQNHYRLGLVYNRLGLAELAVKQM
ELRKAAEERGAEDTARRQSAVRAFQYLIK

Sequences:

>Translated_349_residues
MEQAVQFARERRYAEARRLLESAVEPAGTTQRIAFHRLKAAVASGLGDTAAAVNEMRSALALAPGDAGLQTATAAAELQA
GLLDDAVAHAQGGAGTAVGQALLGDIQEKRGQYLEAAKSYQAAVVLAPDREQYRIALALELVQHHTFEAAVAVLEQAIPR
FPKSARLRVLLGVAQYAAGRYEDAEAALTDALELGPELEPVYGYLAQAALEAPSAPPERALKAICTREPIVCSVLKARSA
RATGDAGLEAQAIAELKRAPKNNAMAHCELGRVYQAAAQWTEARVEFEACVQLDPSAQNHYRLGLVYNRLGLAELAVKQM
ELRKAAEERGAEDTARRQSAVRAFQYLIK
>Mature_349_residues
MEQAVQFARERRYAEARRLLESAVEPAGTTQRIAFHRLKAAVASGLGDTAAAVNEMRSALALAPGDAGLQTATAAAELQA
GLLDDAVAHAQGGAGTAVGQALLGDIQEKRGQYLEAAKSYQAAVVLAPDREQYRIALALELVQHHTFEAAVAVLEQAIPR
FPKSARLRVLLGVAQYAAGRYEDAEAALTDALELGPELEPVYGYLAQAALEAPSAPPERALKAICTREPIVCSVLKARSA
RATGDAGLEAQAIAELKRAPKNNAMAHCELGRVYQAAAQWTEARVEFEACVQLDPSAQNHYRLGLVYNRLGLAELAVKQM
ELRKAAEERGAEDTARRQSAVRAFQYLIK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37419; Mature: 37419

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQAVQFARERRYAEARRLLESAVEPAGTTQRIAFHRLKAAVASGLGDTAAAVNEMRSAL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALAPGDAGLQTATAAAELQAGLLDDAVAHAQGGAGTAVGQALLGDIQEKRGQYLEAAKSY
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QAAVVLAPDREQYRIALALELVQHHTFEAAVAVLEQAIPRFPKSARLRVLLGVAQYAAGR
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
YEDAEAALTDALELGPELEPVYGYLAQAALEAPSAPPERALKAICTREPIVCSVLKARSA
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCC
RATGDAGLEAQAIAELKRAPKNNAMAHCELGRVYQAAAQWTEARVEFEACVQLDPSAQNH
CCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YRLGLVYNRLGLAELAVKQMELRKAAEERGAEDTARRQSAVRAFQYLIK
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEQAVQFARERRYAEARRLLESAVEPAGTTQRIAFHRLKAAVASGLGDTAAAVNEMRSAL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALAPGDAGLQTATAAAELQAGLLDDAVAHAQGGAGTAVGQALLGDIQEKRGQYLEAAKSY
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QAAVVLAPDREQYRIALALELVQHHTFEAAVAVLEQAIPRFPKSARLRVLLGVAQYAAGR
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
YEDAEAALTDALELGPELEPVYGYLAQAALEAPSAPPERALKAICTREPIVCSVLKARSA
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCC
RATGDAGLEAQAIAELKRAPKNNAMAHCELGRVYQAAAQWTEARVEFEACVQLDPSAQNH
CCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YRLGLVYNRLGLAELAVKQMELRKAAEERGAEDTARRQSAVRAFQYLIK
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA