| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621007
Identifier: 116621007
GI number: 116621007
Start: 2346399
End: 2347328
Strand: Direct
Name: 116621007
Synonym: Acid_1888
Alternate gene names: NA
Gene position: 2346399-2347328 (Clockwise)
Preceding gene: 116621006
Following gene: 116621008
Centisome position: 23.54
GC content: 59.89
Gene sequence:
>930_bases ATGTTGCGCGCGCTTGCGATCTTTGGGGCCGGCTTTCTACTGCAGGCGCCGCCCTCCGCGAACGGACAGGCGTTCGATGT CGCCTCGGTAAAGCTGCTCGGCGCCGACGAGCGAAAGGTTCCTCTTTTTGCAGGCGGCCCGGACAGCAGCGATCCGGGAC GGCTTCATCTGCGCGTCAACATGTCTCTCTTGCTGGGAGCGGCCTTCGGCGTATCGGTGGATCAGATCAAGGGCCCGGCA TGGCTCCGGGATTTTTCGGCGATGCCCTTCTACGATATCGTCGCGACCATGCCCGCCAATAGCTCCAAGCGACAGGTGGA GAAGATGCTACAGAACCTGCTGGTGGAGCGATTCCACCTGGTCTTCCACCACGAAACTGGGAGCTTTCCGGGTTACGAAC TTGTGGTGGATAAGGGCGGTCCGAAACTAAAAGAGATCACTCCCGATTCCCTTCCTGCGGCTGATCCGCCGGTAGTGAGG GGCGCGCCGACGGGTTCCGATGGATTCCCGATTGTTCGCGGCCGGCGAACATCATCGTCGCGGTCGGGAACCGTGAACCA GCGGATCAAAGACCAGGAGTGGACGATGGCGGACCTCGCCCGGCAACTGGGATTCCTGATCGGAAGATCAGAGGGAAAAT CTCTCGACGACGGTTTTTTCCAGCCACGTGTCATCGACAAGACGGGCCTGACCGGAAAGTACACTTTCATCCTGGAGTTT GACTGTCCTGCCTGCGTTACTCCTGCGCCGGCTCTTCCGGCAAACCCGGACGGCGCCACCGCCGGCAACGGTATGGACGA TTCCCTCGGTTTTCCGAACATCTTCGCCGCCGTTCAAAAAGAGCTCGGCCTCCGGCTGATTAGGATCGCCGACGTGGAGA TGGACGTAATCGTCCTGGACGCTCTTAACCGAATCCCGATCGAGAATTGA
Upstream 100 bases:
>100_bases CCGGCCGGGGCTCGGTGTCACGTTCCGCGTGCCAGCCGCGAAGGCGCGGCTGGCGGAAGAGGATCGCGGCTTCTTCGACT AGGGCGTCGCACTGCAGCAT
Downstream 100 bases:
>100_bases CGTCAAAGGGCTTCCTCGCAGTGAGCTCTGGAACTATGATTGCTCACAAAATGTTGGCTACTGGGCTTTAGCGGTGAGGG GTTACCCCGGATGACAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MLRALAIFGAGFLLQAPPSANGQAFDVASVKLLGADERKVPLFAGGPDSSDPGRLHLRVNMSLLLGAAFGVSVDQIKGPA WLRDFSAMPFYDIVATMPANSSKRQVEKMLQNLLVERFHLVFHHETGSFPGYELVVDKGGPKLKEITPDSLPAADPPVVR GAPTGSDGFPIVRGRRTSSSRSGTVNQRIKDQEWTMADLARQLGFLIGRSEGKSLDDGFFQPRVIDKTGLTGKYTFILEF DCPACVTPAPALPANPDGATAGNGMDDSLGFPNIFAAVQKELGLRLIRIADVEMDVIVLDALNRIPIEN
Sequences:
>Translated_309_residues MLRALAIFGAGFLLQAPPSANGQAFDVASVKLLGADERKVPLFAGGPDSSDPGRLHLRVNMSLLLGAAFGVSVDQIKGPA WLRDFSAMPFYDIVATMPANSSKRQVEKMLQNLLVERFHLVFHHETGSFPGYELVVDKGGPKLKEITPDSLPAADPPVVR GAPTGSDGFPIVRGRRTSSSRSGTVNQRIKDQEWTMADLARQLGFLIGRSEGKSLDDGFFQPRVIDKTGLTGKYTFILEF DCPACVTPAPALPANPDGATAGNGMDDSLGFPNIFAAVQKELGLRLIRIADVEMDVIVLDALNRIPIEN >Mature_309_residues MLRALAIFGAGFLLQAPPSANGQAFDVASVKLLGADERKVPLFAGGPDSSDPGRLHLRVNMSLLLGAAFGVSVDQIKGPA WLRDFSAMPFYDIVATMPANSSKRQVEKMLQNLLVERFHLVFHHETGSFPGYELVVDKGGPKLKEITPDSLPAADPPVVR GAPTGSDGFPIVRGRRTSSSRSGTVNQRIKDQEWTMADLARQLGFLIGRSEGKSLDDGFFQPRVIDKTGLTGKYTFILEF DCPACVTPAPALPANPDGATAGNGMDDSLGFPNIFAAVQKELGLRLIRIADVEMDVIVLDALNRIPIEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33242; Mature: 33242
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRALAIFGAGFLLQAPPSANGQAFDVASVKLLGADERKVPLFAGGPDSSDPGRLHLRVN CCEEEEEECCCEEEECCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCEEEEEEE MSLLLGAAFGVSVDQIKGPAWLRDFSAMPFYDIVATMPANSSKRQVEKMLQNLLVERFHL HHEEEHHHHCCCHHHHCCCHHHHHCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHEE VFHHETGSFPGYELVVDKGGPKLKEITPDSLPAADPPVVRGAPTGSDGFPIVRGRRTSSS EEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCC RSGTVNQRIKDQEWTMADLARQLGFLIGRSEGKSLDDGFFQPRVIDKTGLTGKYTFILEF CCCCHHHCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCCCEEEEEEEEE DCPACVTPAPALPANPDGATAGNGMDDSLGFPNIFAAVQKELGLRLIRIADVEMDVIVLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEEEECCCEEEEEEE ALNRIPIEN CCCCCCCCC >Mature Secondary Structure MLRALAIFGAGFLLQAPPSANGQAFDVASVKLLGADERKVPLFAGGPDSSDPGRLHLRVN CCEEEEEECCCEEEECCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCEEEEEEE MSLLLGAAFGVSVDQIKGPAWLRDFSAMPFYDIVATMPANSSKRQVEKMLQNLLVERFHL HHEEEHHHHCCCHHHHCCCHHHHHCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHEE VFHHETGSFPGYELVVDKGGPKLKEITPDSLPAADPPVVRGAPTGSDGFPIVRGRRTSSS EEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCC RSGTVNQRIKDQEWTMADLARQLGFLIGRSEGKSLDDGFFQPRVIDKTGLTGKYTFILEF CCCCHHHCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCCCEEEEEEEEE DCPACVTPAPALPANPDGATAGNGMDDSLGFPNIFAAVQKELGLRLIRIADVEMDVIVLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEEEECCCEEEEEEE ALNRIPIEN CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA